mRNA_P-wetherbeei_contig1460.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1460.1.1
Unique NamemRNA_P-wetherbeei_contig1460.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A7S1EIM7_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EIM7_HEMAN)

HSP 1 Score: 208 bits (530), Expect = 1.680e-58
Identity = 122/304 (40.13%), Postives = 171/304 (56.25%), Query Frame = 1
Query:  157 GEEAFAQCLAFFQADKIILFVRAEETLKTAFPETHKAHREELRRMRAVCDDALGLVRQLEHPRLEG--WRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYPV--WHRDVCLAARAFDCLDEDNCVVLVLRSCVDEP---AAPQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRG-DHARRVVSDPVFYGWLRGRLADYFAMQQNKHAQSAA 1044
            GE    + LAFF+ DK+    R E+ +    P  H AH  EL  +  V ++A  L   L+    EG  W  +++      VRV++R   G+ +H +  +  MDA LE VLVLLNEI L  +WLPFIG S  LS  +  +R A+V V  P P+  +HRDVC  ARA D LDED CV ++ RS  D     A P+    T+R+ VD+G ++ IPL   RTRVR +   DPKM  +PA LINWIATKVC +G++ WE +A  +      G +H +R+  +P FY W+ GR+ +   +   +  + AA
Sbjct:   93 GEALVTRALAFFRDDKVFQAHRLEQRIAQEHPAVHAAHATELGAVAEVAEEAERLAADLDS---EGGAWVCVKDAKKEGDVRVWYRAEEGAELHTLKVDYDMDARLEYVLVLLNEITLLHKWLPFIGASDLLSHRSRCERIAYVKVQSPAPIMLYHRDVCFYARAIDGLDEDGCVQIIARSIEDGDFGVAHPKIVGRTVRIGVDYGCVKFIPLNRGRTRVRCVVKVDPKMQGLPAWLINWIATKVCWVGMRLWEWKARSLEGSQEAGKEHKQRMDENPEFYSWMVGRIQECLGVAPEREGKGAA 393          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A7S0LX33_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LX33_9CRYP)

HSP 1 Score: 199 bits (507), Expect = 5.510e-57
Identity = 100/224 (44.64%), Postives = 136/224 (60.71%), Query Frame = 1
Query:  349 EGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYP--VWHRDVCLAARAFDCLDEDNCVVLVLRSCVDEP---AAPQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADY 1005
            EGW  +R+ S P  + V+ R   G+ +H    E  +DAP E +LVLLNEI LF  WLPFIGGSR+L   +  +R AWV VW P+P  V HRDVCL ARA D LDED CV+++LRS  D     A P     T R+ + FG L+L P    RTRVRA+   DPK+ ++P  LINW+ TKVC++G++ WE  A ++ +    G H  R+  +  +Y W+  R+  +
Sbjct:   14 EGWACVRQGSGPSDISVWIRHEPGNILHTFRIEGELDAPTEFLLVLLNEITLFNLWLPFIGGSRELLIPSRCERYAWVKVWSPFPALVHHRDVCLHARAIDGLDEDGCVLVLLRSFEDGDGGVAHPGLEPRTTRISLKFGALELFPTAQGRTRVRAIALLDPKINVLPGWLINWVVTKVCYMGMRRWEHHAQKLRDNKDEGPHKLRMRENADYYSWVIARVRSH 237          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: L1J639_GUITC (Uncharacterized protein n=3 Tax=Geminigeraceae TaxID=589343 RepID=L1J639_GUITC)

HSP 1 Score: 177 bits (448), Expect = 2.100e-48
Identity = 90/246 (36.59%), Postives = 143/246 (58.13%), Query Frame = 1
Query:  280 LRRMRAVCDDALGLVRQLEHPRLEGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYPVW--HRDVCLAARAFDCLDEDNCVVLVLRSCVDEPAA--PQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADY 1005
