mRNA_P-wetherbeei_contig14655.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14655.1.1
Unique NamemRNA_P-wetherbeei_contig14655.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: D8LRH4_ECTSI (Glutathione synthetase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH4_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 7.270e-49
Identity = 83/129 (64.34%), Postives = 99/129 (76.74%), Query Frame = 1
Query:   10 LVDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDGKTAPHLLQVK 396
            L++HAVAW+A NGLGMVV D  GLFT+THLP SLLP  LP   ++Q K LA LFN LVD + RD  WL+EVL  V+  D+FT+ L++I ETIEAEGGPRQ + L I+RSDYMLH P DG TAPHLLQV+
Sbjct:   16 LLEHAVAWSATNGLGMVVNDDKGLFTSTHLPFSLLPYALPADSYEQTKVLAPLFNTLVDRISRDGPWLKEVLKDVLAGDDFTSELVRIHETIEAEGGPRQPVCLAINRSDYMLHVPEDGVTAPHLLQVE 144          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A835Z3P5_9STRA (Glutathione synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3P5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 2.430e-39
Identity = 70/120 (58.33%), Postives = 90/120 (75.00%), Query Frame = 1
Query:   10 LVDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDGK 369
            L ++A+ W++VNGLGM VKDP GL+TTTHLP  L+PN LP +EF++A+ LA L+N+LVD + RDA WL  VL  VVE D FT  LL+I   + A+  P+Q L LGIHRSDYMLHAP +G+
Sbjct:   16 LTEYALGWSSVNGLGMGVKDPAGLWTTTHLPFCLMPNALPRREFEKARRLAPLYNELVDAISRDAEWLEGVLRDVVEGDPFTHELLKIFREVRAQAVPQQPLCLGIHRSDYMLHAPDNGE 135          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A7S2RJR4_9STRA (Glutathione synthetase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJR4_9STRA)

HSP 1 Score: 115 bits (287), Expect = 2.080e-27
Identity = 59/118 (50.00%), Postives = 77/118 (65.25%), Query Frame = 1
Query:    4 QQLVDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAP 357
            ++L   AV+WA++NGL MV    +   T  H P SLLPN  P +EF++AK L+ L+N LVD V  D+ WL   LAPV+E D FTARL+++ ++      P Q  RLGIHRSDYMLH P
Sbjct:   25 EELATEAVSWASMNGLQMVHPHHDEAATFIHAPFSLLPNVYPRQEFERAKRLSPLYNLLVDRVACDSEWLDRTLAPVLEDDPFTARLVELWKST-----PHQTRRLGIHRSDYMLHGP 137          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A7S0QHU8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0QHU8_9CRYP)

HSP 1 Score: 95.1 bits (235), Expect = 9.600e-22
Identity = 57/124 (45.97%), Postives = 73/124 (58.87%), Query Frame = 1
Query:   22 AVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDGKTAPHLLQV 393
            A AWA +NGL  VV  P G+      P+SLLP   P + +KQ   +   FN LV  V  D  +L E L PV E DEF ARLL+IL++++ EG  RQ L LG+HRSDYMLHA       P  +++
Sbjct:   66 ATAWAGLNGL--VVMRPTGIQVA---PISLLPMPFPRRVYKQVNEVMLDFNYLVHRVSLDYEFLMEHLLPVAESDEFQARLLKILKSVKEEG-VRQPLCLGVHRSDYMLHAAPGAPLVPKQVEI 183          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: R1BDF6_EMIHU (Glutathione synthase (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BDF6_EMIHU)

HSP 1 Score: 93.2 bits (230), Expect = 5.340e-20
Identity = 57/128 (44.53%), Postives = 75/128 (58.59%), Query Frame = 1
Query:    7 QLVDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDGKTAPHLLQ 390
            ++    +AW AV G+  ++     L      P SLLP   P + F+Q++ LA  FN LVD V RD  WL      VV+ D FT RLLQ+ E++ AEG P Q L+LGI+RSDYM+H P  G  AP LL+
Sbjct:   31 RMQSDTLAWQAVGGI--LIGAGASLLPA---PCSLLPYPWPSELFEQSRALAVPFNALVDRVARDVDWLHAATRSVVKQDAFTGRLLQLSESVHAEG-PTQPLQLGIYRSDYMVHQPPGG--APPLLR 150          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A8J6C5A5_DIALT (Glutathione synthase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C5A5_DIALT)

