mRNA_P-wetherbeei_contig147.5.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig147.5.2
Unique NamemRNA_P-wetherbeei_contig147.5.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: D8LIM0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM0_ECTSI)

HSP 1 Score: 374 bits (960), Expect = 1.270e-114
Identity = 245/543 (45.12%), Postives = 313/543 (57.64%), Query Frame = 1
Query:  418 LRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIGGGVHGDLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMG----------------------------LAVTGRAMVA--GCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGTAAVNVDASVGVGGAGTATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            +RMAGL+V++LY LDRR VLLKI LPR +LE VAE +R+++RR DGT+ RF+ +HR+SF  GG  GDLFR  ESQ++IDH++R KIKDGG+ELD+RT LG+ I KRMPLHN  RL  LY  WVVYW+      A                               XXXXXXXXXXXXXXXXXXXX                                +A T  +MV   G + QPLE +A+Y+GEA AFYFAWM FYT+ L++PS+ G++ FG Q+H+  LDHP  P+Y++F+M W+SA LV WRQRCSEL+Y     +F                                    C  G A +                RD   G++AV+                     A   FW V+LV P LYGI IPILY  CK++G++L  LEN++TE+KYRNALI+KVFSFRF+TVFAS+Y+YAFIS+ G  N+K+LRL ASL SFMT+GQWWYM WM Y+P  +    + KL+  V  ER++LE
Sbjct:    1 MRMAGLEVDKLYSLDRRHVLLKIRLPRIKLEEVAEVMRLKVRRRDGTIGRFKKDHRSSF-SGGTSGDLFRSGESQKVIDHLIRAKIKDGGSELDDRTELGKHICKRMPLHNQARLQALYDSWVVYWRGPSQQQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEWRTRSERLGERFEEAKEAVVAATRLSMVVLKGSMWQPLESIADYYGEATAFYFAWMGFYTQGLVIPSIFGLIVFGCQVHARTLDHPIMPIYAVFVMLWSSALLVLWRQRCSELAYSGCCYEFRTR---------------------------------CGWGEAQI-------------LVKRD---GSSAVD------------------KGMADPAFWAVMLVKPMLYGIMIPILYGLCKKLGVFLNNLENHKTENKYRNALIVKVFSFRFMTVFASLYHYAFISREGTPNYKLLRLAASLCSFMTIGQWWYMIWMCYIPGRVQNWKIGKLKAKVGAERKKLE 475          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: A0A482RUE1_9ARCH (Uncharacterized protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUE1_9ARCH)

HSP 1 Score: 365 bits (936), Expect = 3.740e-108
Identity = 221/590 (37.46%), Postives = 325/590 (55.08%), Query Frame = 1
Query:  262 LGRGFRPVSVRALQGMASQRLSAAAGAPAAPSAAPPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIGGGVHGDLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALG--TAAVNVDASVGVGGAGTATAAGGS------------------------DYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRL 1953
            +G GF   S    +G   +   +A     AP + P   FLGW SAGTQIW+RL++AGLDV+ +Y  D  +V+LK+  P  RLE +AE++RI+I+   G +  FR+  R+SFI  G  G++FR +E Q++ID+I+R+KI DGGAELDE T LG+ IV+R PLH  +RL E+   WV +W+ + P      + A G       ++  +  TY                                A + +   A  L+QPL+ +AEYFGE VAFYFA+MAFYTRWL+ PS++GV  F +Q+ +G  DH    +Y++ +M W    L  WRQ+ S L+Y+WGVLD+E EE  RPQF G    DD+TGE   +YP ++R+L Y  T P +   +  +LL+ML VF ++DR       A N+D +  +    ++     S                        +++   FW V    PSLYGI + IL    + I ++L   EN+ T++ + N LILKVF F+F+T+F S+YYY F ++   A +   R+  ++ S MTVG WW +    Y+P L HR  L ++R ++A   RR+
Sbjct:  167 VGGGFFSASSPVKRGGRGESAGSAGCGVGAPPSLPIAQFLGWNSAGTQIWARLKLAGLDVKVVYSYDLYRVILKLKCPAWRLEQMAEQMRIKIKTRGGYMKPFRVSRRDSFIPYGAMGNIFRSSERQQVIDYILRSKICDGGAELDEHTELGKFIVQRFPLHMYSRLQEIRHGWVTFWKRETP-----GQVAPGFSPFSSSYAETLQ-TY--------------------------------ATSVQYFFANILTQPLDNIAEYFGEGVAFYFAFMAFYTRWLVFPSILGVCVFAVQVTTGQSDHILCAIYAVLVMVWICFMLAFWRQKQSALAYKWGVLDYEVEETERPQFRGEYFEDDLTGEVHKHYPMYKRFLRYLITIPVIAAAIFVILLIMLTVFYSQDRLYNDYVHAKNIDLAPSLPVISSSIQQAASHVIYAMSTDSTNSTMLERRTISLDEFSDPEFWSVTFFYPSLYGILVSILNHVFEAIAIYLNEFENHRTQTTFINRLILKVFCFQFITIFTSLYYYLFFTKNHEAAYT--RISVTIFSLMTVGTWWNLVMDIYIPQLYHRTLLYRMRANIATHNRRI 716          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: A0A7S2EGT0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EGT0_9STRA)