            ++++R   ++A G  + L+    +GW  +   S  + +RV+++    SPIH +   A +DAPLE +LV++NEI LF  WLPFI  S  LS+ +  +R  W  +  P P    HRD C+  RA D LDED CV+L++RS  +      P+    T+R+D+ +  ++LIP+   +T+V A G  DPK+  +P+ LINW+ATKVC++G+  W   A R++ G     H +R+  D  FY W+  R+  +
Sbjct:    1 MQQVRDASEEAEGFCKDLQGD--DGWNHVYG-SKEDDIRVWYKPEADSPIHALRVAATIDAPLEYLLVMVNEITLFPSWLPFISDSELLSKPSKCERVCWWKIKSPLPAIFSHRDSCVYGRAIDGLDEDGCVLLLIRSLEEMEGVTFPEVKPKTVRIDIKYAAVKLIPINNNKTKVVAAGSVDPKIHKLPSWLINWVATKVCYMGVILWGRNARRVAEGKKDCPHRQRMREDAEFYAWMSARVHSF 243          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A7S4UK50_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4UK50_GUITH)

HSP 1 Score: 173 bits (439), Expect = 3.720e-47
Identity = 86/223 (38.57%), Postives = 131/223 (58.74%), Query Frame = 1
Query:  349 EGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYPVW--HRDVCLAARAFDCLDEDNCVVLVLRSCVDEPAA--PQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADY 1005
            +GW  +   S  + +RV+++    SPIH +   A +DAPLE +LV++NEI LF  WLPFI  S  LS+ +  +R  W  +  P P    HRD C+  RA D LDED CV+L++RS  +      P+    T+R+D+ +  ++LIP+   +T+V A G  DPK+  +P+ LINW+ATKVC++G+  W   A R++ G     H +R+  D  FY W+  R+  +
Sbjct:   17 DGWTHVYG-SKEDDIRVWYKPEADSPIHALRVAATIDAPLEYLLVMVNEITLFPSWLPFISDSELLSKPSKCERVCWWKIKSPLPAIFSHRDSCVYGRAIDGLDEDGCVLLLIRSLEEMEGVTFPEVKPKTVRIDIKYAAVKLIPINNNKTKVVAAGSVDPKIHKLPSWLINWVATKVCYMGVILWGRNARRVAEGKKDCPHRQRMREDAEFYAWMSARVHSF 238          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A7S0UYP8_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0UYP8_9CRYP)

HSP 1 Score: 135 bits (340), Expect = 8.730e-33
Identity = 79/185 (42.70%), Postives = 106/185 (57.30%), Query Frame = 1
Query:  154 AGEEAFAQCLAFFQADKIILFVRAEETLKTAFPETHKAHREELRRMRAVCDDALGLVRQLEHPRLEG--WRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYPV--WHRDVCLAARAFDCLDEDNCVVLVLRSCVD 696
            AGEE   + LA+++ D++    R E+ +    P  H AH ++L  +  V  +A  L   L+    EG  W  +++      VRV++R   G+ +H +  +  MDA LE VLVLLNEI L  +WLPFIGGS  LS  +  +R AWV V  P P+  WHRDVC  ARAFD LDED CV +V RS  D
Sbjct:   62 AGEELVTKALAYYRDDRVFQAHRLEQRVAREHPAVHAAHAKDLGEVAEVAQEAERLAADLDS---EGGAWVCVKDAKKEGDVRVWYRAEEGAELHTLKVDYDMDARLEYVLVLLNEITLLHKWLPFIGGSDLLSHRSRCERIAWVKVRSPAPLMLWHRDVCFYARAFDGLDEDGCVQIVARSVED 243          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A151ZS43_9MYCE (START domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZS43_9MYCE)

HSP 1 Score: 102 bits (255), Expect = 1.530e-20
Identity = 62/256 (24.22%), Postives = 122/256 (47.66%), Query Frame = 1