HSP 1 Score: 91.7 bits (226), Expect = 5.890e-19
Identity = 61/141 (43.26%), Postives = 73/141 (51.77%), Query Frame = 1
Query:   13 VDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAP------------RDGKTAPH-LLQVK 396
            V  AVA+AA NGL ++   P G     H P +L P   P  EF++A  LA LF +LV  V  DA WL + L      D FT RLL I   + AEG   Q +RLG+ RSDYMLH P              G T PH LLQV+
Sbjct:   49 VGAAVAYAACNGL-LMRGAPAGSANWVHCPFALQPMPFPRAEFERAVRLAPLFGRLVHRVASDAQWLHDALDATALGDPFTQRLLAISRAVHAEGDT-QPIRLGLFRSDYMLHGPGLQARALGVGGGNGGTTRPHSLLQVE 187          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A250WRX8_9CHLO (Glutathione synthetase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WRX8_9CHLO)

HSP 1 Score: 91.3 bits (225), Expect = 6.370e-19
Identity = 54/129 (41.86%), Postives = 73/129 (56.59%), Query Frame = 1
Query:    4 QQLVDHAVAWAAVNGLGMVVKDP---NGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALR-----LGIHRSDYMLHAPRDG 366
            + +V  A+ WA  +GL + +KD    N    T H+P++ LP   PE+ F QAK +  LFN+++D V  D A+L   LA   + D+FT RLLQ+L    A    RQAL      LGI+RSDYML  P  G
Sbjct:    8 ESIVQDAIVWANQHGLVVALKDKAFVNPECATVHVPLAALPVAFPEERFLQAKAVMPLFNRVIDRVAADEAYLERTLAAAAKFDDFTRRLLQLLV---ATRSARQALAGGEIALGINRSDYMLDEPSGG 133          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A7S2FM90_9STRA (Glutathione synthetase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM90_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 7.330e-19
Identity = 47/116 (40.52%), Postives = 66/116 (56.90%), Query Frame = 1
Query:   19 HAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDG 366
             A +WA +NGL MV +         H P SLLPN +  +EF++ K LA +FN L+D +  D  WL + + P +  D FTARL  I+ +      P Q +RLG+HRSDYM+    +G
Sbjct:   40 EATSWAHMNGLQMVSQTDEAFI---HAPFSLLPNKISRQEFEKVKRLAPVFNTLIDRIACDRTWLLDAIEPALATDAFTARLSSIMAST-----PHQRVRLGLHRSDYMMDDSAEG 147          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: A0A251TKG9_HELAN (Putative glutathione synthase, eukaryotic, Pre-ATP-grasp domain protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TKG9_HELAN)

HSP 1 Score: 86.3 bits (212), Expect = 4.940e-18
Identity = 52/123 (42.28%), Postives = 78/123 (63.41%), Query Frame = 1
Query:    1 MQQLVDHAVAWAAVNGLGMVVKDPN----GLFT---TTHLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYML 348
            +++LV  A+ W++++GL  VV D N    GL       H P++LLPN  PE  +KQA  LA +FN+LVD+V  D  +L++ L+   + D FT+RLL I   +  + G ++ +RLG+HRSDYML
Sbjct:   19 LKKLVHDALVWSSLHGL--VVGDRNSHRSGLVPGVGMVHAPIALLPNSFPESHWKQACELAPIFNELVDSVSLDGKFLQDTLSRTKKVDAFTSRLLDIHSKM-LQIGKKEDIRLGLHRSDYML 138          
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Match: Q93XE5_LOTJA (Glutathione synthetase n=1 Tax=Lotus japonicus TaxID=34305 RepID=Q93XE5_LOTJA)

