mRNA_P-wetherbeei_contig1465.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1465.1.1
Unique NamemRNA_P-wetherbeei_contig1465.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A835Z3J6_9STRA (Putative 26S proteasome non-ATPase regulatory subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3J6_9STRA)

HSP 1 Score: 335 bits (858), Expect = 4.350e-107
Identity = 165/195 (84.62%), Postives = 183/195 (93.85%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIA-DEMGG 582
            MPLESTMICLDNSEWMRNGDY+PTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAG GPELLVSPTDDMGKILSSLHDV + G+T ++AAVQIAQLALKHRRNKHGGQR+++FVASP+ +D K LIKVGKLLKKNNVAVDVVSMGEI++NQEKLQE +DAANSGDN HL+ +PAGILPSDVL++SPI+A D MGG
Sbjct:    1 MPLESTMICLDNSEWMRNGDYIPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGTGPELLVSPTDDMGKILSSLHDVKIGGRTCVSAAVQIAQLALKHRRNKHGGQRLVLFVASPVTDDVKALIKVGKLLKKNNVAVDVVSMGEIDDNQEKLQELIDAANSGDNSHLITVPAGILPSDVLITSPIVAGDGMGG 195
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: D8LDZ0_ECTSI (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDZ0_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 6.030e-102
Identity = 155/184 (84.24%), Postives = 174/184 (94.57%), Query Frame = 1 
Query:   19 MICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIAD 570
            MICLDNSEWMRNGDY+PTRMEAQHDAANL+CG+KT SNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLH V +HGKTN AA +QIAQLALKHRRNKHGGQRIIIFV+SPIE++ KTL+KVGK+LKKNNVA DVVSMGE ++NQEKL+EF+ AANSGDNCHLV IPAG+LPSDVL+SSPI+++
Sbjct:    1 MICLDNSEWMRNGDYIPTRMEAQHDAANLLCGSKTNSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHGVSVHGKTNFAAGIQIAQLALKHRRNKHGGQRIIIFVSSPIEDETKTLVKVGKMLKKNNVAADVVSMGETDDNQEKLEEFIGAANSGDNCHLVTIPAGVLPSDVLISSPIVSE 184
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A7S2V4F9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4F9_9STRA)

HSP 1 Score: 312 bits (800), Expect = 6.970e-97
Identity = 147/195 (75.38%), Postives = 178/195 (91.28%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIADEMGGM 585
            MPLEST++CLDNSEWMRNGDY+PTRME+QHDAANL+CG K QSNPESTVGVL+MAG+  ELLVSPTDDMGKIL+SLH+VP+ G+ NLAAAVQIAQLALKHRRNKHGGQR++IFV SP+ ++ K LIKVGKLLKKNNVAVDV+S+GE++ENQEKLQ+FV+AANS +N HL+ +PAG+LPSDVL++SP++ +   GM
Sbjct:   31 MPLESTIVCLDNSEWMRNGDYIPTRMESQHDAANLLCGAKIQSNPESTVGVLSMAGRRVELLVSPTDDMGKILASLHEVPIQGRLNLAAAVQIAQLALKHRRNKHGGQRVVIFVGSPVLDEKKALIKVGKLLKKNNVAVDVISLGELDENQEKLQDFVEAANSSENSHLITVPAGVLPSDVLINSPVLQEGGAGM 225
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A0W8DJJ6_PHYNI (VWFA domain-containing protein n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DJJ6_PHYNI)

HSP 1 Score: 286 bits (732), Expect = 7.610e-90
Identity = 135/193 (69.95%), Postives = 166/193 (86.01%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIADEMG 579
            MPLESTMICLDNSEWMRNGDY+P+R+EAQHDAANL+CGTKTQ+NPESTVGVL MAGK  ++L SPTD+MG +LS++H + + G   LA A+Q+AQLALKHRRNK GGQR+++F+ SPIEED K L K+GKLLKKNN+AVDVVSMG+++ N  KLQ FVDAA+S +N HLV +PAG+LPSDVLVSSP++  + G
Sbjct:    1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHRIKIGGSMKLANAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDLDANAAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDG 193
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: W7TJL4_9STRA (26s proteasome non-atpase regulatory n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJL4_9STRA)