Query:  280 LRRMRAVCDDALGLVRQLEHPRLE-GWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWVSVWLPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSCVDEPA------APQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADYFAMQQNK 1026
            L+R+R   ++   LV+ ++    + GW+ I   S+  G+   ++E  GS +H I  + ++++P+  V  ++ E+ L+G W+P +  ++ L      ++  +     P+PV  RDVCL     D L+E + ++++ RS  D          P P K  +R+D       + P+   +T V+ +  TDP+MA++P  L+N++ T+ CH        ++  + +      H +  +     Y  L+     YF  +  K
Sbjct:   70 LKRLRVEHEEISELVQMMDKDHNKFGWKEI---SNSHGIHCLYKEN-GSGMHSIRMDGIIESPIFDVCAVIMEVALYGTWIPNLKEAKLLGEDNRFKKLIYARSVCPWPVSDRDVCLFGYGVDMLEEHDKIMVIARSVRDGDLDGISWKLPDPIKNVVRVDTKISGFTITPISETQTLVQVVSLTDPRMAMMPYWLLNFVTTQFCHYLFVMLRKQSKSVQSSK----HYKTAIETNPVYSELKQMAQVYFQKKATK 317          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: U6KYD3_EIMTE (Uncharacterized protein n=2 Tax=Eimeria TaxID=5800 RepID=U6KYD3_EIMTE)

HSP 1 Score: 78.2 bits (191), Expect = 1.620e-11
Identity = 60/234 (25.64%), Postives = 105/234 (44.87%), Query Frame = 1
Query:  349 EGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIG-----GSRQLSRTTPMQRSAWVSVW---LPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSCVDEP-------AAPQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADY 1005
            E W +  E  +   +++Y+R    S +     E  +DA L  ++ +LNE+DL+  W+P+       G R + R     R   + +     P+P+ +RD C+   A D L+  N   + + S   +        A P P   TLR+  + G + L+PL P +T +      DPK+      L ++I      +  K+      ++      G+HARR    P+ YG++ GRL ++
Sbjct:  417 ESWSLAIE--EQNRLKIYYRRHSSSTLLSFRVEGTVDACLLNIISVLNEMDLYKDWIPYYTFPLKLGLRDVKRLYQFGRVEQIDLLQLDFPWPMNNRDCCVEIWAADDLEHTNRFFVRVTSLDGDTTNPRVPLAIPVPPPKTLRLYCE-GAVVLVPLSPTKTFIELFWTLDPKVH-----LNDYIVNFFAKVFAKSSFHAFCKVCIEATVGEHARRRAQFPLLYGFVEGRLCEF 642          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: S8F3X6_TOXGM (Uncharacterized protein n=15 Tax=Toxoplasma gondii TaxID=5811 RepID=S8F3X6_TOXGM)

HSP 1 Score: 77.8 bits (190), Expect = 2.440e-11
Identity = 61/230 (26.52%), Postives = 100/230 (43.48%), Query Frame = 1
Query:  346 LEGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIG-----GSRQLSRTTPMQRSAWVSVW---LPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSC-----VDEPAAPQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRL 996
            L+G   +    D   V++++R+   S +     + ++D PL  VL +LNE+D+F  W+P        G +   R     R   + ++    P+PV  RD CL+  + D LD      + + SC     +     P P +GT R+  D G L L PL P   RV+ L   DP+M + P  LI ++           +     R+     R  H +R  +    Y +++ RL
Sbjct:  647 LDGTPWVLAVDDTPSVKIWNRKYHHSSLLSFRIDGLVDTPLVVVLSVLNEMDMFTDWVPSYNFPVRLGLKDAIRVAQFGRVDQLDIFKIAFPWPVNDRDACLSIWSADDLDATGSYFVRMTSCEAGEKLQGVTVPAPERGTERLHCD-GALVLHPLSPNSVRVQLLWTIDPRMNL-PDYLITFLTRVFARSAFHAFR----RVCVAALRDSHLQRRETRSYLYRFVQDRL 870          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: S8EPT9_TOXGM (Uncharacterized protein n=17 Tax=Toxoplasma gondii TaxID=5811 RepID=S8EPT9_TOXGM)