HSP 1 Score: 88.6 bits (218), Expect = 6.730e-18
Identity = 56/137 (40.88%), Postives = 80/137 (58.39%), Query Frame = 1
Query:    1 MQQLVDHAVAWAAVNGLGMVVKDPNGLFTT-----THLPMSLLPNYLPEKEFKQAKTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGGPRQALRLGIHRSDYMLHAPRDGKTAPHLLQVK 396
            +Q++ D A+ WA+++GL M  K      T       H P +L P   PE +++QA  LA +FN+LVD V  D  +L+E L+   E DEFT+RLL I   + A    ++ +RLG+HRSDYML    D KT   LLQ++
Sbjct:   90 LQKIADDALVWASLHGLVMGDKSVQRSGTVPGVGLVHAPFALFPTLFPESQWRQACDLAPIFNELVDRVSLDGKFLQESLSRTKEVDEFTSRLLDIHSKMLAIN-KKEEIRLGLHRSDYML----DEKTKS-LLQIE 220          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14655.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRH4_ECTSI7.270e-4964.34Glutathione synthetase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A835Z3P5_9STRA2.430e-3958.33Glutathione synthetase n=1 Tax=Tribonema minus Tax... [more]
A0A7S2RJR4_9STRA2.080e-2750.00Glutathione synthetase n=1 Tax=Rhizochromulina mar... [more]
A0A7S0QHU8_9CRYP9.600e-2245.97Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
R1BDF6_EMIHU5.340e-2044.53Glutathione synthase (Fragment) n=1 Tax=Emiliania ... [more]
A0A8J6C5A5_DIALT5.890e-1943.26Glutathione synthase n=2 Tax=Diacronema lutheri Ta... [more]
A0A250WRX8_9CHLO6.370e-1941.86Glutathione synthetase n=1 Tax=Chlamydomonas eusti... [more]
A0A7S2FM90_9STRA7.330e-1940.52Glutathione synthetase n=2 Tax=Dictyocha speculum ... [more]
A0A251TKG9_HELAN4.940e-1842.28Putative glutathione synthase, eukaryotic, Pre-ATP... [more]
Q93XE5_LOTJA6.730e-1840.88Glutathione synthetase n=1 Tax=Lotus japonicus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14655contigP-wetherbeei_contig14655:1033..1546 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LRH4
Preferred nameGSS
PFAMsGSH_synth_ATP
Model size396
Max annot lvl2759|Eukaryota
KEGG rclassRC00064,RC00090,RC00096,RC00141,RC00162
KEGG koko:K01930,ko:K03539,ko:K18195,ko:K21456
KEGG ReactionR00497,R00942,R02237,R04241,R10994
KEGG Pathwayko00270,ko00480,ko00790,ko01100,ko01523,ko03008,ko03013,ko04216,map00270,map00480,map00790,map01100,map01523,map03008,map03013,map04216
KEGG ModuleM00118
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001101,GO:0003674,GO:0003824,GO:0004363,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006518,GO:0006520,GO:0006575,GO:0006749,GO:0006750,GO:0006790,GO:0006807,GO:0006810,GO:0006811,GO:0006820,GO:0006857,GO:0006950,GO:0006974,GO:0006979,GO:0007275,GO:0007399,GO:0007568,GO:0008144,GO:0008150,GO:0008152,GO:0009058,GO:0009410,GO:0009605,GO:0009636,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0015711,GO:0015833,GO:0016594,GO:0016597,GO:0016874,GO:0016879,GO:0016881,GO:0017076,GO:0019184,GO:0019748,GO:0019752,GO:0030554,GO:0031406,GO:0031667,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032991,GO:0033218,GO:0033554,GO:0034097,GO:0034612,GO:0034635,GO:0034641,GO:0035639,GO:0036087,GO:0036094,GO:0042165,GO:0042221,GO:0042277,GO:0042398,GO:0042493,GO:0042802,GO:0042803,GO:0042886,GO:0042939,GO:0043043,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043200,GO:0043295,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0044550,GO:0045471,GO:0046677,GO:0046685,GO:0046686,GO:0046872,GO:0046937,GO:0046938,GO:0046983,GO:0048037,GO:0048731,GO:0048856,GO:0050896,GO:0051179,GO:0051181,GO:0051186,GO:0051188,GO:0051234,GO:0051716,GO:0061687,GO:0070887,GO:0071241,GO:0071248,GO:0071276,GO:0071585,GO:0071702,GO:0071704,GO:0071705,GO:0071722,GO:0072337,GO:0072341,GO:0072348,GO:0090423,GO:0097159,GO:0097237,GO:0097305,GO:0097367,GO:0097501,GO:0098754,GO:0098849,GO:1900750,GO:1901265,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901681,GO:1901698,GO:1901700,GO:1902494,GO:1990170,GO:1990748
Exons2
Evalue1.19e-49
EggNOG OGsKOG0021@1|root,KOG0021@2759|Eukaryota
Ec32 ortholog descriptionGlutathione synthase
Ec32 orthologEc-18_004530.1
EC3.1.26.5,4.2.2.23,6.3.2.17,6.3.2.3
Descriptionglutathione synthase activity
Cds size396
COG categoryH
CAZyPL4
BiGG ReactioniMM904.YOL049W,iND750.YOL049W
BRITEko00000,ko00001,ko00002,ko01000,ko03009,ko03016,ko03029,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186029.0616293-CDS-P-wetherbeei_contig14655:1032..11531683186029.0616293-CDS-P-wetherbeei_contig14655:1032..1153Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14655 1033..1153 +
1683186029.0732567-CDS-P-wetherbeei_contig14655:1271..15461683186029.0732567-CDS-P-wetherbeei_contig14655:1271..1546Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14655 1272..1546 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14655.1.1prot_P-wetherbeei_contig14655.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14655 1033..1546 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14655.1.1