HSP 1 Score: 292 bits (748), Expect = 9.740e-90
Identity = 142/188 (75.53%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPII 564
            MPLE+T+IC+DNSEW RNGDY+PTR EAQHDA NLV G KTQ NPESTVGVLTMAG+G ELLVSPTDD+GK+LS LH V + G+ ++A AVQ+AQLALKHRRNK+G QR+++FV SP+E DAKTL+KVGK LKKN +AVDVVS+GEIEENQEKLQEFV+A NS  N HLV IPAG LPSDVLV+SPII
Sbjct:    1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHSVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPVEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPII 188
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A4D9DBB3_9STRA (VWFA domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DBB3_9STRA)

HSP 1 Score: 292 bits (747), Expect = 3.560e-89
Identity = 146/201 (72.64%), Postives = 168/201 (83.58%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPII-----ADEMGGMG 588
            MPLE+T+IC+DNSEW RNGDY+PTR EAQHDA NLV G KTQ NPESTVGVLTMAG+G ELLVSPTDD+GK+LS LH V + G+ ++A AVQ+AQLALKHRRNK+G QR+++FV SP+E DAKTL+KVGK LKKN +AVDVVS+GEIEENQEKLQEFV+A NS  N HLV IPAG LPSDVLV+SPII       E  GMG
Sbjct:    1 MPLETTIICVDNSEWTRNGDYIPTRFEAQHDAVNLVTGAKTQQNPESTVGVLTMAGRGVELLVSPTDDIGKLLSCLHGVRMGGRVDMAGAVQVAQLALKHRRNKNGSQRVVVFVCSPLEADAKTLVKVGKQLKKNGIAVDVVSLGEIEENQEKLQEFVEATNSNSNSHLVSIPAGFLPSDVLVTSPIIHGGEEGSEGAGMG 201
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A3R7GT30_9STRA (VWFA domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GT30_9STRA)

HSP 1 Score: 287 bits (735), Expect = 1.850e-88
Identity = 137/193 (70.98%), Postives = 166/193 (86.01%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIADEMG 579
            MPLESTMICLDNSEWMRNGDY+P+R+EAQHDAANL+CGTKTQSNPESTVGVL MAGK  ++L SPTD+MG +LS++H V + G   LA ++Q+AQLALKHRRNK GGQR+++F+ SPIEED K L K+GKLLKKNN+AVDVVSMGE++ N  KLQ FVDAA+S +N HLV +PAG+LPSDVLVSSP++  + G
Sbjct:    1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLAMAGKSTQVLASPTDNMGTLLSAIHRVKVGGTMKLANSIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGELDANAAKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVLHGDDG 193
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A0P1B661_PLAHL (Multiubiquitin chain binding protein mbp1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B661_PLAHL)

HSP 1 Score: 285 bits (730), Expect = 4.100e-88
Identity = 134/188 (71.28%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPII 564
            MPLESTMICLDNSEWMRNGDY+P+R+EAQHDAANL+CGTKTQ+NPESTVGVL MAGK  ++L SPTD+MG +LS++H V + G   L+ A+Q+AQLALKHRRNK GGQR+++F+ SPIEED K L K+GKLLKKNN+AVDVVSMG+++ N  KLQ FVDAA+S +N HLV +PAG+LPSDVLVSSP++
Sbjct:    1 MPLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQANPESTVGVLAMAGKSVQVLASPTDNMGTLLSAIHGVKIGGSMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPIEEDEKQLTKIGKLLKKNNIAVDVVSMGDMDTNASKLQAFVDAASSNNNSHLVTVPAGVLPSDVLVSSPVL 188
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: A0A2D4BJ33_PYTIN (26S proteasome non-ATPase regulatory subunit, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJ33_PYTIN)

HSP 1 Score: 285 bits (730), Expect = 8.220e-88
Identity = 136/196 (69.39%), Postives = 167/196 (85.20%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIADEMGGMG 588
            MPLESTMICLDNSEWMRNGDY+PTR+EAQHDAANL+CG KTQSNPESTVG+LTMAG+  ++L SPT++MG +LS++H + + G   L+ A+Q+AQLALKHRRNK G QR+++FV SPI ED K L+K+GKLLKKNN+AVDVVS+G+I+ N  KLQ FVDAA+S +N HLV +P G+LPSDVLVSSPII  + GGMG
Sbjct:    1 MPLESTMICLDNSEWMRNGDYIPTRLEAQHDAANLLCGAKTQSNPESTVGILTMAGRSVQVLASPTENMGTLLSAVHSITVGGTLKLSNALQVAQLALKHRRNKTGAQRVVVFVGSPIVEDEKALVKIGKLLKKNNIAVDVVSLGDIDANGPKLQAFVDAASSSNNSHLVTVPPGVLPSDVLVSSPIIHGDDGGMG 196
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BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Match: K3WTP6_GLOUD (VWFA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WTP6_GLOUD)

