mRNA_P-wetherbeei_contig14556.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14556.2.1
Unique NamemRNA_P-wetherbeei_contig14556.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A7S4DL62_HETAK (6-pyruvoyltetrahydropterin synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DL62_HETAK)

HSP 1 Score: 197 bits (501), Expect = 1.360e-62
Identity = 93/123 (75.61%), Postives = 106/123 (86.18%), Query Frame = 1
Query:   25 FSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            FSLG+RDSIMIAHSF G+EFGPAQ++HGATYTVDVEFEA++L  K NWVVDIGEAS IL+ VL KYNFKNLNELFP +NTTTEFMC+AIF DI A C   F+G++CVKL ESHKAWA Y G+V
Sbjct:   29 FSLGVRDSIMIAHSFKGEEFGPAQQMHGATYTVDVEFEAEELVDKCNWVVDIGEASEILSNVLRKYNFKNLNELFPDDNTTTEFMCKAIFDDIAA-CLENFKGSMCVKLHESHKAWASYTGDV 150          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: D8LHK0_ECTSI (6-pyruvoyltetrahydropterin synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHK0_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.410e-62
Identity = 87/123 (70.73%), Postives = 101/123 (82.11%), Query Frame = 1
Query:   25 FSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            +SLGIRDSIMIAHSF G +FGPAQE+HGATYTVD EF+ D L  K NWVVDIG AS +L  VLSKYNFKNLNE+FPG+NTTTEFMC+ IF ++ A+C   F G +C+KLWESHKAW CY G+V
Sbjct:   33 YSLGIRDSIMIAHSFEGPQFGPAQEMHGATYTVDAEFKTDALVEKSNWVVDIGAASEMLAAVLSKYNFKNLNEIFPGQNTTTEFMCKVIFDELAAKCGKDFHGTLCIKLWESHKAWGCYEGDV 155          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: W7T312_9STRA (6-pyruvoyltetrahydropterin synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7T312_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.740e-58
Identity = 90/133 (67.67%), Postives = 107/133 (80.45%), Query Frame = 1
Query:   22 PFSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFP-GENTTTEFMCRAIFKDIVAQ-CPHG-------FRGAICVKLWESHKAWACYRGEV 393
            PFSLGIRDSIMIAHSF G++FGPAQ +HGATYTVDV F + +L PK NWV+DIGEAS+ L+ +LSKYNFKNL+++FP GENTTTEFMCRAI +D+ A  C +        F+G+ICVKLWESHKAWACY   V
Sbjct:   32 PFSLGIRDSIMIAHSFKGEQFGPAQNIHGATYTVDVTFRSKNLVPKNNWVIDIGEASTALSRILSKYNFKNLDQVFPEGENTTTEFMCRAIHRDLAAHFCTNRAKSKEERFKGSICVKLWESHKAWACYEAIV 164          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: L1J9Q7_GUITC (6-pyruvoyltetrahydropterin synthase n=3 Tax=Guillardia theta TaxID=55529 RepID=L1J9Q7_GUITC)

HSP 1 Score: 187 bits (474), Expect = 6.280e-58
Identity = 83/123 (67.48%), Postives = 102/123 (82.93%), Query Frame = 1
Query:   25 FSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            +SLG+RDSIMIAHSF+GKEFGPAQ +HGATYTVDVEF  + LAP+LNWV+DIGE  ++L +VL +YNFKNLNELFPGENTTTEFMC+ IF+ +  +    F+G+I VKLWESH AWA Y  ++
Sbjct:   63 YSLGLRDSIMIAHSFTGKEFGPAQNMHGATYTVDVEFHVESLAPRLNWVLDIGEGMTMLKKVLGEYNFKNLNELFPGENTTTEFMCKKIFEGLCVELKGKFKGSITVKLWESHSAWASYTNDI 185          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A836CJP8_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJP8_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.090e-57
Identity = 85/123 (69.11%), Postives = 98/123 (79.67%), Query Frame = 1
Query:   25 FSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            ++LGIRDSIMIAHSF G EFGPAQ++HGATYT DVEF   +L P LNWV+DIGEAS++L+ VL++YNFKNLNE+FP ENTTTEFMCR IF  +   C   F G I VKLWESHKAWA Y G V
Sbjct:   10 YTLGIRDSIMIAHSFKGAEFGPAQQMHGATYTCDVEFCCPELTPSLNWVIDIGEASNMLSGVLAEYNFKNLNEVFPDENTTTEFMCRRIFDGVARACAGRFCGTIRVKLWESHKAWASYEGAV 132          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A7S2V5M2_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5M2_9STRA)