>prot_P-wetherbeei_contig14655.1.1 ID=prot_P-wetherbeei_contig14655.1.1|Name=mRNA_P-wetherbeei_contig14655.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=132bp
MQQLVDHAVAWAAVNGLGMVVKDPNGLFTTTHLPMSLLPNYLPEKEFKQA
KTLARLFNKLVDNVGRDAAWLREVLAPVVEHDEFTARLLQILETIEAEGG
PRQALRLGIHRSDYMLHAPRDGKTAPHLLQVK
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mRNA from alignment at P-wetherbeei_contig14655:1033..1546+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14655.1.1 ID=mRNA_P-wetherbeei_contig14655.1.1|Name=mRNA_P-wetherbeei_contig14655.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=514bp|location=Sequence derived from alignment at P-wetherbeei_contig14655:1033..1546+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCAGCTCGTAGACCATGCAGTGGCCTGGGCAGCGGTAAACGGGCT AGGCATGGTGGTGAAAGATCCAAACGGCCTCTTCACCACAACTCATTTAC CAATGAGCCTCTTACCAAACTGTGAGTTTTTGTTCGCCGTTGAGCGTGCC AATGATCTTGCAATCCCGTCATCTCTCTCCTCTGCGCAACGGTAGAAGCA AGACAGCCGCTACCCACGGCTCTCTCTCCACCTTCACAGATTTGCCTGAG AAGGAGTTCAAGCAGGCCAAGACGCTTGCGCGCCTTTTCAACAAGCTCGT CGACAACGTCGGTCGCGACGCCGCGTGGCTGCGCGAGGTGCTGGCGCCCG TGGTCGAGCACGACGAGTTCACGGCCCGCCTGCTGCAGATCCTAGAGACG ATCGAGGCCGAGGGCGGGCCGCGGCAGGCGCTGCGCCTCGGAATCCACCG GTCGGATTACATGCTTCACGCCCCAAGGGACGGAAAGACGGCGCCGCACC TCCTGCAGGTGAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14655:1033..1546+

>mRNA_P-wetherbeei_contig14655.1.1 ID=mRNA_P-wetherbeei_contig14655.1.1|Name=mRNA_P-wetherbeei_contig14655.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=396bp|location=Sequence derived from alignment at P-wetherbeei_contig14655:1033..1546+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGCAGCTCGTAGACCATGCAGTGGCCTGGGCAGCGGTAAACGGGCT
AGGCATGGTGGTGAAAGATCCAAACGGCCTCTTCACCACAACTCATTTAC
CAATGAGCCTCTTACCAAACTATTTGCCTGAGAAGGAGTTCAAGCAGGCC
AAGACGCTTGCGCGCCTTTTCAACAAGCTCGTCGACAACGTCGGTCGCGA
CGCCGCGTGGCTGCGCGAGGTGCTGGCGCCCGTGGTCGAGCACGACGAGT
TCACGGCCCGCCTGCTGCAGATCCTAGAGACGATCGAGGCCGAGGGCGGG
CCGCGGCAGGCGCTGCGCCTCGGAATCCACCGGTCGGATTACATGCTTCA
CGCCCCAAGGGACGGAAAGACGGCGCCGCACCTCCTGCAGGTGAAG
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