mRNA_P-wetherbeei_contig14576.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A523P3K6_9PROT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P3K6_9PROT) HSP 1 Score: 150 bits (380), Expect = 9.090e-41 Identity = 77/122 (63.11%), Postives = 99/122 (81.15%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDR-AIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 363
SRDY+++V+++ T+CLEGTLFDERHPRLVRVN+Y +E+ LEGQ+L TRHAD+PGVIGA+GE+LGRAGINI+RMQVGVA AIAV+G+S L++ ++ LA I A+DKVLQV F
Sbjct: 407 SRDYLAVVQVSGVTAMGTLCLEGTLFDERHPRLVRVNNYIIESELEGQILMTRHADRPGVIGAIGELLGRAGINITRMQVGVASDDKTSAIAVVGISNELSEATMESLAEIDAIDKVLQVKF 528
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A1Z8VA24_9PROT (ACT domain-containing protein (Fragment) n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A1Z8VA24_9PROT) HSP 1 Score: 129 bits (323), Expect = 1.880e-35 Identity = 64/119 (53.78%), Postives = 90/119 (75.63%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 357
S +Y+S++RITA T+ LEGT+FD R RLVRV+DY++E+ LEG++L T+HAD+PGVIG +G LG G+NISRMQVGV+ GS AIA+L VS L + ++ ++ I AV+KV+Q+
Sbjct: 59 STEYISVLRITATGPDQTVYLEGTIFDGRRARLVRVSDYDIESPLEGRLLITKHADEPGVIGMIGATLGEKGVNISRMQVGVSGGSQMAIAILAVSDELEKATMEGISRIPAVEKVMQI 177
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A3D5DFA7_9GAMM (D-3-phosphoglycerate dehydrogenase (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFA7_9GAMM) HSP 1 Score: 135 bits (339), Expect = 4.880e-35 Identity = 70/122 (57.38%), Postives = 92/122 (75.41%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVA-KGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 363
SRDY++++R++ T+ LEGTLFDERHPRLVRVNDY +E+ L G+++ TRH D+PGVIGA+G +LGR GINIS MQVG+A GS AIAV VS L+ L +L++I A+DK LQ+ F
Sbjct: 375 SRDYLTMLRVSGVTAAGTLVLEGTLFDERHPRLVRVNDYIIESELTGRIVMTRHDDRPGVIGAIGALLGREGINISSMQVGIAGDGSSEAIAVFRVSSELSIGTLQELSSIDAIDKALQIEF 496
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A1G0G3V3_9GAMM (D-3-phosphoglycerate dehydrogenase n=1 Tax=Gammaproteobacteria bacterium RBG_16_51_14 TaxID=1798265 RepID=A0A1G0G3V3_9GAMM) HSP 1 Score: 130 bits (328), Expect = 2.510e-33 Identity = 65/116 (56.03%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 10 YVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 357
Y+S++ I A+ G TI + GTLFD+RHPRLV +N Y +E L+G +L T HADKPGV+GA+G +LG+A INIS MQVG+A SD AIAVLG+S+ L ++ + AI A+ KVLQV
Sbjct: 410 YLSMLSIKARQGAETITVAGTLFDDRHPRLVGINHYPLEAPLDGNLLLTHHADKPGVVGAIGNVLGQADINISHMQVGIASDSDEAIAVLGISRLLDDSSMAAIRAIPAIHKVLQV 525
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A6L8EJF1_9GAMM (ACT domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EJF1_9GAMM) HSP 1 Score: 120 bits (302), Expect = 6.510e-33 Identity = 60/119 (50.42%), Postives = 83/119 (69.75%), Query Frame = 1
Query: 7 DYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 363
DY S V ++ NG+ + GTLF R+PRL+ +NDYE+E LEG +L TRH D+PGVI A+ +L INISRMQ+G+ GSD+AIAV+GVS L + +D+L+ I A++KV+QV
Sbjct: 10 DYHSAVSLSVHNGERETRVVGTLFHRRYPRLISINDYEIEAVLEGNLLVTRHNDQPGVIAAISNLLADERINISRMQLGIVSGSDKAIAVIGVSTPLNDELMDKLSQIEAINKVMQVSL 128
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: X0YBF9_9ZZZZ (ACT domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0YBF9_9ZZZZ) HSP 1 Score: 123 bits (308), Expect = 7.470e-33 Identity = 61/119 (51.26%), Postives = 85/119 (71.43%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 357
+ DYVSL+ + K + + + GTL ERHPRLVR++DY VE EG ++FTRH D+PGV+G+LG IL R INISRMQVGVA+G AIA++GVS ++ AL+++ AI V + +Q+