HSP 1 Score: 332 bits (850), Expect = 2.540e-95
Identity = 213/566 (37.63%), Postives = 301/566 (53.18%), Query Frame = 1
Query:  364 PPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFI--GGGVHGD--------LFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSG---------PLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRAL----------GTAAVNVDASVG-VGGAGTATAA--GGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAG---GANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            P  +FLG++S+GTQIWSRLR AGL+  R+Y LD+++V++K+  P  RL  VAE LR++++  DG  A FR    + ++    GV  +        LFR +E Q IID I+R++I+D GAEL + T LG+ I  R+PLH   RL  LY  WV+YW+ K            G HSG            HS+      S  A  +                         A      V G L QPL+ + EYFGE VAFYFAW+   +  L   SV+G++ F +Q  +G  DHP  P +S+ +M W+   +V+WRQR + L+ RWG L++E EE  RPQF G  +R +IT E+V +YP W+RWL YC + P    F L V +L+L+V   RD  L          G      D S+G +G  G   +      +     FW +++ LP+L G+++P+L     ++ + L   ENY TES+YRN LI+KVFSFRFV  FAS+YYYA+ +           +LR+ ASL  ++T+  WW      Y P L+HR  +   R  + DE R LE
Sbjct:  776 PSDYFLGFKSSGTQIWSRLRQAGLETTRIYALDKKRVMIKLRCPPERLMDVAEVLRLKLKTRDGVYAPFRESMISQYLPTNDGVPRESYSSNPASLFRSSERQAIIDFIIRSRIRDSGAELGQGTDLGKKIHLRVPLHMHARLESLYEGWVLYWKMK---------NWVGGHSGYSMTVERDNSFEHSSLRSANSSSSAMPQRADSADDDSQTEFLLSEEENTPSIFA----RFVVGSLYQPLDSIEEYFGEKVAFYFAWLQHCSYHLTYMSVIGLIVFLIQAITGKWDHPIRPFFSIIVMIWSFYVMVTWRQRSNFLAQRWGTLNYEEEETTRPQFKGEYQRCEITKEWVIHYPSWKRWLKYCISLPLTAAFTLAVSILILVVHANRDILLARYFELKKNHGEVTTGFDFSIGAIGRQGPINSVDLNKENLQDPKFWFLVVGLPTLLGLSLPLLNFLLMKVSVTLNNFENYRTESEYRNHLIMKVFSFRFVCYFASLYYYAYFTNGTDEKSVESSILRVGASLFIYLTISNWWMFLLTIYFPLLIHRWRIYCERLKLRDELRCLE 1328          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: A0A835YQ07_9STRA (Calcium-activated chloride channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ07_9STRA)

HSP 1 Score: 310 bits (795), Expect = 8.340e-88
Identity = 220/558 (39.43%), Postives = 273/558 (48.92%), Query Frame = 1
Query:  334 AGAPAAPSAA--PPGF--FLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIGGGVHGDLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYG-------LWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGT----AAVNVDASVGVGGAGTATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLENG 1962
            A +P++P AA  PP    +LG  + G+Q+WSRL  AGL+VERLY  D+R                                             G+  DLFR  ESQ++IDHI+RT I +GGAEL ER+  G+SI  R+PLHN  +L  L+        +WV YW+P         R  YG  + P      +                               G    A T +A++  CLSQPL LV+ YFGEA+AFYFAWM +YT+WL+ PS+ GV FF LQ+  G LDHP GPLYSLFIM WA+ FL  W           GVL FEAEE+ RPQFVGRK   D TGE  P+       LVYC T P ++ F  GVL LML+VF  RD    T    + +N+                  D      WL LL+ P+L G+ IP+LYQ                            VFSFR  TVF SMYYYAF+    GA W M RLL SLLSFMTVGQWWYM WMTYV   + +    +L+  V  ++  LE G