HSP 1 Score: 183 bits (464), Expect = 6.200e-57
Identity = 85/130 (65.38%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    4 AAARLRPFSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            A A  + ++LG++DSIMIAHSF G+EFGPAQ+LHGATYTVDVEF AD L  K NWV+DIG AS IL +VL+KYNFKNL+ELFP +NTTTEFMC+ IF D+ A+  + F+G++ VKLWESHKAWA Y+ ++
Sbjct:   23 AYAHKKGYTLGVKDSIMIAHSFQGEEFGPAQKLHGATYTVDVEFMADVLESKCNWVIDIGLASEILGKVLAKYNFKNLDELFPDDNTTTEFMCKVIFDDMSAELANKFKGSLSVKLWESHKAWASYQDKL 152          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A7S0WCE1_9CRYP (6-pyruvoyltetrahydropterin synthase n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WCE1_9CRYP)

HSP 1 Score: 159 bits (401), Expect = 7.140e-47
Identity = 76/124 (61.29%), Postives = 92/124 (74.19%), Query Frame = 1
Query:   25 FSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKDIVAQCP-HGFRGAICVKLWESHKAWACYRGEV 393
            ++LG+RDSIMIAHSF G EFGPAQ +HGATYTVD+E   + LA KLNWVVDIG    IL EVL  YN+KNL+E+FPG NTTTEFM + I + + A    HG  G++ VKLWESH AWA Y  ++
Sbjct:   65 YTLGVRDSIMIAHSFKGPEFGPAQGMHGATYTVDLEVSVEKLADKLNWVVDIGVLLGILKEVLGVYNYKNLDEVFPGVNTTTEFMSQKIHEGVAAALKKHGVVGSMSVKLWESHNAWATYSNKI 188          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A7S4K2E3_9STRA (6-pyruvoyltetrahydropterin synthase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K2E3_9STRA)

HSP 1 Score: 159 bits (401), Expect = 1.190e-46
Identity = 83/134 (61.94%), Postives = 99/134 (73.88%), Query Frame = 1
Query:    7 AARLRPFSLGIRDSIMIAHSFSGKE-FGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFP-GENTTTEFMCRAIFKDI---VAQCPHGFRGAICVKLWESHKAWACYRGEV 393
            A RL PF+LG+RDS+MIAHSF G   FGPA  +HGATYT DVEF   DLA   NWV+DIG+AS IL+++LSKYN KNL+E+F  GE TTTEFMC+ I + +   V +    F+G I VKLWESHKAWA Y GEV
Sbjct:   73 AVRL-PFTLGVRDSLMIAHSFHGHPAFGPAGGMHGATYTCDVEFRCKDLAQVTNWVIDIGKASEILSDILSKYNLKNLDEVFSNGEMTTTEFMCKVIHQGVAQRVREEVKDFKGEISVKLWESHKAWASYEGEV 205          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: A0A7S2A892_TRICV (6-pyruvoyltetrahydropterin synthase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A892_TRICV)

