mRNA_P-wetherbeei_contig14669.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14669.1.1
Unique NamemRNA_P-wetherbeei_contig14669.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14669.1.1 vs. uniprot
Match: D7FIT2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIT2_ECTSI)

HSP 1 Score: 104 bits (259), Expect = 9.720e-24
Identity = 56/109 (51.38%), Postives = 78/109 (71.56%), Query Frame = 2 
Query:   92 PDLKAAEAEAKRLTEEHGRTSPQAAAAWDAFEEMAAADNSIAMRPGLDESCEVENSALCAEYEAQMEELESIINASKPSLVTSLKQLAEANRKLLEENSRLRRSLSAYK 418
            P+++  +A A + T+E G TSP+A  AWD +EE+AAADN+IA R  LDE C+V N  +C EY+ QM+ELE I+ A   ++  S++QLA+ N  L+EENSRL+ SLS YK
Sbjct:   47 PEIEVPKAAALKATKEFGATSPEARLAWDTYEEVAAADNTIATRATLDEDCDVTNENVCEEYQDQMKELEEILAAGPAAMNISVEQLAKQNMILIEENSRLKASLSTYK 155
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BLAST of mRNA_P-wetherbeei_contig14669.1.1 vs. uniprot
Match: A0A835Z6A4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6A4_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.140e-21
Identity = 58/113 (51.33%), Postives = 78/113 (69.03%), Query Frame = 2 
Query:   80 MMATPDLKAAEAEAKRLTEEHGRTSPQAAAAWDAFEEMAAADNSIAMRPGLDESCEVENSALCAEYEAQMEELESIINASKPSLVTSLKQLAEANRKLLEENSRLRRSLSAYK 418
            M    D+  AE  A    +++G  SP+AA AWD +EE+AA+DN+ A RPGLDE C+ E S  C+++EAQM EL++II   K   VT+   +A+ N+KL+EEN RLRRSLSAYK
Sbjct:    1 MALNDDITRAEEAALAAVKKYGAKSPEAANAWDEYEEIAASDNTAAFRPGLDEGCDTEASQECSDFEAQMAELQAIIE--KGEAVTTDALVAQ-NKKLIEENQRLRRSLSAYK 110
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14669.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FIT2_ECTSI9.720e-2451.38Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z6A4_9STRA1.140e-2151.33Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14669contigP-wetherbeei_contig14669:67..1690 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G165
Preferred namepfk
PFAMsPFK
Model size938
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00017
KEGG koko:K00850,ko:K01412
KEGG ReactionR00756,R03236,R03237,R03238,R03239,R04779
KEGG Pathwayko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230
KEGG ModuleM00001,M00345
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0003674,GO:0003824,GO:0003872,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005777,GO:0005829,GO:0005886,GO:0005975,GO:0006082,GO:0006090,GO:0006091,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0008443,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009507,GO:0009536,GO:0009653,GO:0009888,GO:0009987,GO:0010015,GO:0010053,GO:0016020,GO:0016052,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0017076,GO:0017144,GO:0018130,GO:0019200,GO:0019359,GO:0019362,GO:0019363,GO:0019438,GO:0019439,GO:0019637,GO:0019693,GO:0019752,GO:0020015,GO:0022622,GO:0030154,GO:0030554,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0035639,GO:0036094,GO:0042579,GO:0042866,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046835,GO:0046939,GO:0048364,GO:0048731,GO:0048856,GO:0048869,GO:0051186,GO:0051188,GO:0055086,GO:0061615,GO:0071704,GO:0071944,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:0090558,GO:0090627,GO:0097159,GO:0097367,GO:0099402,GO:1901135,GO:1901137,GO:1901265,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1905392
Exons2
Evalue1.82e-09
EggNOG OGsCOG0205@1|root,KOG2440@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-20_003010.1
EC2.7.1.11,3.4.24.64
Description6-phosphofructokinase activity
Cds size378
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01009,ko03019,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186029.5881827-UTR-P-wetherbeei_contig14669:66..1091683186029.5881827-UTR-P-wetherbeei_contig14669:66..109Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14669 67..109 +
1683186029.6166785-UTR-P-wetherbeei_contig14669:1173..16901683186029.6166785-UTR-P-wetherbeei_contig14669:1173..1690Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14669 1174..1690 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186029.600577-CDS-P-wetherbeei_contig14669:109..3131683186029.600577-CDS-P-wetherbeei_contig14669:109..313Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14669 110..313 +
1683186029.6076884-CDS-P-wetherbeei_contig14669:999..11731683186029.6076884-CDS-P-wetherbeei_contig14669:999..1173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14669 1000..1173 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14669.1.1prot_P-wetherbeei_contig14669.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14669 110..1173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14669.1.1

