mRNA_P-wetherbeei_contig14534.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A258L5U8_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=unclassified Hyphomicrobium TaxID=2619925 RepID=A0A258L5U8_9HYPH) HSP 1 Score: 150 bits (378), Expect = 1.660e-43 Identity = 74/99 (74.75%), Postives = 85/99 (85.86%), Query Frame = 1
Query: 139 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
S+ G + SG+ SYYWQPQRVASGG FNPNAMTAAHKTLPFGT+VRVTN NNGR+V VTINDRGP++ GR+IDLS+AAA VGMT SG+A VS+ VLGR
Sbjct: 71 SVAAGGSYSGMGSYYWQPQRVASGGWFNPNAMTAAHKTLPFGTKVRVTNRNNGRSVVVTINDRGPYIKGRIIDLSKAAAKQVGMTASGIAPVSVTVLGR 169
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A2S5MEG6_HYPSQ (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A2S5MEG6_HYPSQ) HSP 1 Score: 145 bits (367), Expect = 9.250e-42 Identity = 72/101 (71.29%), Postives = 85/101 (84.16%), Query Frame = 1
Query: 133 LASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
+A +GG+ SG ASYYWQPQRVASGG FNPNAMTAAHKTLPFGT+VRVTN NNGR+V VTINDRGP++ GR+IDLS+AAA + M GSG+ VS+ V+GR
Sbjct: 75 VAYSSGGTTYSGKASYYWQPQRVASGGWFNPNAMTAAHKTLPFGTKVRVTNKNNGRSVVVTINDRGPYIKGRIIDLSKAAAHSISMQGSGVVPVSVTVIGR 175
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI000931B055 (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium sp. CS1GBMeth3 TaxID=1892845 RepID=UPI000931B055) HSP 1 Score: 145 bits (366), Expect = 1.130e-41 Identity = 73/99 (73.74%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 139 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
+ +G A SGIASYYWQ Q+ ASG FNP+AMTAAH+TLPFGT+VRVTN NNGR+VTVTINDRGPF+ GRVIDLS+ AA V+GM GSGLA VS+ VLGR
Sbjct: 72 AYSGSHAKSGIASYYWQGQKTASGARFNPSAMTAAHRTLPFGTKVRVTNRNNGRSVTVTINDRGPFIKGRVIDLSKGAAGVIGMQGSGLAPVSIEVLGR 170
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A7C2M2I1_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2M2I1_9HYPH) HSP 1 Score: 147 bits (372), Expect = 1.300e-41 Identity = 75/107 (70.09%), Postives = 89/107 (83.18%), Query Frame = 1
Query: 115 ARRGPALASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
AR A SL+ AG GIASYYWQPQRVA+GG F+PNAMTAAHKTLPFGT+VRVT++ NGR V V INDRGP+VAGR+IDLS+AAA+++GMT G+ARV + VLGR
Sbjct: 143 ARAAWAKRSLSTSGAGHGIASYYWQPQRVAAGGWFDPNAMTAAHKTLPFGTKVRVTHLGNGRTVDVKINDRGPYVAGRIIDLSKAAAALLGMTQQGIARVKVEVLGR 249
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A6N6SU47_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A6N6SU47_9HYPH) HSP 1 Score: 144 bits (364), Expect = 1.770e-40 Identity = 71/95 (74.74%), Postives = 82/95 (86.32%), Query Frame = 1
Query: 151 GSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
GS G+ASYYWQPQRVA+GG FNPNAMTAAHKTLPFGTRVRVT++ NGR+V V INDRGP+VAGR+IDLS+AAA V+GM G+ARV + VLGR
Sbjct: 149 GSGQLGVASYYWQPQRVAAGGWFNPNAMTAAHKTLPFGTRVRVTHLGNGRSVEVKINDRGPYVAGRIIDLSKAAAGVLGMQSQGIARVQVTVLGR 243
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A1I7N001_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=Hyphomicrobium TaxID=81 RepID=A0A1I7N001_9HYPH) HSP 1 Score: 142 bits (357), Expect = 2.000e-40 Identity = 74/103 (71.84%), Postives = 82/103 (79.61%), Query Frame = 1
Query: 130 ALASLTGGSAGS-GIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
A GGS GS G+ASYYWQ Q+ ASG FNP MTAAH+TLPFGTRVRVTN +NG++V VTINDRGPFV GRVIDLSR AA + MTG+GLARVSL VLGR
Sbjct: 59 AARKSVGGSGGSHGVASYYWQGQKTASGARFNPEGMTAAHRTLPFGTRVRVTNQSNGQSVVVTINDRGPFVGGRVIDLSRGAARQINMTGAGLARVSLEVLGR 161