Sbjct: 1033 AASPSSPPAAEAPPVLKNYLG-DTPGSQVWSRLVFAGLEVERLYHSDQRWA------------------------------------------DGLQLDLFRSCESQKVIDHIIRTTIVEGGAELTERSQPGKSIAARLPLHNRQQLDHLFKQLDQLVKVWVTYWKP---------RRNYGYANRPSSALGRM-----------------------------CSGCRDSARTFKALLRRCLSQPLLLVSVYFGEAIAFYFAWMGYYTKWLIPPSIAGVWFFSLQVRDGKLDHPVGPLYSLFIMAWATIFLAMW-----------GVLGFEAEEKTRPQFVGRKE-PDATGE--PH-------LVYCITAPLMIGFTGGVLTLMLVVFLNRDIVAATLPDGSLINLLPP---------------DIDDAKLWLALLLYPTLVGMCIPMLYQ----------------------------VFSFRLATVFLSMYYYAFVPNKHGAEWTMTRLLCSLLSFMTVGQWWYMTWMTYVYHRIGQWRQGRLKFGVKRDKSELEYG 1445          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: K0TEN3_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0TEN3_THAOC)

HSP 1 Score: 308 bits (788), Expect = 6.000e-87
Identity = 197/563 (34.99%), Postives = 295/563 (52.40%), Query Frame = 1
Query:  358 AAPPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFI---GGGVHGD--------LFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLS---QPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRD---DITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRAL------GTAAVNVDASVGVGGAGT---ATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFI----SQAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            A P  +FLG+ S GTQIWSRLR AGL+ +R+Y LD R+V+LK+  P  RLE VAE L+++++   G    FR +    F+    G V  +        LFR +E QRII  I+ +KI+D GAEL+    L +SI KR+PLH+  RL  LY  WV++W+ +                      N I                                 + L    + +   C+    QPL+ + +Y+GE +AFYFAW+   +  LL  SVVG+V F  Q+ SG  DHP  P +S+F+M W+   +V+WR+R + L+Y WG LD++ EE  RP+F G   +     ITG  +PYYP W+RWL+ C + P  V F +  LL +L+++  RD  L      G    N   S  V G      A            FWL+++  P++ G+A+P+L    +R+ LWL  +EN+ TE+++R   I+KVF+FRFV  FA++YYY+FI    S   G    ++R+ ++L +++T+  WW +    + P LLHR    + R  + ++ R LE
Sbjct:  697 APPSDYFLGYGSPGTQIWSRLRSAGLETQRVYALDTRRVMLKVRCPVDRLEDVAEALKLKLKTKSGDYVPFREDLITEFVPTDDGFVSCEDNVERVISLFRSSERQRIISFIMNSKIRDSGAELEPSERLSKSIQKRVPLHSHARLESLYSSWVLFWKKE----------------------NWID---------HEADRRRKKESIDAIEPLEAHDQVALKAPPQFLYRVCVGTFYQPLDEIEKYYGEKIAFYFAWIQHCSFHLLYLSVVGLVVFLCQLSSGEWDHPLRPWFSIFVMIWSFVVVVTWRRRSNHLAYNWGSLDYKEEELARPEFKGDPGKYVECPITGSPIPYYPPWKRWLMMCISIPLTVGFTILTLLGILIIYGNRDVMLANYFSSGDDTFNFSISTDVIGKKAPILAVELNQEHLHDPHFWLIIVGFPTVLGLALPLLNFCLRRLSLWLNEIENHRTEAEHRTNFIIKVFAFRFVCYFAALYYYSFIGVGDSDPHGTEQGIIRVASTLFTYITIAHWWNIFLQVFFPLLLHRWRTYRERLQLREQFRTLE 1228          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: B8BRZ9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BRZ9_THAPS)

HSP 1 Score: 306 bits (785), Expect = 1.690e-86
Identity = 191/552 (34.60%), Postives = 294/552 (53.26%), Query Frame = 1
Query:  358 AAPPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIGGGVHGD----LFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRD-DITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGT-----AAVNVDASVGVGGAGT-----ATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFI----SQAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            A P  +FLG+ S GTQIW RLR AGLD +R+Y LD R+V++K+  P  RL+ VAE L+++++  D           + F+    + +    LFR ++ Q+IID I+ ++I+D GAEL   T LG+ + +R+PLH+  RL  LY  WV+YW         +  T     S  +G +NH     S                               +V  R  V G   QPL+ + EY+GE +AFYFAW+   +  LL  SV G++ F  Q+ SGN DHP  P +S+F+M W+   +V+WR+R + L+++WG LD++ EE  RP F G + R   +T  +V YYP W+RWL  C + P    F L  LL +L+++  RD  L        A   D S  +   G      A        +   FWL+++  P+  G+ +P+L    +R+ LWL  +EN+ TE++YR A I+KVFSFRFV  FA++YYY+FI    +        ++R+ ++L +++T+  WW +    + P LL+R  + + R  + ++ R LE