Sbjct: 87 AHDYVSLIELRGKAAQSSTSVAGTLLGERHPRLVRIDDYHVEAVPEGCLIFTRHEDRPGVVGSLGSILSRENINISRMQVGVAEGRPEAIALIGVSAPISPSALEEVQAIPGVRQAIQI 205
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A661C3V8_9GAMM (D-3-phosphoglycerate dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661C3V8_9GAMM) HSP 1 Score: 129 bits (323), Expect = 1.270e-32 Identity = 61/121 (50.41%), Postives = 89/121 (73.55%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 363
+ DY+S+V + AK I + GTL ++++ RL+++NDY++E L G +L TRH+D+PGV+GALG +LG GINIS MQVGV G D AIA++G+SQ L++ AL ++A I A+DKV+QV
Sbjct: 406 THDYISMVSVKAKFDNEEIIVSGTLLNDKYARLIQINDYQIEAPLSGNLLITRHSDQPGVVGALGVLLGEEGINISNMQVGVKDGLDEAIAIIGISQLLSETALGKVADIPAIDKVIQVSL 526
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A6I0E7F2_HYPSQ (D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A6I0E7F2_HYPSQ) HSP 1 Score: 126 bits (317), Expect = 9.300e-32 Identity = 66/119 (55.46%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 357
+RDYVSLV + AK G+ + + GTL E HPRLV ++DY VE EG ++FTRH D+PGV+GALG ILGR INISRMQVGVA+G AIA++GVS L AL+++ AI A+ + +Q+
Sbjct: 410 ARDYVSLVELRAKTGEASTSVAGTLLGESHPRLVCIDDYHVEAVPEGCLIFTRHDDRPGVVGALGGILGRENINISRMQVGVAEGRPEAIALVGVSAPLPPKALEEVRAIPAIRQAVQI 528
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A3C0BRI6_9HYPH (D-3-phosphoglycerate dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A3C0BRI6_9HYPH) HSP 1 Score: 126 bits (316), Expect = 1.300e-31 Identity = 63/119 (52.94%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQV 357
+ DY+SLV + AK + + GTL +RHPRLVR++DY VE EG ++FTRH D+PGV+GALG ILGR INISRMQVG+A+G AIA++GVS L+ AL+++ AI A+ + +Q+
Sbjct: 410 AHDYLSLVELRAKTAETLTSVAGTLLGDRHPRLVRIDDYHVEAVPEGYLIFTRHDDQPGVVGALGSILGRENINISRMQVGIAEGRAEAIALIGVSAPLSPKALEEVQAIPAIRQAVQI 528
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Match: A0A522VIM2_9GAMM (D-3-phosphoglycerate dehydrogenase n=1 Tax=Methylococcaceae bacterium TaxID=1933926 RepID=A0A522VIM2_9GAMM) HSP 1 Score: 125 bits (315), Expect = 1.750e-31 Identity = 64/121 (52.89%), Postives = 88/121 (72.73%), Query Frame = 1
Query: 1 SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLFTRHADKPGVIGALGEILGRAGINISRMQVGVAKGSDRAIAVLGVSQALAQDALDQLAAIAAVDKVLQVGF 363
S +Y+SL+ +TA + + L GTLFDER PRLVR+N+YE+E LEG +L RH D+PGV+GALG ILGRAGINISRMQ+G G+DRA+A+L +S+ L+ D + ++ I A+ K Q+
Sbjct: 408 SPNYLSLIGLTAWSDSEQVSLAGTLFDERLPRLVRINNYEIEAMLEGHILLFRHYDRPGVVGALGSILGRAGINISRMQLGDEPGTDRAVALLQLSRPLSADVMAEIEQIDAITKAGQISL 528 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14576.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14576.1.1 >prot_P-wetherbeei_contig14576.1.1 ID=prot_P-wetherbeei_contig14576.1.1|Name=mRNA_P-wetherbeei_contig14576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=122bp SRDYVSLVRITAKNGKHTICLEGTLFDERHPRLVRVNDYEVETALEGQMLback to top mRNA from alignment at P-wetherbeei_contig14576:1..366+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14576.1.1 ID=mRNA_P-wetherbeei_contig14576.1.1|Name=mRNA_P-wetherbeei_contig14576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig14576:1..366+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14576:1..366+ >mRNA_P-wetherbeei_contig14576.1.1 ID=mRNA_P-wetherbeei_contig14576.1.1|Name=mRNA_P-wetherbeei_contig14576.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=366bp|location=Sequence derived from alignment at P-wetherbeei_contig14576:1..366+ (Phaeothamnion wetherbeei SAG_119_79)back to top |