>prot_P-wetherbeei_contig14669.1.1 ID=prot_P-wetherbeei_contig14669.1.1|Name=mRNA_P-wetherbeei_contig14669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=126bp
MMPLAPVRSGLRMMATPDLKAAEAEAKRLTEEHGRTSPQAAAAWDAFEEM
AAADNSIAMRPGLDESCEVENSALCAEYEAQMEELESIINASKPSLVTSL
KQLAEANRKLLEENSRLRRSLSAYK*
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mRNA from alignment at P-wetherbeei_contig14669:67..1690+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14669.1.1 ID=mRNA_P-wetherbeei_contig14669.1.1|Name=mRNA_P-wetherbeei_contig14669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig14669:67..1690+ (Phaeothamnion wetherbeei SAG_119_79)
TGCGGCTGCTCTTGTTGTTGGCTTGACCTGCGCCTCAGCGTTCATGATGC
CGCTGGCGCCGGTGCGGAGCGGGCTGCGGATGATGGCCACGCCGGACTTG
AAGGCCGCGGAGGCCGAAGCGAAGCGGCTGACGGAGGAGCACGGCAGGAC
TTCCCCGCAGGCCGCGGCGGCGTGGGATGCCTTTGAGGAGATGGCGGCCG
CGGACAACTCGATCGCGATGCGGCCGGGACTCGACGAATCCTGCGAGGTG
AGCTTCTCGTTCCTGGTGTTTAGACGCGGCGGGATCTTTTCCTCCTGGTT
GTCCGTACTTTTCCGAATCCAACCTCTTTTCCCTCTTTGCCTTCCTTTGT
GAACGGAGCATGATTTGAGGATATCTCTCTTGCACCCTCGTCGGCGTCGG
AAGCGCAGTTGCTGTCCGTTATCACCCTGCGGATACGAATGAAATAATAA
GCACAACCAATTGAATCTGTTTTGCCTGCGAACTTTGAGAGAGGCATCAT
ATTTGACGCGTCAGCGGCATCTAAACGCCGCAATTTAAGTCGTCATGCTG
TTGTGAAGCAATCTTTCAAGAAAGTGTTTTCGGGAGGCGCTGATGTTATG
TGACGTGCTATCTCTTTTTGAAGCTCTCATGCAAAAGAGCTAAACTTGTG
TTTATTCTCTACTCTTCAGCGCCATCGCCGCCATGTTTGCTTGAAAACCT
GACCGCAGGGCTCGCGTCCTTCCGTCCCACCCCCGCCGCTGCTGCTCTTC
CATGCCGTCACGTCGACTGCCACCCAACACTTTCACCGTCCACCACTCCT
TCCGTCCATCTGGCTAACCCCGTTTCGTCTCGCCATTTCGCGCCGTTTCT
TTCCGCTGGTTCGTCTCGCCGTTTCATTCTTCTCCTGTGCCATTTTCGCT
CATCCTTCCGCCTTTTGTCGAACAAAACCCCAGGTGGAGAACTCTGCGCT
GTGCGCCGAGTACGAGGCGCAGATGGAGGAGCTCGAGTCCATCATTAATG
CCAGCAAGCCGTCGCTCGTCACGTCGCTCAAGCAGCTCGCCGAGGCCAAC
CGGAAGCTGCTCGAGGAGAACTCCCGCCTCCGCCGCTCCCTCTCCGCCTA
CAAGTAGAATCATTCTGCTTGTCGCACGCAGAGAAATCTGCCAGCAGGTC
GAGAAACGGAGAAGAGTTGTGGAGGGTGCTGGGAAGGCGCGAATCGGAGC
GGCGGGTTGGAGGGTTGGAAGAGAGCGTCAGGAAGGTTGCTTTCCGCTCT
TCGTCTCCGCCGGCCCGTCCTCCGGGAGCGCCGGAGCGGGCGGGTCGGGT
CAGACCGGCGTTGTCAGGCCGACCCGGGCGCTGGCGGCGGGCCGGGCAGC
GGTGGTGGCGGCGGCGTGCCGGGCTGCATGCCGGCCATTTTGCTTTCAAG
GTCCGGTGGGCCGCCTGGTGTGTCGTGGCCGTCGCATCACTGCGTGTCGA
TGGCAGCAGCGCGCCGCCGCCGATAGCGGCGATGGCGGAGGCAGCTTTTG
AAGTTCTTCGCTTAGCGACGGGCACACGCCGTGCATGTTTCGGCGTAGGC
GCAGACGTTCTTCAGGACGTCGTTTACCGCGGCGCACTGCCGCGTCTTCT
CGGGAGGCCGCGGCGGCTGGTCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14669:67..1690+

>mRNA_P-wetherbeei_contig14669.1.1 ID=mRNA_P-wetherbeei_contig14669.1.1|Name=mRNA_P-wetherbeei_contig14669.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=378bp|location=Sequence derived from alignment at P-wetherbeei_contig14669:67..1690+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGCCGCTGGCGCCGGTGCGGAGCGGGCTGCGGATGATGGCCACGCC
GGACTTGAAGGCCGCGGAGGCCGAAGCGAAGCGGCTGACGGAGGAGCACG
GCAGGACTTCCCCGCAGGCCGCGGCGGCGTGGGATGCCTTTGAGGAGATG
GCGGCCGCGGACAACTCGATCGCGATGCGGCCGGGACTCGACGAATCCTG
CGAGGTGGAGAACTCTGCGCTGTGCGCCGAGTACGAGGCGCAGATGGAGG
AGCTCGAGTCCATCATTAATGCCAGCAAGCCGTCGCTCGTCACGTCGCTC
AAGCAGCTCGCCGAGGCCAACCGGAAGCTGCTCGAGGAGAACTCCCGCCT
CCGCCGCTCCCTCTCCGCCTACAAGTAG
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