Sbjct:  708 APPSDYFLGFSSPGTQIWGRLRQAGLDTQRVYALDTRKVMIKVRCPIDRLQDVAEALKLKLKTKDD----------DGFVSCDDYDEKVASLFRSSDRQKIIDFIIGSRIRDSGAELGPSTQLGKQVQRRVPLHSHARLEILYSCWVLYWN-------QSNWTDRDGKSLSVGATNHPTSPTSSTDKNNASKENETADHTDTLSTQTSQQAHIPSVFYRFFV-GSFYQPLDSIEEYYGEKIAFYFAWLQHCSFHLLYLSVAGLLVFICQLSSGNWDHPLRPWFSIFVMIWSFVVMVTWRKRSNFLAHQWGTLDYKEEEVPRPDFKGTEYRVCPVTNTYVMYYPPWKRWLKMCISIPLAFGFTLVTLLGILIIYGNRDVMLANYFASDGANKFDFSFSIEVVGKTAPILAVELNQQHLSDPDFWLIIIGFPTALGLLLPLLNFALRRVSLWLNDIENHRTEAEYRTAFIIKVFSFRFVCYFAALYYYSFIGVGQNDPQATEHGIVRVASTLFTYLTIAHWWNICLQVFFPLLLYRWRVYRERLHLKNQLRSLE 1241          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: B7G9W7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G9W7_PHATC)

HSP 1 Score: 301 bits (772), Expect = 8.130e-85
Identity = 189/556 (33.99%), Postives = 285/556 (51.26%), Query Frame = 1
Query:  364 PPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIG----------GGVHGDLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRAL----------GTAAVNVD---ASVGVGGAGTATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWK--MLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            P  +FLG++SAGT IWSRLR AGL+ +R+Y LD R+VL+K+  P  RL  VAE L++++R  +G  A FR +  + F              VH   FR +  Q IID I+ ++I+D GAEL + T +G+ I  R+PLH   ++  +Y  W  +W+ +            G     L H +     +S  + G                         +      +  GC  QPL+ + +YFGE VAFYFAW+      L+  S+ G + F LQ+ SG+ DHP  P YS+ +M W    L++W++R + L+YRWG LD++ +E  RP+F G   RD++TGE+V  YP+W+RW+ Y  + P  + F  G L+L+L V   RD  L          G+     +   +++G   A T             FW + + +P+L G+  P+L     ++ L L   ENY TES+YR  LI+KV SFRFV  FA +YYYAF+S       +  +LR+   +  + TV  WW +    Y P L+ +L +    + + +E R LE
Sbjct:  841 PSDYFLGFKSAGTSIWSRLRQAGLETQRVYSLDPRRVLIKVRCPSDRLMDVAEVLKLKLRSSEGGFAPFREDMMDMFKSTDDLTETPHIDNVHSFHFRSSIRQSIIDFIISSRIRDSGAELGQTTDVGKMIQSRVPLHMRAKVNSIYQTWTHFWKEE---------NWTGRDGCSLSHES-----FSDTSKGVEHDRFSFVSKSTCDTESGDSSEAAVPHLFVRIFKGCFYQPLDSIEQYFGEKVAFYFAWLQHTAGHLVWLSIFGFIMFLLQVGSGSWDHPLRPFYSVMVMIWTFTVLINWKKRANYLAYRWGTLDYKEQETTRPEFKGDYMRDEVTGEWVVTYPKWKRWVKYSISFPLTLLFTAGSLVLILWVHANRDLTLARYLDQKANPGSEKFQFNFAISAIGKEAAITDVQLSREHILDPTFWFITIGMPALLGLCQPLLNLLLMKLSLMLNDFENYRTESEYRTYLIIKVISFRFVCYFAHLYYYAFVSVGSTQAIENGILRVGTGVFVYTTVAHWWQIFLQIYFPILIRKLRMYYRDKRLCEELRDLE 1382          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: A0A7S3QEB7_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEB7_9STRA)

HSP 1 Score: 300 bits (768), Expect = 3.240e-84
Identity = 197/559 (35.24%), Postives = 290/559 (51.88%), Query Frame = 1
Query:  352 PSAAPPGFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSF-IGGGVHG-------DLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGTAAVNVDASVGV--------GGAGTATAAGGSDYASW-----GFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFIS----QAGGANWKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRL 1953
            P A P  FFLG+RS GTQIW RLR AGL+ +R+Y LD R+V++K+  P  RL  VAE LR++++ +DG  A FR +   +F I              LFR ++ QRI+D I+ ++I+D GA+L     LG++I+ R P+H   +L  +Y +WV +++                + G      +I                                ++      + ++ G   QPL+ V EYFGE VA YFAW+   +  L+L SV+G+  F  Q+ SG  DH   P +S  +  W+   LV+WR+R + L+YRWG  +++ EE  RPQF G  +R DITGE + YYPRW+RWL Y  + P  +   +  L  +LL +  RD  L     + DA  G+        G      A G  + +        FW ++   PSL G+++P++     +I   +   EN+ETES YRN LI+KV +FRFVT FA++YYYA+IS    QA   N  +LR+  SL+ ++TV  WW +    YVP L+ R  L + R  +  E R L
