mRNA_P-wetherbeei_contig14610.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14610.2.1
Unique NamemRNA_P-wetherbeei_contig14610.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A7S4DGQ1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DGQ1_HETAK)

HSP 1 Score: 202 bits (513), Expect = 8.900e-58
Identity = 177/307 (57.65%), Postives = 204/307 (66.45%), Query Frame = 1
Query:   40 NPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPV----VPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGGLG---GDTPMYAPP 939
            NP  V +L +MGFPEDQ +AALRAA GNGD+AVEFLMNGIPEG+P   A  G    A  GGA    AA+ G    LDALRRHPQ +AL+RLVQS+P ALQQVLQQIG QSPELLA IH+NQ EF+ MMNEPV      A XXXXXXXXXXXXXXXXXXXXXXXXXXXX          L ++P  QRA +A  +G+  +QL+              QQ+MA      G GXXXXXXX    G     IRLT +E  AV R+ ++GF+R    QAYLACDKNEAMAANLLMDG +G    D  ++APP
Sbjct:  136 NPETVQQLVDMGFPEDQVKAALRAAMGNGDVAVEFLMNGIPEGLPTNPAAAG----ASSGGA----AASTGTGHPLDALRRHPQLNALKRLVQSNPGALQQVLQQIGAQSPELLATIHANQEEFVRMMNEPVDESAPAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPAIMARMMQLASLPEAQRAQVAQSLGIPADQLNQFVNLMRMMPPEQLQQIMAA-----GMGXXXXXXXGLPPGAT--TIRLTQDEADAVNRLCDMGFNRNNVMQAYLACDKNEAMAANLLMDG-MGFDDDDADVFAPP 426          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A6G0WDE9_9STRA (UV excision repair protein RAD23 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WDE9_9STRA)

HSP 1 Score: 201 bits (510), Expect = 9.190e-58
Identity = 147/289 (50.87%), Postives = 174/289 (60.21%), Query Frame = 1
Query:   52 VARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGGLGGD 918
            + +L +MGFPE+Q + AL+AA  N D AVE+LMNGIPE  PA          AP   AP   +   GAP SL+ALR HPQFDALRRL+QS+PAAL  VLQQIG QSPELL LIH+NQ EF+ M+NEP+  +                                       + ++ PQQ+AAMAAQMG+TP+QL XXXXXXXXXXXXX  QMM  M A  GGG            G P  I LT EE AAV R+ ++GFDR E  QAYLACDKNEA+AAN LMD  + GD
Sbjct:  140 IRQLCDMGFPEEQVRVALQAAFNNPDRAVEYLMNGIPE-QPA----------APPASAPAAASGGLGAPNSLEALRSHPQFDALRRLIQSNPAALPTVLQQIGSQSPELLRLIHANQEEFVRMLNEPIAESAAPAAGASPFGDADAGGMPSPQQLQQL------------MASLSPQQQAAMAAQMGMTPDQLQXXXXXXXXXXXXXXAQMMQNMQA--GGGV-----------GAPTRIHLTEEEAAAVGRLCDMGFDRNEVIQAYLACDKNEALAANFLMDS-MSGD 391          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A6T7K158_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7K158_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.520e-56
Identity = 138/306 (45.10%), Postives = 168/306 (54.90%), Query Frame = 1
Query:    7 PAAAAPAAAELNPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPV-VPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXX---GGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGGLG 912
            PA AAP A +     +  LT MGFPE +A+A LRAA GN DIAVEFLMNGIP  + A  A            A   G+++ G P  L ALR HPQFDALRRLVQS+P  LQ VL QIGQQ PELL  I++NQ +F+ MMNEP+ V                                         L +M P +   MA+ M ++PEQL+             FQ+ M       GGG       XXXX   G  P ++RLT +E AAV R++E+GFDRA+AAQA+LACDKNEA+AANLLMDGG G
