mRNA_P-wetherbeei_contig1469.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A6H5JDK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDK4_9PHAE) HSP 1 Score: 172 bits (435), Expect = 2.820e-46 Identity = 86/202 (42.57%), Postives = 127/202 (62.87%), Query Frame = 1
Query: 493 QLGICEKGSACFPELARANRSLDELWPDDSTDLRHRRVHNEAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKD--ASEVEQWPEDNTYVNHWAQPTYMAHMPYALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
+ +C GS+C E RAN +L+++W ++ + +R+++E R+ N QP VPKFT+ G+K ++ T+A L +Y + + A E+W DNTYVNHW T M P + +R+ DL P+ME+WSG +L++T+CYGVR Y RGSILA HVDRV THVIS IIN + VD DW LY + H+ + + PG+++
Sbjct: 40 EFAVCNVGSSCRGEYNRANGTLNKMWQEE-IGIVWKRINSERSRVMLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHSQMENKAPVTEKWAPDNTYVNHWEVDTKMTAAPTRIHRRLYQDLLPVMEEWSGIKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIIN--ENVDTDWGLYVRGHDGVARDLFIEPGEII 238
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: D7FHL7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHL7_ECTSI) HSP 1 Score: 164 bits (414), Expect = 1.830e-43 Identity = 81/174 (46.55%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 493 QLGICEKGSACFPELARANRSLDELWPDDSTDLRHRRVHNEAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASE--VEQWPEDNTYVNHWAQPTYMAHMPYALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQ 1008
+ +C GS+C E RAN +L+++WP++ T + +R++ E R+K N QP VPKFT+ G+K ++ T+A L +Y + E+W DNTYVNHW T M P + +R+ DL P+ME+WSG +L++T+CYGVR Y RGSILA HVDRV THVIS IINV+Q
Sbjct: 40 EFAVCNVGSSCRDEYNRANGTLNKMWPEE-TGIAPKRINGERNRVKLNEYQPVTVPKFTELGYKKEKLNPDTYAYLMEWYHGQMENKMPVTEKWALDNTYVNHWEVGTKMTTAPMRIHRRLYQDLLPVMEEWSGTKLKSTACYGVRHYYRGSILANHVDRVDTHVISAIINVEQ 212
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A7S2UT49_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT49_9STRA) HSP 1 Score: 161 bits (408), Expect = 1.170e-40 Identity = 74/161 (45.96%), Postives = 108/161 (67.08%), Query Frame = 1
Query: 619 QRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMPY--ALRQRVLNDLRPIMEKWSG-EELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
+RI++N E P+ VP FT+ GF+ R P + + +Y ANK+ + +E W + NTY NH+ PTYM H+P ++ + L+P +E+WSG +ELE T+CYG+R Y+ G+ L HVDR+STH IS IINV Q+V+E W L+ DH+ + H +TM PGD+V
Sbjct: 280 ERIRHNKEHPSIVPHFTEVGFEKVRTPPDVWEMIQTYYHANKEHTALEVWDDSNTYTNHFESPTYMIHLPENGRMKPEIFRRLQPYLEEWSGVDELEGTACYGIRVYQEGAELRGHVDRISTHAISVIINVDQDVEEPWYLHIYDHSGSAHNVTMAPGDMV 440
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A7S1E9L9_HEMAN (Hypothetical protein n=4 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E9L9_HEMAN) HSP 1 Score: 145 bits (366), Expect = 8.720e-34 Identity = 76/170 (44.71%), Postives = 107/170 (62.94%), Query Frame = 1
Query: 604 VHNEAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMP-------YALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
++ E QR+ ++QPA+ +T+ GF RVP++ + + F+ A +D VE W E NT+ NHWA PTYMA++ AL+Q++L++++PI+E+W+G L+ S YGVR YK SILA HVDR V S IINV Q+VDEDW L H+ + ITM GDLV
