mRNA_P-wetherbeei_contig14590.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A836CNH3_9STRA (Amino acid permease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH3_9STRA) HSP 1 Score: 249 bits (635), Expect = 9.970e-75 Identity = 141/257 (54.86%), Postives = 164/257 (63.81%), Query Frame = 1
Query: 1 LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
L QV LL GD+ LLSGVYTFAFLGVMSIFS GCI+LKFKRP LPR+ TV+Y+ I + L VLT F N++ KPEILS+F+LYF VG VVL VFQRIR+LK + +KE ++E++ P +FFCK DDLY INKAILYVRENEQT RLLVVHV+ D E K LS HI MFDT+YP+IKISLLTV G FSP LIEWLSREL++ KNMM
Sbjct: 436 LATTQVYLLRGDITLLSGVYTFAFLGVMSIFSSGCIILKFKRPKLPRDVTVSYAAIAIGLTFVLTAFVGNMISKPEILSYFSLYFIAVGLVVLSVFQRIRILK-------------------------------------------------VNFLKEQISELRSQPYLFFCKADDLYTINKAILYVRENEQTDRLLVVHVSPDTEGGHIKALSNHIMMFDTMYPRIKISLLTVEGTFSPALIEWLSRELAVPKNMM 643
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: D7FXC3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC3_ECTSI) HSP 1 Score: 251 bits (640), Expect = 1.210e-74 Identity = 132/255 (51.76%), Postives = 170/255 (66.67%), Query Frame = 1
Query: 1 LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKN 765
L +QV++L GD+ LSGVYTF+FLGVM++FSVG I+LKFKRPSLPRE TV+Y+T ++ + CV+T F N+L KPE++SWF +YF VG VV++VF R+RLLK+L+ A C ++K+ ++E+QD P +FFCK D YVINKAILYVR+NE T RL+VVH + D E K LSKHIEMFDT+YPKIKISLLTVTG+FSP I+WLS+EL + KN
Sbjct: 525 LATSQVIILQGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAHPVCCDGVT-----------------------------------SSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLSQELGVLKN 744
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A6H5L6K0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6K0_9PHAE) HSP 1 Score: 237 bits (605), Expect = 3.340e-74 Identity = 130/244 (53.28%), Postives = 168/244 (68.85%), Query Frame = 1
Query: 13 QVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSR 744
Q +L GD+ LSGVYTF+FLGVM++FSVG I+LKFKRPSLPRE TV+Y+T ++ + CV+T F N+L KPE++SWF +YF VG VV++VF R+RLLK+L+ A C + Q R + P+ G ++K+ ++E+QD P +FFCK D YVINKAILYVR+NE T RL+VVH + D E K LSKHIEMFDT+YPKIKISLLTVTG+FSP I+WLS+
Sbjct: 68 QFMLRKGDITTLSGVYTFSFLGVMTLFSVGTILLKFKRPSLPREVTVSYATTLVGITCVITAFVGNMLSKPEVVSWFLIYFMAVGFVVVLVFLRVRLLKILLKFAQPVCCGGRTFFFFQTRCGL--ARRFFPSFSIPYVFLFSEDGV-TSSIKDQLHELQDEPFVFFCKQPDTYVINKAILYVRDNEHTNRLIVVHCSNDVEGATIKTLSKHIEMFDTMYPKIKISLLTVTGSFSPGTIDWLSQ 308
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A7S4EFJ8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EFJ8_9STRA) HSP 1 Score: 187 bits (474), Expect = 4.410e-51 Identity = 110/275 (40.00%), Postives = 167/275 (60.73%), Query Frame = 1
Query: 1 LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLI-LLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDS-------------PGAK----LKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
L +QV++L DV L GVY +AFL VM+IF++G I+LK KRPSLPRE T ++ ++ L+ V+ NVLGKPE+L++F +YF +VGT+VL++FQR+ +++LL L S KS + + +P AKK H ++ + P + L+ + V + Q+ P IFF K+DDL++ NKA+LY+++NEQT +++ VH T + + TKNL +H+++ D +YP++KISLL V F +EWLSR L I N M
Sbjct: 421 LCVSQVIVLDCDVEALGGVYCYAFLTVMTIFALGNILLKIKRPSLPREITTSWLQSILGLIAVVIALLGNVLGKPELLTYFFVYFLIVGTLVLVMFQRVNIVRLLYKLFKSFQKKSVDVGSLYSEETEDEPLL----AKKFGHVTASNDDEEDGMVSERVPEPPKRDESCLERIANTVKQFQETPFIFFMKHDDLHMANKAVLYIQKNEQTNKIIFVHCTTNSTRKSTKNLQEHVKLLDLLYPRVKISLLVVNSKFDATTVEWLSRTLEIPTNAM 691