HSP 1 Score: 285 bits (728), Expect = 1.350e-87
Identity = 134/188 (71.28%), Postives = 164/188 (87.23%), Query Frame = 1 
Query:    1 MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVGVLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKHRRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEENQEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPII 564
            M LESTMICLDNSEWMRNGDY+P+R+EAQHDAANL+CGTKTQSNPESTVGVLTMAGK  ++L SPT+ MG +L+++H V + G+  L+ A+Q+AQLALKHRRNK GGQR+++F+ SPI ED KTL K+GKLLKKNN+AVDV+SMGE++ N  KLQ FVDAANS +N HLV +PAG+LPSDVLVSSP++
Sbjct:    1 MVLESTMICLDNSEWMRNGDYIPSRLEAQHDAANLLCGTKTQSNPESTVGVLTMAGKSVQVLASPTESMGTLLNAVHSVSIGGEMKLSNAIQVAQLALKHRRNKTGGQRVVVFIGSPITEDDKTLTKIGKLLKKNNIAVDVISMGEVDANAAKLQVFVDAANSNNNSHLVTVPAGVLPSDVLVSSPVL 188
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1465.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z3J6_9STRA4.350e-10784.62Putative 26S proteasome non-ATPase regulatory subu... [more]
D8LDZ0_ECTSI6.030e-10284.24VWFA domain-containing protein n=2 Tax=Ectocarpus ... [more]
A0A7S2V4F9_9STRA6.970e-9775.38Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A0W8DJJ6_PHYNI7.610e-9069.95VWFA domain-containing protein n=1 Tax=Phytophthor... [more]
W7TJL4_9STRA9.740e-9075.5326s proteasome non-atpase regulatory n=1 Tax=Nanno... [more]
A0A4D9DBB3_9STRA3.560e-8972.64VWFA domain-containing protein n=1 Tax=Nannochloro... [more]
A0A3R7GT30_9STRA1.850e-8870.98VWFA domain-containing protein n=4 Tax=Phytophthor... [more]
A0A0P1B661_PLAHL4.100e-8871.28Multiubiquitin chain binding protein mbp1 n=1 Tax=... [more]
A0A2D4BJ33_PYTIN8.220e-8869.3926S proteasome non-ATPase regulatory subunit, puta... [more]
K3WTP6_GLOUD1.350e-8771.28VWFA domain-containing protein n=1 Tax=Globisporan... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1465contigP-wetherbeei_contig1465:182..2576 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LDZ0
Preferred namePSMD4
PFAMsUIM,VWA_2
Model size1781
Max annot lvl2759|Eukaryota
KEGG rclassRC00002,RC00078
KEGG koko:K00889,ko:K03029
KEGG ReactionR03469
KEGG Pathwayko00562,ko01100,ko03050,ko04011,ko04070,ko04072,ko04139,ko04144,ko04666,ko04810,ko05169,ko05231,map00562,map01100,map03050,map04011,map04070,map04072,map04139,map04144,map04666,map04810,map05169,map05231
KEGG ModuleM00130,M00341
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000070,GO:0000278,GO:0000280,GO:0000502,GO:0000819,GO:0003674,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005838,GO:0006464,GO:0006508,GO:0006511,GO:0006807,GO:0006996,GO:0007049,GO:0007059,GO:0007088,GO:0007276,GO:0007283,GO:0007346,GO:0008134,GO:0008150,GO:0008152,GO:0008270,GO:0008540,GO:0008541,GO:0009056,GO:0009057,GO:0009896,GO:0009987,GO:0010498,GO:0010564,GO:0010638,GO:0010965,GO:0016043,GO:0016579,GO:0019538,GO:0019899,GO:0019941,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0022624,GO:0030071,GO:0030163,GO:0031331,GO:0031593,GO:0031624,GO:0031974,GO:0031981,GO:0032182,GO:0032270,GO:0032436,GO:0032501,GO:0032504,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033047,GO:0034622,GO:0036211,GO:0036435,GO:0042802,GO:0043130,GO:0043161,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043248,GO:0043412,GO:0043632,GO:0043687,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044390,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045732,GO:0045787,GO:0045840,GO:0045842,GO:0045862,GO:0045931,GO:0046872,GO:0046914,GO:0048232,GO:0048285,GO:0048518,GO:0048522,GO:0048609,GO:0050789,GO:0050794,GO:0051128,GO:0051130,GO:0051247,GO:0051276,GO:0051603,GO:0051704,GO:0051726,GO:0051781,GO:0051783,GO:0051785,GO:0051983,GO:0051984,GO:0062033,GO:0065003,GO:0065007,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0071840,GO:0090068,GO:0098813,GO:0140014,GO:0140030,GO:1901564,GO:1901565,GO:1901575,GO:1901800,GO:1901970,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1902099,GO:1902101,GO:1902494,GO:1903047,GO:1903052,GO:1903364,GO:1905368,GO:1905369,GO:1905818,GO:1905820,GO:2001252
Exons4
Evalue1.09e-104
EggNOG OGsCOG5148@1|root,KOG2884@2759|Eukaryota
Ec32 ortholog descriptionvon Willebrand factor, type A
Ec32 orthologEc-23_003240.1
EC2.7.1.68
Descriptionproteasome assembly
Cds size1341
COG categoryO
BRITEko00000,ko00001,ko00002,ko01000,ko03051,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.8087258-UTR-P-wetherbeei_contig1465:181..6211683186028.8087258-UTR-P-wetherbeei_contig1465:181..621Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1465 182..621 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186028.8189514-CDS-P-wetherbeei_contig1465:621..15091683186028.8189514-CDS-P-wetherbeei_contig1465:621..1509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1465 622..1509 -
1683186028.8266857-CDS-P-wetherbeei_contig1465:1839..20071683186028.8266857-CDS-P-wetherbeei_contig1465:1839..2007Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1465 1840..2007 -
1683186028.8341386-CDS-P-wetherbeei_contig1465:2166..24251683186028.8341386-CDS-P-wetherbeei_contig1465:2166..2425Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1465 2167..2425 -
1683186028.8417315-CDS-P-wetherbeei_contig1465:2550..25761683186028.8417315-CDS-P-wetherbeei_contig1465:2550..2576Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1465 2551..2576 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1465.1.1prot_P-wetherbeei_contig1465.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1465 622..2576 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1465.1.1