Sbjct: 427 MNTENQRVSLLLDQPAQSLNYTRLGFAKRRVPDSVWPQIQEFWKAIQDKDSVEVWNEGNTFTNHWASPTYMANLEDQRFPGGVALKQKILDEIKPILERWTGLRLKHVSTYGVRVYKTDSILAPHVDR-DPLVTSAIINVAQDVDEDWPLEVVGHDGNAYNITMKAGDLV 595
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A6H5KTG8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTG8_9PHAE) HSP 1 Score: 138 bits (347), Expect = 2.930e-32 Identity = 70/169 (41.42%), Postives = 105/169 (62.13%), Query Frame = 1
Query: 592 RHRRVHNEAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMPY--ALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
R+ R + R+ N +QP +P+FT+ GFK T VP+ + + +Y NK++ + E+W ++N + N+ P+YM ++P L++++ LRPI+E+WSG EL T+CYGVR Y S LA HVD +TH +S I+ V Q+V+EDW L DH + ITM P DLV
Sbjct: 259 RNARKQMDQGRLVNNRKQPEGLPRFTEVGFKKTTVPDDVWDLVKTYYEENKESPKKEKWSKNNVFTNNVEAPSYMVNLPENGKLKEQIFGGLRPILEEWSGVELVQTACYGVRVYTNTSWLANHVDTKATHAVSVIMQVDQDVEEDWPLMIYDHAGNDYNITMKPRDLV 427
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: B5YN86_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YN86_THAPS) HSP 1 Score: 131 bits (330), Expect = 3.590e-30 Identity = 76/216 (35.19%), Postives = 114/216 (52.78%), Query Frame = 1
Query: 613 EAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMPYA--------LRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLVSTSFSERNVRLRAAHGQILGVSHPLAKDTS*PPFAISRP*SFIVRVLK 1236
E R ++ QPA + +T GFK R P F L+ ++ N + E+WP NTYVN+W PTYM ++ L+Q++ + ++P++E+W+G ELE +S YG+R Y RG+IL+ H DR+ + S IINV Q+V+EDW L + + +TM PGD+V L +H I G PL + F RP ++R K
Sbjct: 78 EEDRYAMSLRQPASMQNYTDVGFKKVRAPAEVFNLLSNYWDTNLRRRQQEKWPTGNTYVNYWKAPTYMVNVENTNLRSGGQLLKQKIWDGVKPVLEEWTGMELEQSSMYGIRQYTRGAILSPHADRMPL-ISSCIINVAQDVEEDWPLEVYGRDGLAYNVTMSPGDMV----------LYESHSLIHGRPFPLQGEYFANIFIHFRPTGKLLRERK 282
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A7R9W969_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W969_9STRA) HSP 1 Score: 131 bits (329), Expect = 4.780e-30 Identity = 69/168 (41.07%), Postives = 94/168 (55.95%), Query Frame = 1
Query: 613 EAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMP--------YALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
E R+ ++ QP V +T GFK R PE L ++ NK+ +VEQW TY NHW PTYM + +L+ ++ N RP +E+W+G EL TS YG+R Y G+ILA HVDR+ + S IINV Q+VDEDW L + + +TM PGD+V
Sbjct: 67 EKDRLAMSIRQPQSVMNYTDTGFKKVRAPEELRKLLENYWNENKEKKKVEQWSTGYTYTNHWEAPTYMVSIEDGGLRGGGNSLKHKLWNAARPTIEEWTGMELAPTSLYGIRVYTEGAILAPHVDRIPL-ISSAIINVAQDVDEDWPLEVYGRDGMAYNVTMKPGDMV 233
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: A0A7S4UF91_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4UF91_9EUKA) HSP 1 Score: 129 bits (324), Expect = 8.450e-30 Identity = 63/165 (38.18%), Postives = 94/165 (56.97%), Query Frame = 1
Query: 601 RVHNEAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMPYALRQRVLNDLRPIMEKW--SGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDL 1089