HSP 1 Score: 158 bits (399), Expect = 1.310e-46
Identity = 80/129 (62.02%), Postives = 93/129 (72.09%), Query Frame = 1
Query:   22 PFSLGIRDSIMIAHSFSGK-EFGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFP-GENTTTEFMCRAIFKDIVAQCPHG---FRGAICVKLWESHKAWACYRGEV 393
            PF+LG+RDS+MIAHSF G   FGPA  +HGATYT DVEF    L P+ NWV+DIG AS +LT VLS+YN KNL+E+FP GE TTTEFMCR I +D+  +       F G I VKLWESHKAW  Y GEV
Sbjct:   57 PFALGVRDSLMIAHSFHGHPSFGPAGGMHGATYTCDVEFRTSHLHPECNWVIDIGLASDVLTSVLSRYNMKNLDEVFPDGEMTTTEFMCRVIHEDLCRRLKEEGAEFEGEIRVKLWESHKAWGSYVGEV 185          
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Match: B7FYC8_PHATC (6-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FYC8_PHATC)

HSP 1 Score: 156 bits (394), Expect = 3.190e-46
Identity = 80/131 (61.07%), Postives = 93/131 (70.99%), Query Frame = 1
Query:   19 RPFSLGIRDSIMIAHSFSGKE-FGPAQELHGATYTVDVEFEADDLAPKLNWVVDIGEASSILTEVLSKYNFKNLNELFP-GENTTTEFMCRAIFKDIVAQCP---HGFRGAICVKLWESHKAWACYRGEVQ 396
            R F LGIRDS+MIAHSF     FGPA  +HGATYT DVEF  D L P  NWV+DIG+AS +L  VL+KYN KNL+E+FP G+ TTTEFMC+ I  D+V       H F G +CVKLWESHKAWA Y G V+
Sbjct:   26 RSFRLGIRDSLMIAHSFHRHPAFGPAGGMHGATYTCDVEFSKDTLDPDTNWVMDIGKASELLCTVLAKYNLKNLDEVFPNGQLTTTEFMCKQIHMDLVDLIRREFHDFHGEVCVKLWESHKAWAAYSGVVK 156          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14556.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4DL62_HETAK1.360e-6275.616-pyruvoyltetrahydropterin synthase n=1 Tax=Hetero... [more]
D8LHK0_ECTSI1.410e-6270.736-pyruvoyltetrahydropterin synthase n=2 Tax=Ectoca... [more]
W7T312_9STRA2.740e-5867.676-pyruvoyltetrahydropterin synthase n=3 Tax=Monodo... [more]
L1J9Q7_GUITC6.280e-5867.486-pyruvoyltetrahydropterin synthase n=3 Tax=Guilla... [more]
A0A836CJP8_9STRA4.090e-5769.116-pyruvoyltetrahydropterin synthase n=1 Tax=Tribon... [more]
A0A7S2V5M2_9STRA6.200e-5765.386-pyruvoyltetrahydropterin synthase n=1 Tax=Fibroc... [more]
A0A7S0WCE1_9CRYP7.140e-4761.296-pyruvoyltetrahydropterin synthase n=1 Tax=Hemise... [more]
A0A7S4K2E3_9STRA1.190e-4661.946-pyruvoyltetrahydropterin synthase n=1 Tax=Odonte... [more]
A0A7S2A892_TRICV1.310e-4662.026-pyruvoyltetrahydropterin synthase n=1 Tax=Triere... [more]
B7FYC8_PHATC3.190e-4661.076-pyruvoyltetrahydropterin synthase n=2 Tax=Phaeod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14556contigP-wetherbeei_contig14556:673..1433 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LHK0
PFAMsPTPS
Model size417
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons3
Evalue2.31e-63
EggNOG OGs2CYMG@1|root,2S557@2759|Eukaryota
Ec32 ortholog description6-pyruvoyl tetrahydropterin synthase/QueD family protein
Ec32 orthologEc-10_002190.1
Description6-pyruvoyl tetrahydropterin synthase
Cds size417
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186025.8080947-CDS-P-wetherbeei_contig14556:672..7711683186025.8080947-CDS-P-wetherbeei_contig14556:672..771Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14556 673..771 +
1683186025.8253345-CDS-P-wetherbeei_contig14556:971..10791683186025.8253345-CDS-P-wetherbeei_contig14556:971..1079Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14556 972..1079 +
1683186025.8382788-CDS-P-wetherbeei_contig14556:1223..14331683186025.8382788-CDS-P-wetherbeei_contig14556:1223..1433Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14556 1224..1433 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14556.2.1prot_P-wetherbeei_contig14556.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14556 673..1433 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14556.2.1