HSP 1 Score: 74.7 bits (182), Expect = 1.710e-10
Identity = 68/249 (27.31%), Postives = 120/249 (48.19%), Query Frame = 1
Query:  319 LVRQLEHPRLEGWRIIREPS------DPEGVRVYHRETLGS-PIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIG-----GSRQLSRTT--PMQRSAWVSVWLPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSCVDEPAAP-------QPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLAD 1002
            +++Q  HP + G    R+P+      + E +RV+ R    +  +     E  ++APLEA+L +LNE+DLF  W+P+       G R +  T+   + +     V  P+P+ +RD      A D  + ++ + + + +   E  +P       QPA+G  RM VD G L +IP G   + +R L HT+ +M  VP  ++ +++ K+   G  +    A + +     G+H  R   +   YG++  RL D
Sbjct:  286 VMQQPLHPLVTG----RKPNAWHHAVEEEDMRVFVRNYADNRELLTFRIEGDVEAPLEAILSVLNEVDLFKTWVPYFSRPVKLGLRDVVGTSLGRVDQLVQFHVDFPWPLSNRDALFEVWAVDDFERNSQIAVKMTTLDHESPSPRHRVPVTQPAEGVERMCVD-GNLVIIPRGSNASFLRLLWHTNCRMH-VPMKMVEFVS-KIFSRGAFSAFQSACKAAM---TGEHEARRTKNRFLYGFIEDRLRD 524          
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Match: A0A2A9MC89_9APIC (Uncharacterized protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9MC89_9APIC)

HSP 1 Score: 73.6 bits (179), Expect = 5.440e-10
Identity = 57/230 (24.78%), Postives = 103/230 (44.78%), Query Frame = 1
Query:  346 LEGWRIIREPSDPEGVRVYHRETLGSPIHGIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIG-----GSRQLSRTTPMQRSAWVSVW---LPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSC-----VDEPAAPQPAKGTLRMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIGIKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRL 996
            LE    I    D   + ++ R+   S +     E V+++ L +V+ +LNE D++  W+P+       G ++ +R +   R   + V+    P+PV  RD CL+  A D L+      + + +C     V    AP P +GT R+  + G L L P  P   +V+ L   DP++++ P +L+ ++           +     R+        H +R  + P  Y +L+ RL
Sbjct:  700 LEATPWILAVDDSPSLNIWSRKYRNSTLLSFRIEGVVESSLVSVVSVLNEQDMYKDWVPYYTFPIRFGLKECTRVSQFGRVDQLDVFKIAFPWPVNDRDACLSIWAADDLETTGSYFVRITTCDEGDNVRGVIAPPPERGTERLYCE-GALMLHPQSPASVQVQLLWTIDPRVSL-PESLLTFLTRVFARSAFHAFR----RVCAAAATDGHVQRRETRPYLYSFLQNRL 923          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1460.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A7S1EIM7_HEMAN1.680e-5840.13Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0LX33_9CRYP5.510e-5744.64Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
L1J639_GUITC2.100e-4836.59Uncharacterized protein n=3 Tax=Geminigeraceae Tax... [more]