Sbjct: 1170 PKAPPSDFFLGFRSPGTQIWGRLRQAGLETDRIYALDTRRVMIKVRCPADRLMDVAEVLRLKMKTNDGYYATFREDMIEAFQIADDSESCLSKQGSSLFRSSDRQRILDFIINSRIRDSGAQLSGHNDLGKNIMCRAPIHMHAKLEAIYDVWVHFYR------------KCNWNKGKTSIETNIK-----------------------------DDLIPPPPFLKRLIVGSFYQPLDSVEEYFGEKVALYFAWLEHSSIHLILLSVLGLFAFLCQVVSGRFDHEIRPYFSFIVQIWSFFVLVTWRKRQNSLTYRWGSTNYKEEETPRPQFRGEYKRCDITGEVIAYYPRWKRWLKYLLSVPLTLSITVAALCGILLFYANRDVVLARYFSDPDADGGILYEVNWSLGALNQKEALGAVELSKEHLQDINFWYIVAGAPSLLGLSLPLMNFLLMQISRKMNDFENHETESHYRNGLIVKVIAFRFVTYFAALYYYAYISTGADQATVDN-SILRVATSLVIYLTVAHWWSIFLGVYVPLLILRWRLYRGRLKLKTELRSL 1686          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: A0A1Z5KN45_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KN45_FISSO)

HSP 1 Score: 298 bits (762), Expect = 1.620e-83
Identity = 193/558 (34.59%), Postives = 286/558 (51.25%), Query Frame = 1
Query:  352 PSAAPP--GFFLGWRSAGTQIWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFR---IEHRNSF------IGGGVHGDLFRVAES--QRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITGEFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGTAAVNVDASVGVGGAGTATAAGG--------SDYASWGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWK--MLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRRLE 1956
            P A PP   +FLG+RS GT IWSRLR AGL+ +R+Y LDRR V++KI  P  RL  VAE LR++++  DG+ A FR   IE  +        + G    D F+   +  Q IID IV ++I+D GAEL + T LG+ I  R+PLH   +L  ++  W  +W+ +           Y      L H   +P T     G                                    GC  QPL+ + +YFGE VAFYFAW+      L+L S++G + F  Q+ SGN DHP  P +++ +M W    L +WR+R + L++ WG +D++ +E  RPQF G   RD+ITGE+V  YP+W+RWL Y  + P  + F  G L+++L V + RD  L     +    + V G    T             +     FW +++ +P++ G+  P+L     ++ + L   ENY TES+YR+ LI+KVFSFRFV  F ++YYYAF+S     + +  +LR+ + +L + TV QWW        P L+  L  ++    +  E R +E
Sbjct:  864 PEARPPPSDYFLGFRSPGTSIWSRLRQAGLETQRVYALDRRSVMIKIRCPNDRLMDVAEVLRLKLKTRDGSFAPFREDMIEFYHDLNDPLEKLSGSCDPDGFQFPSAFRQTIIDFIVGSRIRDTGAELGQNTDLGKLIQARVPLHMPEKLDAIFNSWFYFWKKE---NFLDINPTY------LTHYKLLP-TDKRSQGNTIDKPTLRWY--------------------HRFFIGCFHQPLDSIEQYFGEKVAFYFAWLQHTASHLILLSIIGFILFLFQIGSGNWDHPLRPFFAMVVMLWTFTVLTNWRKRANYLAFTWGTMDYKEQEVARPQFYGDYIRDEITGEWVVTYPKWKRWLKYMISFPLTIIFTCGTLIIILWVHSNRDLQLVAYLNSNPEGMEVHGIDAITEKKQVVEVELTKENLLDPYFWYLVVGMPAMLGLCFPLLNFVLMKLSVCLNDFENYRTESEYRSFLIIKVFSFRFVCYFGTLYYYAFVSVGDKTSIQNGILRVASGVLVYTTVAQWWQNFVHVCFPMLIRHLRCKRRENVLTAELRAIE 1391          
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Match: W2R7Z5_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2R7Z5_PHYPN)

HSP 1 Score: 268 bits (686), Expect = 9.720e-76
Identity = 199/531 (37.48%), Postives = 265/531 (49.91%), Query Frame = 1
Query:  406 IWSRLRMAGLDVERLYGLDRRQVLLKIHLPRARLEAVAEKLRIRI-RRHDGTVARFRIEHRNSFIGGGVHGDL--FRVAESQRIIDHIVRTKIKDGGAELDERTTLG-RSIVKRMPLHNATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGGAGGRXXXXXXXXXXXXXXXXXXXXGIMGLAVTGRAMVAGCLSQPLELVAEYFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSLFIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRR---DDITGEFVP---YYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDR----ALGTAAVNVDASVGVGGAGTATAAGGSDYAS----WGFWLVLLVLPSLYGIAIPILYQGCKRIGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGANWK-----MLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRS 1929