>prot_P-wetherbeei_contig14556.2.1 ID=prot_P-wetherbeei_contig14556.2.1|Name=mRNA_P-wetherbeei_contig14556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=139bp
SAAARLRPFSLGIRDSIMIAHSFSGKEFGPAQELHGATYTVDVEFEADDL
APKLNWVVDIGEASSILTEVLSKYNFKNLNELFPGENTTTEFMCRAIFKD
IVAQCPHGFRGAICVKLWESHKAWACYRGEVQPPNNHE*
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mRNA from alignment at P-wetherbeei_contig14556:673..1433+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14556.2.1 ID=mRNA_P-wetherbeei_contig14556.2.1|Name=mRNA_P-wetherbeei_contig14556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=761bp|location=Sequence derived from alignment at P-wetherbeei_contig14556:673..1433+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGCCGCGGCGCGTCTGCGACCATTTTCCCTTGGGATCCGGGACTCGAT CATGATCGCGCACAGCTTCTCCGGAAAGGAGTTTGGTCCTGCACAAGAGG TGCTGCAGGGTTCTCAGCCCTCCTATCAAGATGTCAAGCTTCCTTTTCTC GTGTTGGTCTTAGTAGATGCCAATGCCACAAACATTTTCTGGCCTACTCC TTTTTCAATTTGTTAGCACTTTCTTTCCGATGAGTCAATGCATCCCTTTT AGCAACCGACCGGACCACCTGTGTCTTCCCTATGCTGCTTTCGCCCCAGC TCCACGGTGCCACCTACACCGTTGACGTCGAATTTGAGGCAGACGACTTG GCACCGAAGCTCAACTGGGTCGTCGACATTGGCGAGGCGTCCTCCATCCT CACAGAAGTAAGCGTTTAATGGTTAGAGAACTCTTTATTGCTTTACGTGC TCTCGCTGTGTGAAAGACCGTGGCGCAGCAGCCTCATCATGCACCCCACC TCTTCCTGCTTGACCTGCAACCAGTTCGTCTGTTCGATCTCGCTCCTCCA GGTGCTGTCAAAGTATAACTTCAAGAATCTCAACGAGCTTTTCCCTGGTG AGAATACCACGACGGAGTTCATGTGCCGCGCGATCTTCAAGGACATAGTG GCCCAGTGCCCTCACGGGTTTCGTGGCGCTATTTGCGTCAAGCTCTGGGA GAGTCATAAGGCGTGGGCCTGCTACCGGGGAGAGGTGCAACCACCAAATA ATCACGAGTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14556:673..1433+

>mRNA_P-wetherbeei_contig14556.2.1 ID=mRNA_P-wetherbeei_contig14556.2.1|Name=mRNA_P-wetherbeei_contig14556.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=417bp|location=Sequence derived from alignment at P-wetherbeei_contig14556:673..1433+ (Phaeothamnion wetherbeei SAG_119_79)
AGCGCCGCGGCGCGTCTGCGACCATTTTCCCTTGGGATCCGGGACTCGAT
CATGATCGCGCACAGCTTCTCCGGAAAGGAGTTTGGTCCTGCACAAGAGC
TCCACGGTGCCACCTACACCGTTGACGTCGAATTTGAGGCAGACGACTTG
GCACCGAAGCTCAACTGGGTCGTCGACATTGGCGAGGCGTCCTCCATCCT
CACAGAAGTGCTGTCAAAGTATAACTTCAAGAATCTCAACGAGCTTTTCC
CTGGTGAGAATACCACGACGGAGTTCATGTGCCGCGCGATCTTCAAGGAC
ATAGTGGCCCAGTGCCCTCACGGGTTTCGTGGCGCTATTTGCGTCAAGCT
CTGGGAGAGTCATAAGGCGTGGGCCTGCTACCGGGGAGAGGTGCAACCAC
CAAATAATCACGAGTAG
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