Sbjct:  112 PAVAAPPADDFPAEVINNLTGMGFPEAEARACLRAASGNPDIAVEFLMNGIPPAVQAQQA------------AATTGSSSSGEP--LAALRSHPQFDALRRLVQSNPQTLQAVLTQIGQQQPELLREINANQAQFLEMMNEPIAVDPAAAPSVAPTVSSPAAPTGTGGMPAGLMEGMGNPAQMAQMLQSMSPNELNEMASMMNLSPEQLTATAQMISQMPPEQFQEYMMQAMQQGGGGMGMPGMMXXXXXXGGSQPQMLRLTEDEMAAVDRLTEMGFDRADAAQAFLACDKNEALAANLLMDGGFG 403          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: D7FMK9_ECTSI (UV excision repair protein RAD23B homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMK9_ECTSI)

HSP 1 Score: 194 bits (494), Expect = 8.090e-55
Identity = 157/328 (47.87%), Postives = 182/328 (55.49%), Query Frame = 1
Query:   10 AAAAPAAAEL--------NPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGGLGGDTPMYAPPVP-PRQPTAA 966
            AAAAPAAA          N   V +LTEMGFPEDQ  AALRAA GN D+AVEFLM GIP+ + A AA                 AA  GA  +L+  R HPQF+ L+RLVQ DP  L  +LQ IG+QSP LLA IH NQG+FIA+MNEP+  +          XXXXX                        L  M P QRA MAA M        XXXXXXXXXXX  FQQ+M  M+A    G           G   NVIRL+ EE AAV R++ELGF+R +AAQAYLACDKNEA+AAN L++    G  P +  P P P  PTAA
Sbjct:   97 AAAAPAAAPAXXXXXXXXNADHVRQLTEMGFPEDQVTAALRAAMGNPDVAVEFLMTGIPDNIQAAAAPA------------QAAAAPTGAMETLEDFRGHPQFNELKRLVQRDPTQLSSILQMIGRQSPNLLARIHENQGDFIALMNEPINESAPPAAAAGNAXXXXXFGPMMGSGGQANNPAQVAQL----LQGMSPAQRAQMAAAMXXXXXXXXXXXXXXXXXXXEQFQQLMGSMNAGGMPGAGMGGIPPGAGGAGGNVIRLSEEEGAAVARLTELGFERTDAAQAYLACDKNEALAANFLLNDMGAGMPPAFQAPAPVPAPPTAA 408          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A8J5M654_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M654_9STRA)

HSP 1 Score: 189 bits (481), Expect = 6.380e-54
Identity = 133/287 (46.34%), Postives = 159/287 (55.40%), Query Frame = 1
Query:   46 ADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGG 906
            A V +L +MGFPEDQ ++ALRAA  N + AVE+LM GIPE   A A        AP  GAP  GA  E    SL+ALR HPQFDALR+LVQS+PAAL  VLQQIG QSPELL LIH NQ  F+ M+NEP+                                          + ++ P+Q+A MAAQMG+TPEQL               +QMMA M     GG       XXXX    + I L+ EE AAV R+ E+GF+R +  QAYLACDKNEA+AAN LMD G
Sbjct:   75 AAVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAAAPAQT-----AAPSAGAPSAGA--EEVANSLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPI-----GTREAGSAPSGGAGAAPFDLGMGGDGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASM-----GGGGGLEGLXXXXXXXXHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSG 344          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A1W0A5Z5_9STRA (UV excision repair protein RAD23 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5Z5_9STRA)

HSP 1 Score: 189 bits (480), Expect = 6.420e-54
Identity = 132/310 (42.58%), Postives = 166/310 (53.55%), Query Frame = 1
Query:   34 ELNPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEG--MPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMD------------GGLGGDT 921
            ELN + + +L +MGFPEDQ + AL+AA  N D AVE+LMNGIP+   +P   A       AP+ GA     A+  +  +L+ALR HPQFDALRRL+Q++PAAL  VLQQIG QSPELL LIH NQ +F+ M+NEP+                                          + ++ P+Q+A MAAQMG+TP+QL               QQMM  M               XX G  P  I LT EE AA+ R+ ++GFDR EA QAYLACDKNEA+AAN LMD            GG GGD+