>prot_P-wetherbeei_contig1465.1.1 ID=prot_P-wetherbeei_contig1465.1.1|Name=mRNA_P-wetherbeei_contig1465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=447bp
MPLESTMICLDNSEWMRNGDYVPTRMEAQHDAANLVCGTKTQSNPESTVG
VLTMAGKGPELLVSPTDDMGKILSSLHDVPLHGKTNLAAAVQIAQLALKH
RRNKHGGQRIIIFVASPIEEDAKTLIKVGKLLKKNNVAVDVVSMGEIEEN
QEKLQEFVDAANSGDNCHLVVIPAGILPSDVLVSSPIIADEMGGMGGGMG
GGAGGGTGAGGDFGGGEFGGVDPNMDPELAMALRVSMEEERARQEAAAKV
AGDAAGAGAGETKAADAMETDDVTAAATAAVAAAAAGSGGSAAAARGTAD
MDADEELLLQQALTMSTQDMDADAGAGGMSGEEYEAMQEALRMSMAESDA
DAAPAAPASAPAVAPPQLTPAEGVSESKSSEGNAPAAASAASAVAPGGEF
LNPDFARSLIEGLPGVDTSDPRIKAALEKLNKPAADKPDEKNGDSK*
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mRNA from alignment at P-wetherbeei_contig1465:182..2576-