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: W7U6R6_9STRA (Transmembrane protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6R6_9STRA) HSP 1 Score: 182 bits (463), Expect = 1.470e-49 Identity = 104/252 (41.27%), Postives = 148/252 (58.73%), Query Frame = 1
Query: 16 VLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
VL+L G+V LSGVY+ AFL V+ +F+VG ++LKFKRPSLPR+ TV++ ++V+A +L N++G P++L F Y GT+VL++FQ LL+ +L+ C PG +++ + Q +P IFFCK DD+YV+NKA+LYV NEQ++ L+V+HV D + LS H+E FDT+YPKIK +LLT+ G F PPLIE+L REL + NMM
Sbjct: 470 VLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGIC-----------------------------------PGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHV-HDKDQFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMM 685
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A4D9CZ99_9STRA (SET domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZ99_9STRA) HSP 1 Score: 182 bits (462), Expect = 7.420e-49 Identity = 104/252 (41.27%), Postives = 148/252 (58.73%), Query Frame = 1
Query: 16 VLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
VL+L G+V LSGVY+ AFL V+ +F+VG ++LKFKRPSLPR+ TV++ ++V+A +L N++G P++L F Y GT+VL++FQ LL+ +L+ C PG +++ + Q +P IFFCK DD+YV+NKA+LYV NEQ++ L+V+HV D + LS H+E FDT+YPKIK +LLT+ G F PPLIE+L REL + NMM
Sbjct: 470 VLILEGNVTDLSGVYSLAFLSVLLLFTVGTMLLKFKRPSLPRDVTVSWMSVVVAFTMILVGLLGNLMGNPQVLLVFLAYVAAAGTLVLLMFQWTNLLRFTVLVLRGIC-----------------------------------PGIDTGVLQKELALTQSIPAIFFCKADDVYVLNKALLYVTANEQSRHLMVIHV-HDKDHFPPPLLSTHVENFDTMYPKIKCTLLTIEGHFGPPLIEFLHRELKVPINMM 685
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: F0W2I3_9STRA (Uncharacterized protein AlNc14C10G1230 n=2 Tax=Albugo TaxID=65356 RepID=F0W2I3_9STRA) HSP 1 Score: 177 bits (448), Expect = 1.470e-47 Identity = 99/255 (38.82%), Postives = 152/255 (59.61%), Query Frame = 1
Query: 10 NQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKL-KAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
+ V++L G+ LSGVYT+AFLG+M++F GC++LKFKR +PR + + ++ + V+TT F N+LG P IL++F+LYF V VV ++F+R +L++ + H C S N+ PQQ + + + GA+ K + ++EI + + FFCK +L ++NKAILYVR NEQT L +VH + ES T ++ + +FD IY K+KI+ L V G F P ++EW+SR +KNMM
Sbjct: 418 SLVVILKGNTETLSGVYTYAFLGLMTLFGTGCMLLKFKRADIPRSTVAPWWSCIVGVAMVVTTAFGNLLGDPTILTYFSLYFLSVLLVVYVMFERTFILRICLYCLRHLCPSRGNYHQPQQ--------------RLMYDQDNIRTGARGGKTIARFIHEINEQAIYFFCKRPNLSILNKAILYVRTNEQTNTLFIVHCYTEEESSNTNEFAETVLLFDHIYLKLKINFLAVEGQFGPAMVEWISRTYKQSKNMM 658
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A1E7ERC1_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ERC1_9STRA) HSP 1 Score: 176 bits (445), Expect = 3.670e-47 Identity = 95/257 (36.96%), Postives = 148/257 (57.59%), Query Frame = 1
Query: 1 LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
L +QV+LL DV L GVY +AFL VM+IF++G I+LK KRP+LPRE T ++ ++ L+ V+ N+LGKPE+L++F +YF ++GT+VL++FQR + L + + + + K ++ + + V QD+P +FF K+DDL++ NKA+LY+R+NEQT +++ VH T NL H+++ D +YP+IKISLL V F+ +EWLSR + + N M