Sbjct:   66 ELN-STIQQLCDMGFPEDQVRLALQAAFNNPDRAVEYLMNGIPDTRHIPVSGAPP----TAPEAGAAGXXGASLASANTLEALRNHPQFDALRRLIQANPAALPTVLQQIGNQSPELLRLIHQNQEQFVRMLNEPITETSPSQQGGFGDIDDGMGGGMPTPQQLQQL-----------MASLSPEQQAQMAAQMGMTPQQLQQFSQMLSQMPPEAVQQMMQQMGGXX-----------XXAGPGPTRIHLTEEEAAAINRLCDMGFDRNEAVQAYLACDKNEALAANFLMDSMSGDYEDGASGGGFGGDS 348          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A5D6YB40_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB40_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.140e-53
Identity = 135/285 (47.37%), Postives = 164/285 (57.54%), Query Frame = 1
Query:   46 ADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMD 900
            A V +L EMGFPEDQ + AL+AA  N D AVE+LMNGIPE +   AA            AP+ G A      SL+ALR HPQFDALR+L+Q++PAAL  VLQQIG QSPELL LIH NQ +F+AM+NEP+                                          + ++ P+Q+A MAAQMG+TP+QL               +QMMA M     GG    XXXXXXXGG+   I LT EE AA+ R+ ++GFDR EA QAYLACDKNEA+AAN LMD
Sbjct:  151 ATVQQLCEMGFPEDQVRQALQAAFNNPDRAVEYLMNGIPETVAPPAATAA---------APLAGGAAN----SLEALRNHPQFDALRQLIQANPAALPAVLQQIGGQSPELLRLIHQNQDQFVAMLNEPITTPSSSVPAATGAAPLDFGGLGGGGAMPTPQQIQQL------VDSLTPEQQAQMAAQMGMTPDQLRGLSQMLSNLPPGAMEQMMASM-----GGDGAGXXXXXXXGGHR--IMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMD 409          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A225X0I0_9STRA (UV excision repair protein RAD23 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A225X0I0_9STRA)

HSP 1 Score: 191 bits (485), Expect = 1.460e-53
Identity = 132/299 (44.15%), Postives = 161/299 (53.85%), Query Frame = 1
Query:   28 AAELNPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALA------ADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGG 906
            A E   A V +L +MGFPEDQ ++ALRAA  N + AVE+LM GIPE   A A      A+GG G  A    A  G  A      +L+ALR HPQFDALR+LVQS+PAAL  VLQQIG QSPELL LIH NQ  F+ M+NEP+                                          + ++ P+Q+A MAAQMG+TPEQL               +QMMA M    GGG           G + + I L+ EE AAV R+ E+GF+R +  QAYLACDKNEA+AAN LMD G
Sbjct:  154 AGEQMSATVQQLVDMGFPEDQVRSALRAAFNNPERAVEYLMTGIPEQAVAPAQTAAPSAEGGAGASAATATAVTGDEAN-----TLEALRNHPQFDALRQLVQSNPAALPAVLQQIGAQSPELLRLIHQNQDRFVQMLNEPI------GTRDAGATPSGAGAAPFDLGMGGGGAMPTPQQIQQLVDSLTPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEQMMASMG---GGGGLEGLGGGAGAGADGHRIMLSEEEAAAVDRLCEMGFERTDVIQAYLACDKNEALAANFLMDSG 438          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: A0A024TCU4_9STRA (UV excision repair protein RAD23 n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TCU4_9STRA)

HSP 1 Score: 189 bits (479), Expect = 3.830e-53
Identity = 133/306 (43.46%), Postives = 164/306 (53.59%), Query Frame = 1
Query:    7 PAAAAPA--AAELNPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMDGGLGGD 918