A0A7S4UK50_GUITH3.720e-4738.57Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S0UYP8_9CRYP8.730e-3342.70Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A151ZS43_9MYCE1.530e-2024.22START domain-containing protein n=1 Tax=Tieghemost... [more]
U6KYD3_EIMTE1.620e-1125.64Uncharacterized protein n=2 Tax=Eimeria TaxID=5800... [more]
S8F3X6_TOXGM2.440e-1126.52Uncharacterized protein n=15 Tax=Toxoplasma gondii... [more]
S8EPT9_TOXGM1.710e-1027.31Uncharacterized protein n=17 Tax=Toxoplasma gondii... [more]
A0A2A9MC89_9APIC5.440e-1024.78Uncharacterized protein n=1 Tax=Besnoitia besnoiti... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1460contigP-wetherbeei_contig1460:1112..3753 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX44008
PFAMsSTART
Model size1552
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.74e-50
EggNOG OGs28NG8@1|root,2S6X1@2759|Eukaryota
Cds size1212
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1460.1.1prot_P-wetherbeei_contig1460.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1460 1244..3545 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186027.2163858-UTR-P-wetherbeei_contig1460:1111..12431683186027.2163858-UTR-P-wetherbeei_contig1460:1111..1243Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1460 1112..1243 +
1683186027.2914674-UTR-P-wetherbeei_contig1460:3545..37531683186027.2914674-UTR-P-wetherbeei_contig1460:3545..3753Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1460 3546..3753 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186027.2269526-CDS-P-wetherbeei_contig1460:1243..13981683186027.2269526-CDS-P-wetherbeei_contig1460:1243..1398Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 1244..1398 +
1683186027.2369754-CDS-P-wetherbeei_contig1460:1739..18991683186027.2369754-CDS-P-wetherbeei_contig1460:1739..1899Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 1740..1899 +
1683186027.2468982-CDS-P-wetherbeei_contig1460:2035..20831683186027.2468982-CDS-P-wetherbeei_contig1460:2035..2083Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 2036..2083 +
1683186027.2616444-CDS-P-wetherbeei_contig1460:2319..25371683186027.2616444-CDS-P-wetherbeei_contig1460:2319..2537Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 2320..2537 +
1683186027.2714422-CDS-P-wetherbeei_contig1460:2718..28721683186027.2714422-CDS-P-wetherbeei_contig1460:2718..2872Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 2719..2872 +
1683186027.2803037-CDS-P-wetherbeei_contig1460:3068..35451683186027.2803037-CDS-P-wetherbeei_contig1460:3068..3545Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1460 3069..3545 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1460.1.1