            I SR+R  GL VERL  LD +Q LLK+  P+  LE  AE+LR+R  RR D     F  E R+SF           F  +E Q I+  ++     DGGA L+E   +  R +V+  PLH    L  L   WV +W+       T+  ++   H       +  P + S                                    A+V   L QPL+ VA+YFGE VAFYFAWM  YTRWL++PS  GV+ FGLQ+HS +LDHPA P+Y+LF+  W SAF+++WR+R + L+Y WG   +E EE  RP+F G   +   D    E  P   +Y  W+R L Y  T P V   ++ V+ L  L F+TRDR    +L T       +  V   GT T       A     W FW+ LL+ P LYG+ IP+L     R   +L   EN+ TES+Y++ LILKVFSFRFV VFAS+YYYAF   A           M+R+   L SFM  GQ W     T  P +  RL  +  +R+
Sbjct:  103 IVSRIRRTGLHVERLLSLDGKQSLLKVRAPQRVLELGAERLRLRKQRRFDKVWMVFSCELRSSFADFDPVRKCVNFLDSEKQSIVHALLTASEADGGAGLNESCPVAARYVVQMYPLHKQD-LTLLKTRWVTFWK-------TSLLSSKHQH-------DQAPQSKS----------------------------------RCAVVRSVLQQPLDDVAQYFGERVAFYFAWMEMYTRWLVVPSAAGVILFGLQVHSHHLDHPAAPVYALFMALWTSAFIIAWRRRAAALAYHWGTWGYEDEEVTRPEFYGDSSKPHDDKDVDEEKPVERHYVLWKRLLKYSVTFPCVAGSIVAVVTLAYLAFSTRDRLEAESLETKREAALIAEKVRQTGTITLEELQALAQLGVRWDFWIYLLLTPILYGLLIPVLDAAFTRAARFLNNWENHRTESRYQSHLILKVFSFRFVHVFASLYYYAFAPHAKDGEHAAKSDGMVRVAIQLASFMVTGQLWKNVMETLYPFVRRRLDARAKKRA 584          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig147.5.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIM0_ECTSI1.270e-11445.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482RUE1_9ARCH3.740e-10837.46Uncharacterized protein (Fragment) n=1 Tax=archaeo... [more]
A0A7S2EGT0_9STRA2.540e-9537.63Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]
A0A835YQ07_9STRA8.340e-8839.43Calcium-activated chloride channel-domain-containi... [more]
K0TEN3_THAOC6.000e-8734.99Uncharacterized protein (Fragment) n=1 Tax=Thalass... [more]
B8BRZ9_THAPS1.690e-8634.60Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
B7G9W7_PHATC8.130e-8533.99Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3QEB7_9STRA3.240e-8435.24Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A1Z5KN45_FISSO1.620e-8334.59Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
W2R7Z5_PHYPN9.720e-7637.48Uncharacterized protein n=1 Tax=Phytophthora paras... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig147contigP-wetherbeei_contig147:4637..7708 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LIM0
PFAMsAnoctamin
Model size1965
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.08e-115
EggNOG OGsKOG2513@1|root,KOG2513@2759|Eukaryota
Descriptionintracellular chloride channel activity
Cds size1962
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186030.737375-CDS-P-wetherbeei_contig147:4637..47531683186030.737375-CDS-P-wetherbeei_contig147:4637..4753Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig147 4638..4753 -
1683186030.7568789-CDS-P-wetherbeei_contig147:5051..51751683186030.7568789-CDS-P-wetherbeei_contig147:5051..5175Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig147 5052..5175 -
1683186030.7698298-CDS-P-wetherbeei_contig147:5420..58741683186030.7698298-CDS-P-wetherbeei_contig147:5420..5874Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig147 5421..5874 -
1683186030.7786865-CDS-P-wetherbeei_contig147:6187..69841683186030.7786865-CDS-P-wetherbeei_contig147:6187..6984Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig147 6188..6984 -
1683186030.787694-CDS-P-wetherbeei_contig147:7237..77081683186030.787694-CDS-P-wetherbeei_contig147:7237..7708Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig147 7238..7708 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig147.5.2prot_P-wetherbeei_contig147.5.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig147 4638..7708 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig147.5.2