            PAA AP     E     V +L +MGFPEDQ +AAL+AA  N + AVE+LMNGIPE  PA          AP        +   GAP SL+ALR HPQFDALRR++Q++P+AL  VLQQIG Q+P+LL LIH NQ +F+AM+NEP+  A                                       + ++ PQQ+AAMAAQMG+T EQL                Q+M  M+   GG             G P  I LT EE AAV R+ ++GFDR E  QAYLACDKNEA+AAN LMD  + GD
Sbjct:  124 PAAGAPGIVVGEALSETVRQLVDMGFPEDQVRAALQAAFHNPERAVEYLMNGIPE-QPA----------APPASTTAPASGGLGAPTSLEALRHHPQFDALRRMIQANPSALPTVLQQIGAQNPQLLQLIHQNQEQFVAMLNEPIAEAATPSATPSVPASPFGDSGADGMPTPQQLQQL--------MASLSPQQQAAMAAQMGMTYEQLQQFTQMLNTMPPEAMAQLMQQMAGGEGGH------------GAPTRIHLTEEEAAAVGRLVDMGFDRNEVIQAYLACDKNEALAANFLMDS-MSGD 397          
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Match: K3WIJ7_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WIJ7_GLOUD)

HSP 1 Score: 189 bits (479), Expect = 7.310e-53
Identity = 138/285 (48.42%), Postives = 164/285 (57.54%), Query Frame = 1
Query:   46 ADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLMNGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDALRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHAMPPQQRAAMAAQMGVTPEQLSXXXXXXXXXXXXXFQQMMAGMSAVMGGGXXXXXXXXXXXGGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMD 900
            A V +L EMGFPEDQ + AL+AA  N D AVE+LMNGIPE   A A           G AP G AA      SL+ALR HPQFDALR+L+QS+PAAL  VLQQIG QSPELL LIH NQ +F+ M+NEP+                                          + ++ P+Q+A MAAQMG+TPEQL               ++MMA M     GG  XXXXXXXXXG   + I LT EE AA+ R+ ++GFDR EA QAYLACDKNEA+AAN LMD
Sbjct:  155 AAVQQLVEMGFPEDQVRRALQAAYNNPDRAVEYLMNGIPEQTSAPAPSA-------TGAAPSGDAAN-----SLEALRNHPQFDALRQLIQSNPAALPAVLQQIGGQSPELLRLIHQNQDQFVQMLNEPITTPSSSAPSAGGAGASPFDLGGLGGGAVPTSQQIQQL-----VESLSPEQQAQMAAQMGMTPEQLRGLSQMLSNLPPGAMEEMMASM-----GGQGXXXXXXXXXG---HRIMLTEEEAAAIDRLCDMGFDRNEAVQAYLACDKNEALAANFLMD 414          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14610.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DGQ1_HETAK8.900e-5857.65Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A6G0WDE9_9STRA9.190e-5850.87UV excision repair protein RAD23 n=1 Tax=Aphanomyc... [more]
A0A6T7K158_9STRA4.520e-5645.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
D7FMK9_ECTSI8.090e-5547.87UV excision repair protein RAD23B homolog n=1 Tax=... [more]
A0A8J5M654_9STRA6.380e-5446.34Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A1W0A5Z5_9STRA6.420e-5442.58UV excision repair protein RAD23 n=1 Tax=Thraustot... [more]
A0A5D6YB40_9STRA1.140e-5347.37Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225X0I0_9STRA1.460e-5344.15UV excision repair protein RAD23 n=13 Tax=Phytopht... [more]
A0A024TCU4_9STRA3.830e-5343.46UV excision repair protein RAD23 n=2 Tax=Aphanomyc... [more]
K3WIJ7_GLOUD7.310e-5348.42Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14610contigP-wetherbeei_contig14610:45..1696 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FMK9
Preferred nameRad23
PFAMsUBA,XPC-binding,ubiquitin
Model size981
Max annot lvl2759|Eukaryota
KEGG koko:K10839,ko:K18180
KEGG Pathwayko03420,ko04141,ko04714,map03420,map04141,map04714
Hectar predicted targeting categoryother localisation