>prot_P-wetherbeei_contig1460.1.1 ID=prot_P-wetherbeei_contig1460.1.1|Name=mRNA_P-wetherbeei_contig1460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=404bp
MKKQSASAGEEAFAQCLAFFQADKIILFVRAEETLKTAFPETHKAHREEL
RRMRAVCDDALGLVRQLEHPRLEGWRIIREPSDPEGVRVYHRETLGSPIH
GIMCEAVMDAPLEAVLVLLNEIDLFGQWLPFIGGSRQLSRTTPMQRSAWV
SVWLPYPVWHRDVCLAARAFDCLDEDNCVVLVLRSCVDEPAAPQPAKGTL
RMDVDFGVLQLIPLGPKRTRVRALGHTDPKMAIVPATLINWIATKVCHIG
IKTWEAEAVRISNGHGRGDHARRVVSDPVFYGWLRGRLADYFAMQQNKHA
QSAAGGHAAAAADGKVDEDASSAAAGAAESDGAAAAGPAVTESDGAAAAG
AAVTESDSATSAECLDGPAGDNAATSGANSTMGIDAAAEENPTGGDDAAI
AAG*
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mRNA from alignment at P-wetherbeei_contig1460:1112..3753+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1460.1.1 ID=mRNA_P-wetherbeei_contig1460.1.1|Name=mRNA_P-wetherbeei_contig1460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2642bp|location=Sequence derived from alignment at P-wetherbeei_contig1460:1112..3753+ (Phaeothamnion wetherbeei SAG_119_79)
CGCAGGAATCGGGAGGACTTTCTCTTTCTCTTCCCTTCGTCCCTTCTCTT TCCTTTTTTGCATTTCTTAGTGCACACATCCACTCAGCTTTAAAGAAGAG GAGCTCTTTCAACGATCGCTTGTCCCTTCACGATGAAGAAACAGAGCGCC TCGGCAGGAGAAGAGGCGTTCGCACAATGTCTTGCCTTCTTTCAGGCTGA CAAGATCATCCTCTTCGTGCGGGCAGAGGAGACGCTGAAAACCGCGTTCC CAGAGACCCACAAAGCGCACCGCGAGGAGCTCAGGAGGTAAGGTGTTCCC GCGATTCCTTCTCTAAAAGCTTACCAAGCCAATTTCGCGCTTCTTCACCA GAATTGCTTTACGAAAGTTTGGATCATCAAAAAAGCGTGGTACTATCAGT CAAGCACCCAATCTTCCAGATTTTCGACTTCTATTCTGAGCGGAGGGGGG CCAACCCGCTACTTGACCTATTAAAGCAACCGATAGCGCGTAATGTGCTT GGTTTCCCCGGGCAATGGCTTGCTCATTATTTTCGACTTTCCATCTTGCC GAAGACACAAGGAACATGTGCATTTGGGGTGCACCGCTGCCAGTATGAAA TTCTCCTTCCTCCCATTTCTTTCCCCAGGATGCGGGCGGTTTGCGACGAC GCCCTCGGCCTGGTGCGGCAGCTAGAGCACCCGCGACTGGAAGGGTGGCG TATTATCCGTGAGCCCAGCGACCCGGAGGGGGTCAGAGTCTACCACCGCG AGACGCTCGGCAGCCCCATCCATGGGATCATGTGCGAGGTGTGATTACAG CATCGACCGAGACGCTCTTTTTCGTTTGCCTGGAAGCTGTTGTGTATCAG GCTTTTGAGTTACACTAGTTTCTTCATTGTCTCATACTCTCTGTCGTTGC AGTCCCTCGGCTTCCCATGCACAGGCCGTGATGGACGCGCCGCTGGAGGC GGTGCTGGTTCTACTGAACGAGGTGAGGTCTGAAAAATTCTTATCTTCCC TCCCGCCTTCTTTGGCAATCACCGCTTGCTTCTTCCTCTCCGGCCTCTGT GGTTGTCACACTTTGACCATTCCCGACCAGAAGAAGAAGCAGTCATGCAT CCCAGCGTGAACGGAAAGGGACTGCACGATTGAATTCGACCTTCAGATAT CGCCTCCCGTTCCTCATCCCCTTTCTTGTTCCGCCTCCCGGCCACAAAAC CGAATCAGATCGACCTCTTTGGGCAGTGGCTGCCCTTTATCGGCGGCTCG CGCCAACTCTCCCGTACCACCCCGATGCAGCGCTCGGCCTGGGTCTCGGT CTGGCTGCCCTACCCGGTCTGGCACCGCGACGTTTGCCTGGCGGCGCGCG CCTTTGATTGTCTCGACGAAGACAACTGCGTCGTTTTGGTGCTGCGGAGC TGCGTCGATGAGCCGGCGGCGCCCCAGTGAGGCGATTGGGCAGGCGGGCC GGCAGAAATCGGAGAAAGAAGGGAATGTTGCTGGCGGTTTCTAGCTGGTT ATATTGATTGGTGGTGGTGAATGCTGCGTTTGCCCAGATAGATCTTCGCT GTTGCAGCCGCTGCCACTCACTGACGTGCTGTCGCTGCCCCGTCTTGACC ATGCCAGGCCGGCCAAGGGGACGCTGCGAATGGATGTCGACTTCGGAGTC