Sbjct: 424 LCVSQVILLDSDVEALGGVYCYAFLTVMTIFALGNILLKIKRPTLPREITTSWLQSILGLVSVVIALLGNILGKPELLTYFFVYFLIIGTLVLVMFQRTQKTNLSFQIYTTMILALTTKK------------------------------REIITIADTVKNFQDIPFVFFVKHDDLHMANKAVLYIRKNEQTNKIIFVHCNGTSTETSTSNLQDHVKLLDLLYPRIKISLLVVNSNFNATTVEWLSRSIEVPINAM 650
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A7S1UN14_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UN14_9STRA) HSP 1 Score: 176 bits (445), Expect = 5.130e-47 Identity = 111/289 (38.41%), Postives = 159/289 (55.02%), Query Frame = 1
Query: 1 LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVT----------------------ED-----PESQLTKNLSKH---IEMFDTIYPKIKISLLTVTGA-FSPPLIEWLSRELSIAKNMMV 774
L+ +QV++LHGDV+ LSGVYTFAFLGVM+ F VG I+LKFKRPSLPRE + Y+ + ++CVL TF N++GK + +S+F+ Y VG V++I+FQR+RL+KLL L+ P + +K ++E++ PMIFF K+ DLYV+NKA+LY+R+NEQT L+ HVT ED L +++SK M D +YPK+KIS L V GA + ++EW++ + I KN M+
Sbjct: 434 LSASQVIMLHGDVSGLSGVYTFAFLGVMTCFGVGTIMLKFKRPSLPREVHITYAHASLGVICVLATFLGNLMGKSDYVSYFSFYLCGVGIVIVIMFQRVRLMKLLYLVLRSLF-----------------------------------PRSSFAGLKNIISELRSGPMIFFAKHADLYVLNKAVLYMRDNEQTNELIFAHVTPLRDGKQGTFAWLTGFSLDASAEDLLENVDADTLREDVSKMEIAARMLDEMYPKLKISFLCVQGATWGADVVEWIAMKTGIDKNKMM 687
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Match: A0A1V9YY08_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YY08_9STRA) HSP 1 Score: 175 bits (443), Expect = 6.000e-47 Identity = 104/254 (40.94%), Postives = 147/254 (57.87%), Query Frame = 1
Query: 10 NQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATVAYSTIVMALLCVLTTFFANVLGKPEILSWFALYFGVVGTVVLIVFQRIRLLKLLILLASHYCKSASNWKPPQQPADPQPRRNVSSAKKNPHYSSHDSPGAKLKAMKEHVNEIQDVPMIFFCKYDDLYVINKAILYVRENEQTQRLLVVHVTEDPESQLTKNLSKHIEMFDTIYPKIKISLLTVTGAFSPPLIEWLSRELSIAKNMM 771
+ VL+L G+V LSGVYT+AFLG+M++F GC++LKFKR L R+ + T ++ + V+ FF N+ G P IL++FALYF V VV I+F+R+ L+L++ C P R S++ + +KAM++ N P +FFCK DL INKAILYVR+NEQ+ L++VHV D E ++ + I MFD IYPK+KI + + F P LIEW+S + SI KNMM
Sbjct: 404 SLVLVLEGNVETLSGVYTYAFLGLMTLFGTGCMLLKFKRADLRRDVIAPWWTCIVGVSLVIVAFFGNLCGDPTILTYFALYFSCVIFVVFIMFERLFFLRLIMYALQRIC----------------PSREKQSSEDTALATGARGGRTIVKAMRQITNAC---PTVFFCKNPDLPTINKAILYVRKNEQSCNLVIVHV-HDSEEGVSSRFGESIAMFDRIYPKLKIDFIAIQSTFGPALIEWVSTQYSIPKNMM 637 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14590.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14590.1.1 >prot_P-wetherbeei_contig14590.1.1 ID=prot_P-wetherbeei_contig14590.1.1|Name=mRNA_P-wetherbeei_contig14590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=260bp LTYNQVLLLHGDVALLSGVYTFAFLGVMSIFSVGCIVLKFKRPSLPREATback to top mRNA from alignment at P-wetherbeei_contig14590:121..1652- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14590.1.1 ID=mRNA_P-wetherbeei_contig14590.1.1|Name=mRNA_P-wetherbeei_contig14590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1532bp|location=Sequence derived from alignment at P-wetherbeei_contig14590:121..1652- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14590:121..1652- >mRNA_P-wetherbeei_contig14590.1.1 ID=mRNA_P-wetherbeei_contig14590.1.1|Name=mRNA_P-wetherbeei_contig14590.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=780bp|location=Sequence derived from alignment at P-wetherbeei_contig14590:121..1652- (Phaeothamnion wetherbeei SAG_119_79)back to top |