GOsGO:0002020,GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005815,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006289,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0015630,GO:0016579,GO:0019222,GO:0019538,GO:0019899,GO:0019900,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0031593,GO:0031647,GO:0031648,GO:0031974,GO:0031981,GO:0032268,GO:0032270,GO:0032434,GO:0032436,GO:0032991,GO:0033554,GO:0034641,GO:0036211,GO:0042176,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043900,GO:0043902,GO:0043903,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0045069,GO:0045070,GO:0045732,GO:0045787,GO:0045862,GO:0046483,GO:0048518,GO:0048522,GO:0048524,GO:0050789,GO:0050792,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0051726,GO:0060255,GO:0061136,GO:0065007,GO:0065008,GO:0070013,GO:0070646,GO:0070647,GO:0071704,GO:0080090,GO:0090304,GO:0097159,GO:0140030,GO:1901360,GO:1901363,GO:1901564,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1903900,GO:1903902,GO:1990381,GO:2000058,GO:2000060
Exons3
Evalue1.33e-55
EggNOG OGsCOG5272@1|root,KOG0011@2759|Eukaryota
Descriptiondamaged DNA binding
Cds size981
COG categoryO
BRITEko00000,ko00001,ko03029,ko03051,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186027.672683-CDS-P-wetherbeei_contig14610:44..3891683186027.672683-CDS-P-wetherbeei_contig14610:44..389Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14610 45..389 -
1683186027.6830974-CDS-P-wetherbeei_contig14610:708..10021683186027.6830974-CDS-P-wetherbeei_contig14610:708..1002Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14610 709..1002 -
1683186027.691915-CDS-P-wetherbeei_contig14610:1354..16961683186027.691915-CDS-P-wetherbeei_contig14610:1354..1696Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14610 1355..1696 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14610.2.1prot_P-wetherbeei_contig14610.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14610 45..1696 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14610.2.1

>prot_P-wetherbeei_contig14610.2.1 ID=prot_P-wetherbeei_contig14610.2.1|Name=mRNA_P-wetherbeei_contig14610.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=327bp
PAPAAAAPAAAELNPADVARLTEMGFPEDQAQAALRAAGGNGDIAVEFLM
NGIPEGMPALAADGGGGGVAPDGGAPVGGAATEGAPASLDALRRHPQFDA
LRRLVQSDPAALQQVLQQIGQQSPELLALIHSNQGEFIAMMNEPVVPATP
AGGSGGAGAGAGGMGGLGGMGALGGLGGANPAQMAQMLHAMPPQQRAAMA
AQMGVTPEQLSQVAQMIGAMPPDQFQQMMAGMSAVMGGGMGGMSGGMGGG
GGNPNVIRLTAEEDAAVTRISELGFDRAEAAQAYLACDKNEAMAANLLMD
GGLGGDTPMYAPPVPPRQPTAAPAPAP
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mRNA from alignment at P-wetherbeei_contig14610:45..1696-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14610.2.1 ID=mRNA_P-wetherbeei_contig14610.2.1|Name=mRNA_P-wetherbeei_contig14610.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1652bp|location=Sequence derived from alignment at P-wetherbeei_contig14610:45..1696- (Phaeothamnion wetherbeei SAG_119_79)