CTGCAGCTCATTCCGCTCGGGCCGAAGCGGACACGGGTCCGGGCCCTCGG CCACACGGACCCCAAGATGGCGATAGTTCCGGCGACGTTGATCAACTGGA TAGCCACCAAAGCAAGTTGGAAATTTGGCGCGGGCAGAACCTTTCTACCT GCACATTTTGCTGTAATTTATTTATCTGTTGTTGACGGTTCGAAGGCGGC ACTGTGTGGGAGACCTCTTCTTTCGCTTCATCCAACTTTTTTTCCTGATA TAGATTAACAAGCAAAAGCTATGTTCCTATTCATCATCGCCGCCCCGGCT GACCCAGGTGTGCCACATTGGCATCAAGACGTGGGAGGCGGAGGCGGTGC GCATCTCCAACGGCCACGGCCGCGGCGACCACGCCCGGCGCGTCGTCTCG GACCCCGTTTTCTACGGCTGGTTGCGGGGCCGTCTCGCCGACTACTTCGC AATGCAGCAGAACAAGCATGCCCAGTCTGCTGCCGGTGGCCACGCCGCCG CCGCCGCCGACGGCAAGGTCGATGAAGACGCCAGCTCTGCTGCCGCCGGC GCTGCCGAGAGTGACGGCGCTGCCGCCGCGGGGCCAGCCGTTACCGAGAG CGACGGCGCTGCCGCCGCGGGGGCAGCCGTTACCGAGAGCGACAGCGCCA CGTCTGCCGAGTGCCTCGATGGCCCCGCCGGCGACAATGCCGCCACCAGC GGCGCTAACAGCACCATGGGCATCGATGCGGCTGCTGAGGAAAACCCCAC GGGCGGGGACGATGCGGCGATCGCCGCGGGCTGATGGTGGCGGCTTGATT CGGTTATTGCAGTTGAGGTGTAAGGGTGAAATGAGAGGAAGGAGCGCTTG TCTCGGGTGGACGGAGACAGCACGGCGCGTATATTATAAGAGAGCTTTAT GAGTGGGCGGGCTTCTGAATGTTTTTTGTTTTTTTGGTATAAAATAAGAC TATGCTGCTCGGAATGCACTGGGCACAAGCGGATTTAGAAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1460:1112..3753+

>mRNA_P-wetherbeei_contig1460.1.1 ID=mRNA_P-wetherbeei_contig1460.1.1|Name=mRNA_P-wetherbeei_contig1460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1212bp|location=Sequence derived from alignment at P-wetherbeei_contig1460:1112..3753+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAGAAACAGAGCGCCTCGGCAGGAGAAGAGGCGTTCGCACAATGTCT
TGCCTTCTTTCAGGCTGACAAGATCATCCTCTTCGTGCGGGCAGAGGAGA
CGCTGAAAACCGCGTTCCCAGAGACCCACAAAGCGCACCGCGAGGAGCTC
AGGAGGATGCGGGCGGTTTGCGACGACGCCCTCGGCCTGGTGCGGCAGCT
AGAGCACCCGCGACTGGAAGGGTGGCGTATTATCCGTGAGCCCAGCGACC
CGGAGGGGGTCAGAGTCTACCACCGCGAGACGCTCGGCAGCCCCATCCAT
GGGATCATGTGCGAGGCCGTGATGGACGCGCCGCTGGAGGCGGTGCTGGT
TCTACTGAACGAGATCGACCTCTTTGGGCAGTGGCTGCCCTTTATCGGCG
GCTCGCGCCAACTCTCCCGTACCACCCCGATGCAGCGCTCGGCCTGGGTC
TCGGTCTGGCTGCCCTACCCGGTCTGGCACCGCGACGTTTGCCTGGCGGC
GCGCGCCTTTGATTGTCTCGACGAAGACAACTGCGTCGTTTTGGTGCTGC
GGAGCTGCGTCGATGAGCCGGCGGCGCCCCAGCCGGCCAAGGGGACGCTG
CGAATGGATGTCGACTTCGGAGTCCTGCAGCTCATTCCGCTCGGGCCGAA
GCGGACACGGGTCCGGGCCCTCGGCCACACGGACCCCAAGATGGCGATAG
TTCCGGCGACGTTGATCAACTGGATAGCCACCAAAGTGTGCCACATTGGC
ATCAAGACGTGGGAGGCGGAGGCGGTGCGCATCTCCAACGGCCACGGCCG
CGGCGACCACGCCCGGCGCGTCGTCTCGGACCCCGTTTTCTACGGCTGGT
TGCGGGGCCGTCTCGCCGACTACTTCGCAATGCAGCAGAACAAGCATGCC
CAGTCTGCTGCCGGTGGCCACGCCGCCGCCGCCGCCGACGGCAAGGTCGA
TGAAGACGCCAGCTCTGCTGCCGCCGGCGCTGCCGAGAGTGACGGCGCTG
CCGCCGCGGGGCCAGCCGTTACCGAGAGCGACGGCGCTGCCGCCGCGGGG
GCAGCCGTTACCGAGAGCGACAGCGCCACGTCTGCCGAGTGCCTCGATGG
CCCCGCCGGCGACAATGCCGCCACCAGCGGCGCTAACAGCACCATGGGCA
TCGATGCGGCTGCTGAGGAAAACCCCACGGGCGGGGACGATGCGGCGATC
GCCGCGGGCTGA
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