mRNA_P-wetherbeei_contig14617.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A7S2RTW0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RTW0_9STRA) HSP 1 Score: 160 bits (406), Expect = 2.120e-47 Identity = 81/149 (54.36%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P L+++AAEE T++EHLPVFE+NGF+ +D+ A P ++LKL VPFSK TQFG +D+ ELASI+ LP +S LQ P + R MFASRACR SVMIGTALD M ++V ++ ++QPWNCPHGRPTMRHLT+L
Sbjct: 45 PKTLEVTAAEEATIVEHLPVFERNGFQIAVDEAAPPTQRLKLEKVPFSKTTQFGVDDIHELASIIADLPSDSAAGYSD------LQLP------KIRMMFASRACRSSVMIGTALDVPAMAKIVRKLESIEQPWNCPHGRPTMRHLTEL 181
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: D7FV66_ECTSI (Postmeiotic segregation increased 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV66_ECTSI) HSP 1 Score: 169 bits (427), Expect = 8.530e-46 Identity = 84/149 (56.38%), Postives = 107/149 (71.81%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P+ L+ SA+EEMT+++++ +FE+NGFRF IDDD KKLK+ A+PFSKGTQFG +DV ELASI+ T+P + R + ARAMFASRACR S MIG ALD G+M R+VA+MA ++QPWNCPHGRPTMRHL D+
Sbjct: 759 PLPLETSASEEMTIIDNIALFERNGFRFTIDDDQPTTKKLKITAIPFSKGTQFGVDDVHELASIVAD-------NTNPGEMVRLPK---------ARAMFASRACRSSFMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADV 891
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A6A5AM97_9STRA (MutL_C domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AM97_9STRA) HSP 1 Score: 155 bits (393), Expect = 2.300e-45 Identity = 78/149 (52.35%), Postives = 105/149 (70.47%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
PMAL+++A EEMT+L+HLP+F+K GF F +D A +KL+L +VPFSK TQ+G +DVREL S++ +E+ T++ P T AMFASRACR +VMIGTAL M+++V Q+A+++QPWNCPHGRPTMRHL DL
Sbjct: 56 PMALELTAVEEMTILDHLPLFKKQGFHFQVDPAAPVTQKLRLISVPFSKHTQWGVDDVRELVSLV--------LESPHAAAAATIRLPKTL------AMFASRACRSAVMIGTALKREDMQKIVVQLAELEQPWNCPHGRPTMRHLVDL 190
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: I2CR37_NANGC (MutL_C domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CR37_NANGC) HSP 1 Score: 152 bits (385), Expect = 8.180e-44 Identity = 74/149 (49.66%), Postives = 104/149 (69.80%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P L++SA EE+ +LEHLP F+ NGF F +D +A P +++KL ++P+SKG QFG +D+ ELAS+L VE + +++ P + RAMFASRACR S+MIG AL +M+++VA +A+++QPWNCPHGRPTMRHL DL
Sbjct: 78 PKPLELSAMEEVVILEHLPTFKANGFSFRLDPEAGPMERIKLLSLPYSKGIQFGLQDIHELASLLGDSSFCGGVEEGAEGPAPSVRLP------KIRAMFASRACRMSIMIGKALTRSQMQKVVANLAEIEQPWNCPHGRPTMRHLVDL 220
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A7S3ESW8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ESW8_9EUKA) HSP 1 Score: 150 bits (379), Expect = 9.390e-44 Identity = 73/149 (48.99%), Postives = 99/149 (66.44%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P+ L M+AA+E+ V++HL +F++NGF +D A P ++L+L A+PFSK T FGA D+ EL +L P + P + RAMFA RACR SVMIGTAL+H +MR+LV+Q+A ++QPWNCPHGRPT+RHL DL
Sbjct: 7 PLRLQMTAADELVVIDHLNIFKQNGFEIQVDTAAAPTQRLRLVALPFSKHTVFGASDITELVHLLSEAPGQQ------------CRLP------KLRAMFAMRACRSSVMIGTALEHAKMRQLVSQLAGLEQPWNCPHGRPTLRHLVDL 137
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A1W0A3J1_9STRA (Mismatch repair endonuclease PMS2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3J1_9STRA) HSP 1 Score: 162 bits (409), Expect = 1.930e-43 Identity = 83/149 (55.70%), Postives = 103/149 (69.13%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
PMA++++A EEMT+LEHLP+FEK GF F ID A KKLKL ++PFSK T FG DVRELAS+L P + +TL+ P + AMFASRACR +VMIGTAL M+++V Q++ +DQPWNCPHGRPTMRHL DL
Sbjct: 677 PMAMELTAVEEMTILEHLPIFEKQGFHFAIDATAPVTKKLKLISLPFSKHTTFGLSDVRELASLLMEAPHQA----------QTLRLP------KVTAMFASRACRSAVMIGTALRKEEMQKIVTQLSTLDQPWNCPHGRPTMRHLVDL 809
