mRNA_P-wetherbeei_contig14494.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14494.1.1
Unique NamemRNA_P-wetherbeei_contig14494.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A6H5LET2_9PHAE (Acyltransf_C domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LET2_9PHAE)

HSP 1 Score: 111 bits (278), Expect = 1.040e-26
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSP-QFVGSVMAVLRLSVVPLALPFAMLMALPFVAGMACCALAWHAV 306
            ++H+RIK+YSLEEV+G+ HWLDDRW EKERLLA+F+ H SFPS GRGFPARR+LDT    QF  S  A +RLS V L +P   L+A+P    MA  AL +  V
Sbjct:  310 DIHVRIKRYSLEEVVGDTHWLDDRWAEKERLLAYFSRHRSFPSDGRGFPARRTLDTRGGGQFETSAAAFVRLSSVLLFVPLLSLVAIPLAVSMAVAALGYRVV 412
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: D7FLT9_ECTSI (1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLT9_ECTSI)

HSP 1 Score: 111 bits (278), Expect = 2.430e-26
Identity = 60/103 (58.25%), Postives = 74/103 (71.84%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSP-QFVGSVMAVLRLSVVPLALPFAMLMALPFVAGMACCALAWHAV 306
            ++H+RIK+YSLEEV+G+ HWLDDRW EKERLLA+F+ H SFPS GRGFPARR+LDT    QF  S  A +RLS V L +P   L+A+P    MA  AL +  V
Sbjct:  539 DIHVRIKRYSLEEVVGDTHWLDDRWAEKERLLAYFSRHRSFPSDGRGFPARRTLDTRGGGQFETSAAAFVRLSSVVLFVPLLSLVAIPLAVSMAVAALGYRLV 641
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S1D1D6_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1D6_CYCTE)

HSP 1 Score: 91.3 bits (225), Expect = 9.140e-21
Identity = 44/87 (50.57%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            E+H+RIKKYS+EEVL +A WLD +W EK+RLL+HF+ H SFP+  RGF   R  DT       SV+A+ RL +VP   P  +L ++P
Sbjct:   90 EIHIRIKKYSMEEVLQDASWLDKQWAEKDRLLSHFSRHQSFPADSRGFCRHREFDTRKFAMENSVVALCRLFIVPFTFPILILFSIP 176
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S2E9E4_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E9E4_TRICV)

HSP 1 Score: 87.8 bits (216), Expect = 2.070e-19
Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPAR-RSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            EVH+RI+++++EEVL +A WLD RW EK+RLL HFA HG FP+  RG+ +R R  +T +    GS+  + RL+++P A+P  +L A+P
Sbjct:   89 EVHLRIRRHTMEEVLNDARWLDGRWAEKDRLLGHFARHGRFPADPRGYGSRGRVYETRTHCIEGSIAGLCRLAMLPFAIPILLLFAVP 176
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S2DWG2_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DWG2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 8.830e-19
Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            EVH+RIK+YS EEV  +A WLD +W EK+RLL HFA H  FPS GRGF   R  DT +    GSV ++  L  +P  +PF +L+++P
Sbjct:  480 EVHLRIKRYSTEEVSQDARWLDKQWAEKDRLLGHFARHQQFPSDGRGFCRHRVFDTRTHSIEGSVFSLALLMFMPCTVPFMLLVSIP 566
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S4QH82_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QH82_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 7.640e-18
Identity = 42/87 (48.28%), Postives = 59/87 (67.82%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            EVH+RIK++S+EEVL +  WLD +W EK+RLL HFA H  FP  GRGF   R  DT +    GS+ ++  L  +P A+PF +L+++P
Sbjct:  396 EVHLRIKRFSVEEVLQDVGWLDKQWAEKDRLLGHFARHQQFPLDGRGFCRHREFDTRTHSIEGSIFSLGLLMWMPCAIPFLLLVSIP 482
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S1FRI0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FRI0_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 1.140e-17
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            EVH++IK+YS++EVL +  WLD +W EK+RLL+HFA H  FP+  RGF   R+ DT +     S +A++RL ++PL  PF  L+++P
Sbjct:  265 EVHLKIKRYSMDEVLNDPKWLDKKWAEKDRLLSHFARHQQFPADHRGFCRLRTFDTVTHGVETSFLALVRLGLLPLLAPFVALLSIP 351
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BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A1E7FJY7_9STRA (Acyltransf_C domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FJY7_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.340e-16
Identity = 36/89 (40.45%), Postives = 61/89 (68.54%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALPFV 267
            E+H+RIK+YS+EEVL ++ WLD +W EK+R+L +F+ H +FP+  RGF   +  DT       S+M+ +RL ++P +LP  + +++P +
Sbjct:  382 EIHIRIKRYSMEEVLQDSSWLDKKWAEKDRMLQYFSRHNNFPTDNRGFCRHQIFDTRYQSMETSIMSFMRLVLLPCSLPILLFLSIPII 470
[Close]
BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A1Z5JNC2_FISSO (Lysocardiolipin and lysophospholipid acyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JNC2_FISSO)