CCGGCACCTGCCGCCGCCGCGCCGGCGGCGGCCGAGCTCAACCCCGCAGA CGTCGCCCGGCTCACGGAGATGGGCTTCCCGGAGGACCAGGCGCAGGCCG CCCTCCGCGCCGCCGGCGGCAACGGCGACATCGCCGTGGAATTCCTTATG AATGGCATCCCTGAAGGCATGCCGGCGCTGGCGGCCGATGGCGGGGGCGG CGGCGTCGCGCCCGATGGCGGCGCCCCCGTTGGCGGCGCGGCCACGGAGG GCGCGCCGGCGTCGCTGGACGCCCTTCGGAGGCACCCGCAGTTCGACGCG CTGCGCCGCCTCGTGCAGAGCGACCCCGCAGCATTGCAGCAGGTCAGTTT CCGGGAAAGTGCCGGTAAAGGTCCCTCAATGCGTCTTGTTGCGTACCGGT CGGGACAGTTGCGCAGGTCGACGGGATTGTCTTTTTGTTCAGGGTCGCGA TTCTGTCGCGTTGTTATGCAACTGCGTCTGTCGCGCGATGCGAAGTCCAT CCGTTACTTTGTTCCCTCCAACTTCTTCTCTCCTTCTGCCACCAGCCCCT CATTGGCGTTGCTACCCGCCTCGCTGCTTTCTGACTTTTATTTGTCCCAT TTTTCCTTGTTTTCTCTGCTGCTGTCTGGCTGCTGCGACTTCTTCTCGTC TGCCCCTTTGCTTTCCCTTCCTTTGCCCTTCGCCTTTCGAACAGGTCCTA CAGCAGATCGGGCAGCAGTCACCGGAGCTCTTGGCGCTCATTCACTCCAA CCAGGGCGAGTTCATCGCCATGATGAACGAGCCGGTTGTGCCCGCCACGC CGGCTGGTGGGAGCGGCGGCGCCGGCGCCGGCGCCGGCGGCATGGGCGGC CTTGGCGGCATGGGCGCGCTCGGCGGACTGGGCGGCGCCAACCCGGCGCA GATGGCGCAGATGCTCCACGCCATGCCGCCGCAGCAGCGGGCGGCGATGG CGGCGCAGATGGGTGTCACCCCCGAGCAGCTGTCGCAGGTGAGCTGAGGG ATAAATAGAATGCTCTGGGGCCGGCTGCAACACGTGGTCTTTCGACGCAG CTTCGCAGCTTGAGCGGGCGCTTACTTGCTTGCGGGATTTCTGAGGCGTC CGTTTGAAAGTCTTTCAGTGCGAACAAATCGGCGCGGCGAATTTTGAGAG GAAAAACGCTGGAAGATCTGGCGCGTGAGGCGCTTCGGTTGGGCTTTGCA GAGAAAAGGGCGCTGATAATACCACTCTCTGTCTAGTCTGTGCGGAGTCC TTGACCGTTCCCCCATGTGCCATCGAACCCTGCAAACACACCAACCCCAA CAAACAGGTGGCCCAAATGATCGGCGCCATGCCGCCGGATCAGTTCCAGC AGATGATGGCCGGCATGAGCGCGGTAATGGGCGGCGGCATGGGCGGCATG AGCGGCGGGATGGGGGGTGGCGGAGGCAACCCCAACGTGATCCGCCTGAC AGCCGAAGAGGACGCTGCCGTCACGCGAATCTCTGAGCTCGGCTTCGACC GCGCCGAGGCGGCTCAGGCCTACCTCGCCTGCGACAAGAACGAGGCGATG GCCGCCAATCTGCTGATGGATGGCGGCCTCGGTGGCGACACGCCCATGTA TGCACCGCCGGTGCCGCCGCGGCAGCCGACGGCGGCGCCCGCCCCGGCCC CG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14610:45..1696-

>mRNA_P-wetherbeei_contig14610.2.1 ID=mRNA_P-wetherbeei_contig14610.2.1|Name=mRNA_P-wetherbeei_contig14610.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=981bp|location=Sequence derived from alignment at P-wetherbeei_contig14610:45..1696- (Phaeothamnion wetherbeei SAG_119_79)
CCGGCACCTGCCGCCGCCGCGCCGGCGGCGGCCGAGCTCAACCCCGCAGA
CGTCGCCCGGCTCACGGAGATGGGCTTCCCGGAGGACCAGGCGCAGGCCG
CCCTCCGCGCCGCCGGCGGCAACGGCGACATCGCCGTGGAATTCCTTATG
AATGGCATCCCTGAAGGCATGCCGGCGCTGGCGGCCGATGGCGGGGGCGG
CGGCGTCGCGCCCGATGGCGGCGCCCCCGTTGGCGGCGCGGCCACGGAGG
GCGCGCCGGCGTCGCTGGACGCCCTTCGGAGGCACCCGCAGTTCGACGCG
CTGCGCCGCCTCGTGCAGAGCGACCCCGCAGCATTGCAGCAGGTCCTACA
GCAGATCGGGCAGCAGTCACCGGAGCTCTTGGCGCTCATTCACTCCAACC
AGGGCGAGTTCATCGCCATGATGAACGAGCCGGTTGTGCCCGCCACGCCG
GCTGGTGGGAGCGGCGGCGCCGGCGCCGGCGCCGGCGGCATGGGCGGCCT
TGGCGGCATGGGCGCGCTCGGCGGACTGGGCGGCGCCAACCCGGCGCAGA
TGGCGCAGATGCTCCACGCCATGCCGCCGCAGCAGCGGGCGGCGATGGCG
GCGCAGATGGGTGTCACCCCCGAGCAGCTGTCGCAGGTGGCCCAAATGAT
CGGCGCCATGCCGCCGGATCAGTTCCAGCAGATGATGGCCGGCATGAGCG
CGGTAATGGGCGGCGGCATGGGCGGCATGAGCGGCGGGATGGGGGGTGGC
GGAGGCAACCCCAACGTGATCCGCCTGACAGCCGAAGAGGACGCTGCCGT
CACGCGAATCTCTGAGCTCGGCTTCGACCGCGCCGAGGCGGCTCAGGCCT
ACCTCGCCTGCGACAAGAACGAGGCGATGGCCGCCAATCTGCTGATGGAT
GGCGGCCTCGGTGGCGACACGCCCATGTATGCACCGCCGGTGCCGCCGCG
GCAGCCGACGGCGGCGCCCGCCCCGGCCCCG
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