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A6G0XYA5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XYA5_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.150e-42 Identity = 79/149 (53.02%), Postives = 101/149 (67.79%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
PM+L ++A EEMT+L+HL VF+K GF F +D+ A +KLKL +VPFSK TQ+G +DVREL S+L P TP T + AMFASRACR +VMIGTAL M+++V Q+A+++QPWNCPHGRPTMRHL DL
Sbjct: 643 PMSLQLTAIEEMTILDHLDVFKKQGFHFQVDESANVTEKLKLISVPFSKQTQWGVDDVRELVSLLLESP----------------NTPATIRLPKTLAMFASRACRSAVMIGTALKRDEMQKIVLQLAELEQPWNCPHGRPTMRHLVDL 775
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A024UUQ3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUQ3_9STRA) HSP 1 Score: 158 bits (400), Expect = 3.470e-42 Identity = 78/149 (52.35%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
PM LD++A EEMT+L+HLP+F+K GF F +D A +KLKL +VPFSK TQ+G +DVREL S++ P T++ P T AMFASRACR +VMIGTAL M++++ Q+A+++QPWNCPHGRPTMRHL DL
Sbjct: 685 PMPLDLTAVEEMTILDHLPLFKKQGFHFQVDPSAAATQKLKLISVPFSKHTQWGVDDVRELVSLVLESP----------HAASTIRLPKTL------AMFASRACRSAVMIGTALKRDEMQKILLQLAELEQPWNCPHGRPTMRHLVDL 817
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A3M6VHF3_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VHF3_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.280e-42 Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P+ L+++A EEM +L+HL VF KNGF F +D DA KKLKL ++PF+K TQFG ED+RELAS+L P NS T++ P + AMFASRACR S+MIGTAL M+++V ++ +DQPWNCPHGRPT+RHL DL
Sbjct: 652 PLMLELTAGEEMIILDHLDVFAKNGFTFFVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPLNS----------STIRLP------KVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDL 784
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Match: A0A833X1G2_PHYIN (MutL C terminal dimerization domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833X1G2_PHYIN) HSP 1 Score: 158 bits (399), Expect = 4.350e-42 Identity = 79/149 (53.02%), Postives = 102/149 (68.46%), Query Frame = 1
Query: 1 PMALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTQFGAEDVRELASILCSLPPNSPVETDPQQTTRTLQTPGTANPGQARAMFASRACRKSVMIGTALDHGRMRRLVAQMADVDQPWNCPHGRPTMRHLTDL 447
P+ L+++A EEM +L+HL VF KNGF F +D DA KKLKL ++PF+K TQFG ED+RELAS+L P N T T++ P + AMFASRACR S+MIGTAL M+++V ++ +DQPWNCPHGRPT+RHL DL
Sbjct: 656 PLRLELTAGEEMVILDHLGVFTKNGFTFLVDKDAPATKKLKLLSLPFTKHTQFGTEDIRELASLLMDAPMN----------TSTIRLP------KVMAMFASRACRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDL 788 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14617.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14617.1.1 >prot_P-wetherbeei_contig14617.1.1 ID=prot_P-wetherbeei_contig14617.1.1|Name=mRNA_P-wetherbeei_contig14617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=148bp MALDMSAAEEMTVLEHLPVFEKNGFRFDIDDDALPGKKLKLAAVPFSKGTback to top mRNA from alignment at P-wetherbeei_contig14617:213..1347+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14617.1.1 ID=mRNA_P-wetherbeei_contig14617.1.1|Name=mRNA_P-wetherbeei_contig14617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1135bp|location=Sequence derived from alignment at P-wetherbeei_contig14617:213..1347+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14617:213..1347+ >mRNA_P-wetherbeei_contig14617.1.1 ID=mRNA_P-wetherbeei_contig14617.1.1|Name=mRNA_P-wetherbeei_contig14617.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=444bp|location=Sequence derived from alignment at P-wetherbeei_contig14617:213..1347+ (Phaeothamnion wetherbeei SAG_119_79)back to top |