R E +R N EQP P FTK G++V ++ F+ L F+ N+ +VE N ++NHW PTY+ +P LR +V+ ++P++E W G LE TS YG+R Y S L HVDR +TH +S II + Q V+EDWLL H++ + + ++PG +
Sbjct: 161 RAREEKRRQYLNKEQPKITPTFTKIGYEVRQLDPQLFSELKTFWEENRHKIQVEHLGMTNHHMNHWEVPTYIISLPAQLRNKVIATVKPVLEDWIGGGYNLEYTSLYGIRMYVNNSYLLNHVDRSATHAVSAIIQIDQRVNEDWLLEVIGHDKKVRHVKLLPGQM 325
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: B8BQJ9_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BQJ9_THAPS) HSP 1 Score: 130 bits (326), Expect = 1.180e-29 Identity = 72/192 (37.50%), Postives = 109/192 (56.77%), Query Frame = 1
Query: 562 ELWPDDSTDLRH---RRVHN----EAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDASEVEQWPEDNTYVNHWAQPTYMAHMP--------YALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKDHNRTIHQITMVPGDLV 1092
+L+ D T R +R H+ E R++ ++ QPA + +T+ GFK R P F L ++ N D E+W NTYVNHWA T+M ++ AL+Q++ + ++P++E+W+G EL +S YG+R Y RG+IL+ H DR+ + S IINV Q V+EDW L + + +TM PGDLV
Sbjct: 58 QLYDDFMTGCRQYYGKRGHSCDVTEEDRVEMSLRQPASMQNYTETGFKKVRAPADVFKLLKDYWDDNHDRKTKEEWYTGNTYVNHWAANTFMTNVESTSLPGGGQALKQKIWDGVKPLLEEWTGMELRPSSMYGIREYTRGAILSPHADRMPL-ISSCIINVAQNVEEDWPLEVFGRDGLAYNVTMEPGDLV 248
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Match: B5Y3R3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3R3_PHATC) HSP 1 Score: 127 bits (320), Expect = 8.860e-29 Identity = 73/171 (42.69%), Postives = 102/171 (59.65%), Query Frame = 1
Query: 613 EAQRIKYNVEQPARVPKFTKEGFKVTRVPEATFAALAAFYAANKDA--SEVEQWPEDNTYVNHWAQPTYMAHMP--------YALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDRVSTHVISGIINVQQEVDEDWLLYAKD-HNRTIHQITMVPGDLV 1092
E RI+ ++ QP + +T+ GFK R P+ L A + NK+ E WP N YVNHWA PTYM+ + YAL++ V + ++P++E W+G E + S YG+R+Y G+IL HVDR+ V S IINV Q+VDEDW L D H+R ++ +TM PGDLV
Sbjct: 75 EDDRIEMSLRQPQSMVNYTETGFKKVRAPKNVMDLLNAHWKRNKEGLFDREEIWPAGNVYVNHWASPTYMSSVEDTNTRGGGYALKKAVWDAVKPVIESWTGMEQKPISMYGIRAYTDGAILNPHVDRLPL-VSSCIINVDQDVDEDWPLEVYDRHDRAVN-VTMQPGDLV 243 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1469.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1469.4.1 >prot_P-wetherbeei_contig1469.4.1 ID=prot_P-wetherbeei_contig1469.4.1|Name=mRNA_P-wetherbeei_contig1469.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp MAHMPYALRQRVLNDLRPIMEKWSGEELEATSCYGVRSYKRGSILAVHVDback to top mRNA from alignment at P-wetherbeei_contig1469:2867..5026+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1469.4.1 ID=mRNA_P-wetherbeei_contig1469.4.1|Name=mRNA_P-wetherbeei_contig1469.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2160bp|location=Sequence derived from alignment at P-wetherbeei_contig1469:2867..5026+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1469:2867..5026+ >mRNA_P-wetherbeei_contig1469.4.1 ID=mRNA_P-wetherbeei_contig1469.4.1|Name=mRNA_P-wetherbeei_contig1469.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig1469:2867..5026+ (Phaeothamnion wetherbeei SAG_119_79)back to top |