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI00037EE49A (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium zavarzinii TaxID=48292 RepID=UPI00037EE49A) HSP 1 Score: 142 bits (359), Expect = 2.270e-40 Identity = 73/100 (73.00%), Postives = 85/100 (85.00%), Query Frame = 1
Query: 136 ASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
AS GGS +GIASYYWQ Q ASG FNP+AMTAAH+TLPFGTRV VTN +NGR+VTVTINDRGPF+ GR+IDLS+AAA +GM G+GLARVS++VLGR
Sbjct: 92 ASYGGGS--TGIASYYWQGQMTASGARFNPSAMTAAHRTLPFGTRVLVTNQSNGRSVTVTINDRGPFIKGRIIDLSKAAAGAIGMQGAGLARVSISVLGR 189
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: V5SD29_9HYPH (Endolytic peptidoglycan transglycosylase RlpA n=2 Tax=Hyphomicrobium TaxID=81 RepID=V5SD29_9HYPH) HSP 1 Score: 142 bits (359), Expect = 3.030e-40 Identity = 68/99 (68.69%), Postives = 84/99 (84.85%), Query Frame = 1
Query: 139 SLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
+L+ G GIASYYWQPQ+VASGG FNPNA+TAAH++LPFGT+VRVTN NG++V VTINDRGPF+ GR+IDLS+ AA V+GM G+GLA VS+ V+GR
Sbjct: 101 TLSSGGGSHGIASYYWQPQKVASGGYFNPNALTAAHRSLPFGTKVRVTNKRNGKSVVVTINDRGPFIKGRIIDLSKRAAGVIGMQGAGLAPVSVEVVGR 199
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: UPI0009FB8073 (septal ring lytic transglycosylase RlpA family protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI0009FB8073) HSP 1 Score: 142 bits (359), Expect = 3.400e-40 Identity = 69/90 (76.67%), Postives = 79/90 (87.78%), Query Frame = 1
Query: 166 GIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
G+ASYYWQPQRVASGG FNPNAMTAAHKTLPFGTRVRVT+ NGR+V V INDRGP+V GR+IDLS+AAA V+GM G G+A+V + VLGR
Sbjct: 115 GVASYYWQPQRVASGGWFNPNAMTAAHKTLPFGTRVRVTHAGNGRSVVVKINDRGPYVRGRIIDLSKAAAGVIGMHGQGIAQVRMEVLGR 204
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Match: A0A7Y5CY75_HYPSQ (Endolytic peptidoglycan transglycosylase RlpA n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A7Y5CY75_HYPSQ) HSP 1 Score: 140 bits (354), Expect = 7.890e-40 Identity = 70/102 (68.63%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 130 ALASLTGGSAGSGIASYYWQPQRVASGGMFNPNAMTAAHKTLPFGTRVRVTNMNNGRAVTVTINDRGPFVAGRVIDLSRAAASVVGMTGSGLARVSLAVLGR 435
A S +GG +G ASYYWQPQ +ASGG FNPNAMTAAHKTLPFGT+VRVTN NNG++V VTINDRGP++AGR+IDLS+AAA + M GSG+ V++AVLG+
Sbjct: 71 ASQSNSGGYTLTGKASYYWQPQALASGGRFNPNAMTAAHKTLPFGTKVRVTNQNNGQSVVVTINDRGPYIAGRIIDLSKAAAHSINMQGSGVVPVTVAVLGK 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14534.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14534.2.1 >prot_P-wetherbeei_contig14534.2.1 ID=prot_P-wetherbeei_contig14534.2.1|Name=mRNA_P-wetherbeei_contig14534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=146bp GSDRVAPSSRAERRSTRNTRVTRERTVRSAEARQSRRGARRGPALASLTGback to top mRNA from alignment at P-wetherbeei_contig14534:551..988- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14534.2.1 ID=mRNA_P-wetherbeei_contig14534.2.1|Name=mRNA_P-wetherbeei_contig14534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig14534:551..988- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14534:551..988- >mRNA_P-wetherbeei_contig14534.2.1 ID=mRNA_P-wetherbeei_contig14534.2.1|Name=mRNA_P-wetherbeei_contig14534.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=438bp|location=Sequence derived from alignment at P-wetherbeei_contig14534:551..988- (Phaeothamnion wetherbeei SAG_119_79)back to top |