>prot_P-wetherbeei_contig147.5.2 ID=prot_P-wetherbeei_contig147.5.2|Name=mRNA_P-wetherbeei_contig147.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=654bp
PPLPSSQPRSFAWADAAAPRSPEPPRWAAEVVRAARNRTSPPPSPSLPGL
AAVRAQDRTPPVSPGAGNAGVLGSASPGTRRSPTPSGLGRGFRPVSVRAL
QGMASQRLSAAAGAPAAPSAAPPGFFLGWRSAGTQIWSRLRMAGLDVERL
YGLDRRQVLLKIHLPRARLEAVAEKLRIRIRRHDGTVARFRIEHRNSFIG
GGVHGDLFRVAESQRIIDHIVRTKIKDGGAELDERTTLGRSIVKRMPLHN
ATRLAELYGLWVVYWQPKPPPAATAARTAYGAHSGPLGHSNHIPGTYSGG
AGGRGNAGGGTGGGNGGGGGNGRGGIMGLAVTGRAMVAGCLSQPLELVAE
YFGEAVAFYFAWMAFYTRWLLLPSVVGVVFFGLQMHSGNLDHPAGPLYSL
FIMGWASAFLVSWRQRCSELSYRWGVLDFEAEEQLRPQFVGRKRRDDITG
EFVPYYPRWRRWLVYCFTGPAVVCFVLGVLLLMLLVFTTRDRALGTAAVN
VDASVGVGGAGTATAAGGSDYASWGFWLVLLVLPSLYGIAIPILYQGCKR
IGLWLTRLENYETESKYRNALILKVFSFRFVTVFASMYYYAFISQAGGAN
WKMLRLLASLLSFMTVGQWWYMAWMTYVPALLHRLSLQKLRRSVADERRR
LENG
back to top

mRNA from alignment at P-wetherbeei_contig147:4637..7708-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig147.5.2 ID=mRNA_P-wetherbeei_contig147.5.2|Name=mRNA_P-wetherbeei_contig147.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3072bp|location=Sequence derived from alignment at P-wetherbeei_contig147:4637..7708- (Phaeothamnion wetherbeei SAG_119_79)
CCGCCACTGCCGTCGTCGCAGCCGCGGTCGTTCGCGTGGGCCGACGCGGC GGCGCCGCGGTCGCCGGAGCCGCCGCGCTGGGCGGCGGAAGTTGTCCGTG CGGCCAGGAATCGCACCTCCCCGCCACCATCCCCTTCCCTTCCGGGCCTC GCCGCCGTGAGGGCCCAGGACCGCACGCCGCCGGTGTCACCCGGCGCCGG CAACGCCGGTGTCCTCGGCAGCGCCAGCCCCGGAACCCGCCGGAGCCCGA CACCATCCGGCCTTGGCCGCGGCTTCCGGCCGGTCTCCGTGCGAGCGCTG CAGGGAATGGCCAGCCAGCGGCTGTCGGCGGCGGCGGGGGCACCGGCGGC GCCATCGGCGGCGCCGCCGGGGTTCTTTCTGGGGTGGCGGAGCGCCGGGA CGCAGATCTGGTCGCGGCTGCGGATGGCCGGGCTCGATGTGGAGCGCTTA TACGGCCTCGACAGGCGTCAGGTGTGTGGGAGGAGCGAGGGCTGTAGCTG CTAGTTTCGTGAGGGCGTGATTATTGTTTATAGTGCTTCTTCCTCCTCTT GCAACCGTGTTTTGAGAACCGTTGCTGGCTTCAATCATGCAGCGGGGTTA CATAGGCCTCTTTCGCTGCATTGTCGCTGCTCCCCTAACTTCACCTCTTT CGACCAGAGCAATCTCGCTTTTGACAAAAATATAATGCTTTCGTGCTCTT TTTCTGCTTTCTCTCTCTTTCCAGGTGCTGCTTAAGATCCACCTGCCGCG GGCGCGCCTCGAGGCCGTCGCCGAGAAGCTCCGTATCCGCATCCGCCGCC ACGATGGCACCGTCGCCCGCTTCCGCATCGAGCATCGCAATTCCTTCATC GGCGGCGGCGTCCATGGGGACCTCTTCCGAGTGGCCGAGTCGCAGCGCAT CATCGACCACATCGTGCGCACAAAGATCAAGGACGGCGGAGCTGAGCTGG ACGAGCGGACGACGCTCGGACGCAGCATCGTCAAGCGGATGCCGCTGCAC AACGCGACGCGCCTGGCGGAACTCTACGGGCTGTGGGTCGTGTACTGGCA GCCAAAGCCGCCGCCGGCAGCAACCGCTGCGCGGACGGCTTACGGCGCCC ACAGCGGCCCGCTGGGCCACTCCAACCACATCCCCGGTACGTACAGCGGC GGCGCCGGCGGCAGGGGCAACGCAGGCGGCGGCACTGGCGGCGGCAATGG CGGCGGCGGCGGCAACGGTCGCGGCGGCATTATGGGGCTGGCGGTGACGG GGCGGGCCATGGTGGCGGGCTGCCTGTCCCAGCCGCTGGAGCTCGTCGCC GAGTACTTTGGGGAGGCTGTCGCCTTCTACTTCGCCTGGATGGCCTTTTA CACGCGGTGGCTTTTGCTGCCGAGCGTCGTTGGCGTCGTCTTCTTTGGGC TTCAGATGCACTCGGGCAATCTGGATCACCCGGCGGGGCCGCTGTACTCG CTGTTCATCATGGGTTGGGCCTCCGCGTTCCTCGTCAGCTGGCGGCAGCG CTGCTCCGAGCTCTCGTACCGGTAAGAAGTGGGGTGCCAGGAAGGAGCTG CCGCTGTTCTGATCTCTCATTGACATCTGCTTATACTCTCTGCTGTTTAC TCCTGCTGGTGCTGCTTCTTGACCCAATGCGTGCTTCAAAGGTTGCAGCG GCTCGTGTCAACTGCTTTCGTCAGCTGCTTTCGTCAGCTGCTTGGATCCT GCTCAAAGCCTTCATTTCTCATGCTTCATCTGCTTTTCCTCCAGTAGTCA CTGGCAGCATTGCCGCTGACCGTTTCTTCCCCCCTTCCCTTCTCCAACAG TTGCAATCACCTCCCGCCCTTTCCTTGCTTACAGGTGGGGCGTGCTGGAC TTCGAGGCAGAGGAGCAGCTGCGGCCGCAATTCGTCGGCCGCAAGCGCCG CGACGACATCACCGGCGAGTTCGTGCCCTACTACCCCCGCTGGCGCCGCT GGCTCGTCTACTGCTTCACGGGGCCCGCCGTTGTCTGCTTCGTCCTGGGC GTGCTGCTCCTCATGCTGTTGGTCTTCACGACCCGCGACCGCGCGCTTGG