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1465.1.1 ID=mRNA_P-wetherbeei_contig1465.1.1|Name=mRNA_P-wetherbeei_contig1465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2395bp|location=Sequence derived from alignment at P-wetherbeei_contig1465:182..2576- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCTCGAATCGACGATGATATGGTGAGTCGCTCCAACGCAGTTGCA
AATGTCGCACGAGGAGGCATTGAAGTCGTCCAGCCCGTTTCTGTCGATTT
CCGCTCACCTCGTACACTCTCTTCTCTTTATTTGCATCTCTCGTCGCTCA
GCTTGGACAACTCAGAATGGATGCGCAACGGCGATTATGTGCCGACTCGC
ATGGAGGCGCAGCACGACGCCGCGAACCTGGTGTGCGGGACCAAGACGCA
GTCCAACCCTGAGAGCACGGTTGGCGTTTTGACGATGGCCGGAAAGGGAC
CAGAGCTGCTGGTCTCTCCGACCGACGACATGGGGAAAATCCTTTCATCG
TTGCACGACGTCCCGCTGCATGGGAAAACCAACCTCGCTGCTGCAGTCCA
GATTGCGCAGGTGAGACAGTAACCGCTCGCCCCCGCCTCTCGATTCTGGA
TATGTATCCTCTTACCCGCGTTCGCTGCGCGCGCTTTCTTGCCGACGTTT
GCTTTTTCATTGAATCACGAACACCTTTTTTCAAGGTGCTGGCTCCATTT
TATCAACCCTTTGCTGCAGCTGGCACTCAAGCACCGGCGCAACAAGCACG
GCGGGCAGCGCATCATCATATTCGTGGCGAGCCCGATCGAGGAAGACGCC
AAGACGCTCATCAAGGTCGGCAAGCTGCTCAAGAAGAACAACGTCGCCGT
CGACGTCGTCTCGATGGGCGAGATCGAGGAGAACCAGGTACGCCGTGGGA
AGGGACTGGACTTTTCAACTTTTGTCATTTGCCAAAACAGAGCACAACAG
TAGTGATGGTAGAAAGTCTGGCATTAGCTATGATTGAGACCTCTTCGTGG
AGAAGGACAATCCCTACGATTAATTGTGCAGTGTGAAAGCTGCTGCCAGG
ATACAGAACGCCAATATCAACCGTAGACCCTGGCACCATGATCGCTGGCA
GTGTGCTTGTTCATGGGTACACTTTAATCTCCATCTCAACCAACCCTGGC
ATGGCATTTGTCGTCCCTTACCATTCCCTTTGCTTTCTCCTGCTCTCTAT
TTCGCCTCCAATAACAGGAGAAGCTGCAGGAGTTCGTGGACGCGGCCAAC
AGCGGCGATAACTGCCACCTCGTCGTCATCCCTGCCGGCATCCTCCCCTC
GGACGTGCTCGTCTCGTCGCCCATCATCGCCGATGAGATGGGCGGCATGG
GCGGCGGCATGGGCGGCGGCGCCGGCGGCGGCACCGGCGCCGGCGGCGAC
TTCGGCGGTGGAGAGTTCGGCGGCGTTGACCCCAACATGGACCCCGAGCT
GGCCATGGCACTGCGCGTCAGCATGGAGGAGGAGCGGGCGCGGCAGGAGG
CGGCCGCCAAGGTGGCCGGCGACGCCGCCGGCGCCGGTGCGGGGGAGACG
AAGGCGGCAGACGCCATGGAGACGGATGACGTCACGGCAGCGGCGACGGC
GGCGGTGGCAGCGGCGGCGGCTGGGTCGGGGGGATCAGCGGCGGCGGCGA
GAGGCACTGCGGACATGGACGCTGACGAGGAGCTGCTGCTGCAGCAGGCT
CTGACGATGTCGACGCAGGATATGGACGCCGATGCCGGTGCCGGTGGCAT
GAGCGGAGAGGAGTACGAGGCCATGCAGGAAGCGCTCCGCATGTCCATGG
CTGAGTCAGACGCCGACGCCGCCCCGGCCGCTCCCGCATCCGCCCCGGCT
GTGGCCCCGCCGCAGTTAACGCCAGCGGAGGGGGTCTCCGAGAGCAAGTC
GTCGGAAGGGAACGCCCCGGCGGCAGCGTCGGCGGCGTCGGCAGTGGCGC
CCGGGGGCGAGTTTTTGAACCCAGACTTCGCGCGGTCGCTGATCGAGGGG
CTGCCGGGTGTGGACACGAGCGACCCGCGCATTAAGGCGGCGCTGGAGAA
GCTTAACAAGCCGGCCGCCGACAAGCCCGACGAGAAGAACGGCGACAGCA
AGTAAGCTTGTTGCTGCGCGGGAACAGCAAATAAGTCGCTGCGCTCTTCC
AGCTTCTCTCTTCCGGATCCAGTCCGTTCCAGCACCGGCGCCGAGGGCTA
TTCGGCGGCGGCAGTCTGGCGGCCTGATTCAGTTCGATTTGGTTCCGTTC
GGTCAAACCGACCGGCCCAGAGGCTACCCTGCAGCGCCGTAATCGAGGGA
GCCGGAGGCGGGCGCGGCTTTGAGGTGGGCGCAGCGACGAAGCGGCTCAC
CATCCGGGGTCAAGTGCGGCCGTTCGCCGCTGGCTGGTGCAACAGTTTTC
CAGAGGATGCGAGGCGGAAGCGTCGCGCATCGATTTGTGAATATAAGAGC
TTTGCTCTCACTCTCTCGTCATAAATCCGGCTTTCAGCCTTGCCGCTGCC
AAAAGCAAGGCTTGCACGCAAAGAGTCGTCATTAGCGCATGGGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1465:182..2576-