HSP 1 Score: 80.9 bits (198), Expect = 1.490e-15
Identity = 38/87 (43.68%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            EVH+RIK+YSLEEVL ++ W+D +W EK+RLL++F+ H SFP   RG+   R  DT       S++++ RL ++P  +P  +L+++P
Sbjct:  369 EVHIRIKRYSLEEVLQDSSWMDKKWAEKDRLLSYFSRHQSFPMDARGYRRPRIFDTRHHSIESSLVSLGRLLLLPCTVPILLLLSIP 455
[Close]
BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Match: A0A7S1UNY8_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1UNY8_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.580e-15
Identity = 35/87 (40.23%), Postives = 60/87 (68.97%), Query Frame = 1 
Query:    1 EVHMRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRSLDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALP 261
            +VH+RI++YS++EVL +++WLD +W EK+R+L+HFA +  FP   RGF   R  +T      GS++A+++L  +P  +P  +L++ P
Sbjct:  168 DVHIRIRRYSMDEVLADSNWLDKQWAEKDRILSHFARNQFFPEDSRGFCRHRLFETRFHLIEGSLLALVQLLTLPFCVPIILLLSFP 254
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14494.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6H5LET2_9PHAE1.040e-2658.25Acyltransf_C domain-containing protein (Fragment) ... [more]
D7FLT9_ECTSI2.430e-2658.251-acyl-sn-glycerol-3-phosphate acyltransferase n=1... [more]
A0A7S1D1D6_CYCTE9.140e-2150.57Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S2E9E4_TRICV2.070e-1947.73Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2DWG2_9STRA8.830e-1950.57Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4QH82_9STRA7.640e-1848.28Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]
A0A7S1FRI0_9STRA1.140e-1747.13Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A1E7FJY7_9STRA2.340e-1640.45Acyltransf_C domain-containing protein n=1 Tax=Fra... [more]
A0A1Z5JNC2_FISSO1.490e-1543.68Lysocardiolipin and lysophospholipid acyltransfera... [more]
A0A7S1UNY8_9STRA4.580e-1540.23Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14494contigP-wetherbeei_contig14494:158..484 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FLT9
Preferred nameLPGAT1
PFAMsAcyltransf_C,Acyltransferase
Model size327
Max annot lvl2759|Eukaryota
KEGG rclassRC00004,RC00037
KEGG koko:K13514,ko:K15176
KEGG ReactionR09036
KEGG Pathwayko00564,map00564
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0003841,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005811,GO:0006629,GO:0006644,GO:0006650,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008374,GO:0008610,GO:0008654,GO:0009058,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010565,GO:0012505,GO:0016020,GO:0016021,GO:0016411,GO:0016740,GO:0016746,GO:0016747,GO:0019216,GO:0019217,GO:0019222,GO:0019637,GO:0031224,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031984,GO:0036148,GO:0036149,GO:0042171,GO:0042175,GO:0042304,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045723,GO:0045834,GO:0045923,GO:0046471,GO:0046486,GO:0046488,GO:0046889,GO:0046890,GO:0047144,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0062012,GO:0062013,GO:0065007,GO:0071617,GO:0071704,GO:0080090,GO:0090407,GO:0098827,GO:1901576
Exons1
Evalue7.96e-26
EggNOG OGsCOG0204@1|root,KOG1505@2759|Eukaryota
Description1-acylglycerol-3-phosphate O-acyltransferase activity
Cds size318
COG categoryI
BRITEko00000,ko00001,ko01000,ko01004,ko03021
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186023.679185-UTR-P-wetherbeei_contig14494:157..1661683186023.679185-UTR-P-wetherbeei_contig14494:157..166Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14494 158..166 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186023.6905656-CDS-P-wetherbeei_contig14494:166..4841683186023.6905656-CDS-P-wetherbeei_contig14494:166..484Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14494 167..484 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14494.1.1prot_P-wetherbeei_contig14494.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14494 167..484 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14494.1.1

>prot_P-wetherbeei_contig14494.1.1 ID=prot_P-wetherbeei_contig14494.1.1|Name=mRNA_P-wetherbeei_contig14494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=106bp
MRIKKYSLEEVLGNAHWLDDRWVEKERLLAHFAAHGSFPSGGRGFPARRS
LDTHSPQFVGSVMAVLRLSVVPLALPFAMLMALPFVAGMACCALAWHAVS
HVFRSV
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mRNA from alignment at P-wetherbeei_contig14494:158..484+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14494.1.1 ID=mRNA_P-wetherbeei_contig14494.1.1|Name=mRNA_P-wetherbeei_contig14494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig14494:158..484+ (Phaeothamnion wetherbeei SAG_119_79)
GAGGTGCACATGCGCATCAAAAAGTACTCGCTGGAAGAAGTGCTGGGCAA
CGCGCACTGGCTGGACGATCGATGGGTGGAAAAGGAACGTCTCTTGGCGC
ACTTCGCGGCGCACGGCTCTTTCCCGTCGGGCGGCCGCGGCTTCCCCGCG
CGGCGGTCGCTGGACACGCACTCGCCGCAGTTCGTCGGCTCCGTGATGGC
CGTCCTGCGGCTGTCTGTGGTGCCATTGGCGCTGCCATTCGCCATGCTCA
TGGCGCTGCCCTTCGTTGCCGGGATGGCCTGCTGCGCGCTCGCATGGCAC
GCCGTCTCGCACGTCTTCCGCTCTGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14494:158..484+

>mRNA_P-wetherbeei_contig14494.1.1 ID=mRNA_P-wetherbeei_contig14494.1.1|Name=mRNA_P-wetherbeei_contig14494.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=318bp|location=Sequence derived from alignment at P-wetherbeei_contig14494:158..484+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCATCAAAAAGTACTCGCTGGAAGAAGTGCTGGGCAACGCGCACTG
GCTGGACGATCGATGGGTGGAAAAGGAACGTCTCTTGGCGCACTTCGCGG
CGCACGGCTCTTTCCCGTCGGGCGGCCGCGGCTTCCCCGCGCGGCGGTCG
CTGGACACGCACTCGCCGCAGTTCGTCGGCTCCGTGATGGCCGTCCTGCG
GCTGTCTGTGGTGCCATTGGCGCTGCCATTCGCCATGCTCATGGCGCTGC
CCTTCGTTGCCGGGATGGCCTGCTGCGCGCTCGCATGGCACGCCGTCTCG
CACGTCTTCCGCTCTGTC
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