CACCGCTGCGGTCAATGTGGACGCCAGCGTCGGCGTCGGCGGGGCGGGCA CGGCGACGGCGGCTGGCGGCAGTGACTATGCGAGCTGGGGCTTCTGGCTG GTGCTGCTGGTGCTGCCTTCGCTGTACGGTATCGCCATCCCAATCCTGTA CCAGGGCTGCAAGCGCATCGGGCTGTGGCTGACGCGTCTCGAGAACTACG AGACCGAGTCCAAGTACCGCAACGCCCTCATCCTCAAGGTAGCCTATGCA GTTTTAAACGGGGCAAAACGCGGGGGTGGCTGCGATTGCGGTAATGGCTG CGGCGGCGGTGGCGGCGGCGCCGGCGGCGGCTGCAACTGCGACGGTGGCA CCGGCAGTGTGAATCAGCACGAACCTTGTCGTCACCATTAACTAGTTCTA TTGTGGTCAGGTGGTATGATGTCCTCGATGATTCACCTCTTCTCCACTCC CCTCTCTTTCTCGCCGTCATTCGATTCCCTCAGGTGTTTAGCTTTCGGTT CGTGACGGTGTTTGCGTCTATGTACTACTACGCCTTCATCAGCCAGGCTG GCGGCGCCAACTGGAAGATGCTCCGACTCCTCGCCTCCCTGCTCTCCTTC ATGACTGGTGAAGAAGAAATCTATTTACATTGCTGATAGCGCGTTGAAAC CTGGTCTCTCTTGATGGCTGGTTGGTCCATCATGCTATGAGGCTCGCTTT GGGCAGCCTTCTTATCCCTGAAGACCTTTGTTGTTTGGCAGCATTCACAG CGGCACATAACCTGACATCCTTTCCGTCTCCATTCTCCTTTCTTCCCTCT CGCTAATCCCCGAACCTCAGTCTAACATTGAATAATTAACTCTCAGTGTC CTGCGCTCTCGTTTTCCGTTTCCTTCCCACCGCTCAAATCTCCTAATCCC TCCAGTCGGGCAGTGGTGGTACATGGCCTGGATGACCTATGTGCCGGCGT TGCTCCACCGCCTATCCCTCCAGAAGCTGCGCCGCTCCGTCGCCGACGAG CGCCGCCGCCTCGAGAATGGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig147:4637..7708-

>mRNA_P-wetherbeei_contig147.5.2 ID=mRNA_P-wetherbeei_contig147.5.2|Name=mRNA_P-wetherbeei_contig147.5.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1962bp|location=Sequence derived from alignment at P-wetherbeei_contig147:4637..7708- (Phaeothamnion wetherbeei SAG_119_79)
CCGCCACTGCCGTCGTCGCAGCCGCGGTCGTTCGCGTGGGCCGACGCGGC
GGCGCCGCGGTCGCCGGAGCCGCCGCGCTGGGCGGCGGAAGTTGTCCGTG
CGGCCAGGAATCGCACCTCCCCGCCACCATCCCCTTCCCTTCCGGGCCTC
GCCGCCGTGAGGGCCCAGGACCGCACGCCGCCGGTGTCACCCGGCGCCGG
CAACGCCGGTGTCCTCGGCAGCGCCAGCCCCGGAACCCGCCGGAGCCCGA
CACCATCCGGCCTTGGCCGCGGCTTCCGGCCGGTCTCCGTGCGAGCGCTG
CAGGGAATGGCCAGCCAGCGGCTGTCGGCGGCGGCGGGGGCACCGGCGGC
GCCATCGGCGGCGCCGCCGGGGTTCTTTCTGGGGTGGCGGAGCGCCGGGA
CGCAGATCTGGTCGCGGCTGCGGATGGCCGGGCTCGATGTGGAGCGCTTA
TACGGCCTCGACAGGCGTCAGGTGCTGCTTAAGATCCACCTGCCGCGGGC
GCGCCTCGAGGCCGTCGCCGAGAAGCTCCGTATCCGCATCCGCCGCCACG
ATGGCACCGTCGCCCGCTTCCGCATCGAGCATCGCAATTCCTTCATCGGC
GGCGGCGTCCATGGGGACCTCTTCCGAGTGGCCGAGTCGCAGCGCATCAT
CGACCACATCGTGCGCACAAAGATCAAGGACGGCGGAGCTGAGCTGGACG
AGCGGACGACGCTCGGACGCAGCATCGTCAAGCGGATGCCGCTGCACAAC
GCGACGCGCCTGGCGGAACTCTACGGGCTGTGGGTCGTGTACTGGCAGCC
AAAGCCGCCGCCGGCAGCAACCGCTGCGCGGACGGCTTACGGCGCCCACA
GCGGCCCGCTGGGCCACTCCAACCACATCCCCGGTACGTACAGCGGCGGC
GCCGGCGGCAGGGGCAACGCAGGCGGCGGCACTGGCGGCGGCAATGGCGG
CGGCGGCGGCAACGGTCGCGGCGGCATTATGGGGCTGGCGGTGACGGGGC
GGGCCATGGTGGCGGGCTGCCTGTCCCAGCCGCTGGAGCTCGTCGCCGAG
TACTTTGGGGAGGCTGTCGCCTTCTACTTCGCCTGGATGGCCTTTTACAC
GCGGTGGCTTTTGCTGCCGAGCGTCGTTGGCGTCGTCTTCTTTGGGCTTC
AGATGCACTCGGGCAATCTGGATCACCCGGCGGGGCCGCTGTACTCGCTG
TTCATCATGGGTTGGGCCTCCGCGTTCCTCGTCAGCTGGCGGCAGCGCTG
CTCCGAGCTCTCGTACCGGTGGGGCGTGCTGGACTTCGAGGCAGAGGAGC
AGCTGCGGCCGCAATTCGTCGGCCGCAAGCGCCGCGACGACATCACCGGC
GAGTTCGTGCCCTACTACCCCCGCTGGCGCCGCTGGCTCGTCTACTGCTT
CACGGGGCCCGCCGTTGTCTGCTTCGTCCTGGGCGTGCTGCTCCTCATGC
TGTTGGTCTTCACGACCCGCGACCGCGCGCTTGGCACCGCTGCGGTCAAT
GTGGACGCCAGCGTCGGCGTCGGCGGGGCGGGCACGGCGACGGCGGCTGG
CGGCAGTGACTATGCGAGCTGGGGCTTCTGGCTGGTGCTGCTGGTGCTGC
CTTCGCTGTACGGTATCGCCATCCCAATCCTGTACCAGGGCTGCAAGCGC
ATCGGGCTGTGGCTGACGCGTCTCGAGAACTACGAGACCGAGTCCAAGTA
CCGCAACGCCCTCATCCTCAAGGTGTTTAGCTTTCGGTTCGTGACGGTGT
TTGCGTCTATGTACTACTACGCCTTCATCAGCCAGGCTGGCGGCGCCAAC
TGGAAGATGCTCCGACTCCTCGCCTCCCTGCTCTCCTTCATGACTGTCGG
GCAGTGGTGGTACATGGCCTGGATGACCTATGTGCCGGCGTTGCTCCACC
GCCTATCCCTCCAGAAGCTGCGCCGCTCCGTCGCCGACGAGCGCCGCCGC
CTCGAGAATGGC
back to top