>mRNA_P-wetherbeei_contig1465.1.1 ID=mRNA_P-wetherbeei_contig1465.1.1|Name=mRNA_P-wetherbeei_contig1465.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1341bp|location=Sequence derived from alignment at P-wetherbeei_contig1465:182..2576- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGCTCGAATCGACGATGATATGCTTGGACAACTCAGAATGGATGCG
CAACGGCGATTATGTGCCGACTCGCATGGAGGCGCAGCACGACGCCGCGA
ACCTGGTGTGCGGGACCAAGACGCAGTCCAACCCTGAGAGCACGGTTGGC
GTTTTGACGATGGCCGGAAAGGGACCAGAGCTGCTGGTCTCTCCGACCGA
CGACATGGGGAAAATCCTTTCATCGTTGCACGACGTCCCGCTGCATGGGA
AAACCAACCTCGCTGCTGCAGTCCAGATTGCGCAGCTGGCACTCAAGCAC
CGGCGCAACAAGCACGGCGGGCAGCGCATCATCATATTCGTGGCGAGCCC
GATCGAGGAAGACGCCAAGACGCTCATCAAGGTCGGCAAGCTGCTCAAGA
AGAACAACGTCGCCGTCGACGTCGTCTCGATGGGCGAGATCGAGGAGAAC
CAGGAGAAGCTGCAGGAGTTCGTGGACGCGGCCAACAGCGGCGATAACTG
CCACCTCGTCGTCATCCCTGCCGGCATCCTCCCCTCGGACGTGCTCGTCT
CGTCGCCCATCATCGCCGATGAGATGGGCGGCATGGGCGGCGGCATGGGC
GGCGGCGCCGGCGGCGGCACCGGCGCCGGCGGCGACTTCGGCGGTGGAGA
GTTCGGCGGCGTTGACCCCAACATGGACCCCGAGCTGGCCATGGCACTGC
GCGTCAGCATGGAGGAGGAGCGGGCGCGGCAGGAGGCGGCCGCCAAGGTG
GCCGGCGACGCCGCCGGCGCCGGTGCGGGGGAGACGAAGGCGGCAGACGC
CATGGAGACGGATGACGTCACGGCAGCGGCGACGGCGGCGGTGGCAGCGG
CGGCGGCTGGGTCGGGGGGATCAGCGGCGGCGGCGAGAGGCACTGCGGAC
ATGGACGCTGACGAGGAGCTGCTGCTGCAGCAGGCTCTGACGATGTCGAC
GCAGGATATGGACGCCGATGCCGGTGCCGGTGGCATGAGCGGAGAGGAGT
ACGAGGCCATGCAGGAAGCGCTCCGCATGTCCATGGCTGAGTCAGACGCC
GACGCCGCCCCGGCCGCTCCCGCATCCGCCCCGGCTGTGGCCCCGCCGCA
GTTAACGCCAGCGGAGGGGGTCTCCGAGAGCAAGTCGTCGGAAGGGAACG
CCCCGGCGGCAGCGTCGGCGGCGTCGGCAGTGGCGCCCGGGGGCGAGTTT
TTGAACCCAGACTTCGCGCGGTCGCTGATCGAGGGGCTGCCGGGTGTGGA
CACGAGCGACCCGCGCATTAAGGCGGCGCTGGAGAAGCTTAACAAGCCGG
CCGCCGACAAGCCCGACGAGAAGAACGGCGACAGCAAGTAA
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