mRNA_P-wetherbeei_contig14484.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A3C0TYP5_9PROT (NADH-quinone oxidoreductase subunit B n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYP5_9PROT) HSP 1 Score: 347 bits (891), Expect = 7.520e-121 Identity = 164/180 (91.11%), Postives = 176/180 (97.78%), Query Frame = 1
Query: 1 VEKGCAGMGVTPDSVDAGAGFGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
+E+G AGMG+TPD +++ + FG+LSDELSDKG+ILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+Y+PGCPP+AEALMYGILQLQRKIRREGTIAR
Sbjct: 1 MEEGRAGMGMTPDPLNSASSFGLLSDELSDKGFILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYIPGCPPSAEALMYGILQLQRKIRREGTIAR 180
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A3D3UHC6_9PROT (NADH-quinone oxidoreductase subunit B n=3 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UHC6_9PROT) HSP 1 Score: 319 bits (818), Expect = 9.120e-110 Identity = 155/177 (87.57%), Postives = 163/177 (92.09%), Query Frame = 1
Query: 22 MGVTPDSVDAG----AGFGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
MGV + G A FG LSDEL+DKGY+LTSLDDVITWARTGSLMWMTFGLACC VEMMQA+MPRYD+ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEALMYG+LQLQRKIRREGTIAR
Sbjct: 1 MGVDVKTATVGGPDDAFFGQLSDELADKGYLLTSLDDVITWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGTAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALMYGLLQLQRKIRREGTIAR 177
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A7Y1Z1H6_9HYPH (NADH-quinone oxidoreductase subunit B n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7Y1Z1H6_9HYPH) HSP 1 Score: 314 bits (804), Expect = 1.580e-107 Identity = 152/184 (82.61%), Postives = 168/184 (91.30%), Query Frame = 1
Query: 1 VEKGCAGMGVTPDSVD-AGAG---FGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
+E+G AG+G+T + AGAG +G +SDEL+DKG+I+TS D+VI WARTGSLMWMTFGLACC VEMMQA+MPRYD+ERFG APRASPRQSD+MIVAGTLTNKMAPA+RKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQRKIRR GTI R
Sbjct: 1 MEEGGAGVGLTDQAAPLAGAGDAFYGEISDELADKGFIVTSTDEVINWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGVAPRASPRQSDLMIVAGTLTNKMAPAMRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRRTGTIER 184
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A2P2EBL2_9PROT (NADH-quinone oxidoreductase subunit B n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2P2EBL2_9PROT) HSP 1 Score: 309 bits (792), Expect = 1.230e-105 Identity = 145/160 (90.62%), Postives = 153/160 (95.62%), Query Frame = 1
Query: 61 FGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
F LSDEL+DKG+++ + DD+ITWARTGSLMWMTFGLACC VEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMP PRYVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQ+KIRREGTI R
Sbjct: 29 FSGLSDELADKGFVVAAADDLITWARTGSLMWMTFGLACCAVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPNPRYVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQKKIRREGTIER 188
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A1M7S096_9RHOB (NADH-quinone oxidoreductase subunit B n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A1M7S096_9RHOB) HSP 1 Score: 306 bits (784), Expect = 1.770e-104 Identity = 151/185 (81.62%), Postives = 159/185 (85.95%), Query Frame = 1
Query: 22 MGVTPDSVDAGAGFGV------------LSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
MGVTP S + A V LSDEL+DKG++LTS +D+ITWARTGSL WMTFGLACC VEMMQ +MPRYD ERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YGILQLQRKIRR GTI R
Sbjct: 1 MGVTPQSASSAA-LSVAAGPDKEAMTRRLSDELADKGFLLTSAEDLITWARTGSLFWMTFGLACCAVEMMQTSMPRYDAERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQRKIRRTGTITR 184
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A1H1I2G2_9HYPH (NADH-quinone oxidoreductase subunit B n=7 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1H1I2G2_9HYPH) HSP 1 Score: 306 bits (784), Expect = 2.340e-104 Identity = 142/160 (88.75%), Postives = 154/160 (96.25%), Query Frame = 1
Query: 61 FGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
FG L+DEL+DKG+++T+ DD+ITWARTGSLMWMTFGLACC VEMMQA+MPRYD+ERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVP+DIYVPGCPPTAEAL+YGIL LQ+KIRR GTI R
Sbjct: 33 FGELNDELADKGFLVTATDDLITWARTGSLMWMTFGLACCAVEMMQASMPRYDVERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPIDIYVPGCPPTAEALLYGILLLQKKIRRTGTIER 192
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A8J7S9K8_9RHOB (NADH-quinone oxidoreductase subunit B n=1 Tax=Thermohalobaculum xanthum TaxID=2753746 RepID=A0A8J7S9K8_9RHOB) HSP 1 Score: 305 bits (781), Expect = 4.410e-104 Identity = 142/157 (90.45%), Postives = 152/157 (96.82%), Query Frame = 1
Query: 70 LSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
LS+EL+DKG+ILT++DDVI WARTGSLMWMTFGLACC VEMMQ AMPRYD+ERFG APRASPRQSD+MIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDR+VPVD+YVPGCPPTAEAL+YGILQLQRKIRR GTIAR
Sbjct: 24 LSNELADKGFILTTVDDVINWARTGSLMWMTFGLACCAVEMMQTAMPRYDLERFGVAPRASPRQSDLMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRVVPVDVYVPGCPPTAEALLYGILQLQRKIRRTGTIAR 180
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: UPI00035D926E (NADH-quinone oxidoreductase subunit B n=1 Tax=Neomegalonema perideroedes TaxID=217219 RepID=UPI00035D926E) HSP 1 Score: 304 bits (778), Expect = 1.030e-103 Identity = 143/158 (90.51%), Postives = 152/158 (96.20%), Query Frame = 1
Query: 67 VLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
+LSDEL+DKG+ILT+ DD+I WARTGSLMWMTFGLACC VEMMQA+MPRYDMERFG APRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDR+VPVDIYVPGCPPTAEAL+YGILQLQRKIRR +IAR
Sbjct: 17 LLSDELADKGFILTTADDLIAWARTGSLMWMTFGLACCAVEMMQASMPRYDMERFGAAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRVVPVDIYVPGCPPTAEALIYGILQLQRKIRRTSSIAR 174
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A101VS74_9PROT (NADH-quinone oxidoreductase subunit B n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A101VS74_9PROT) HSP 1 Score: 304 bits (779), Expect = 1.180e-103 Identity = 145/178 (81.46%), Postives = 159/178 (89.33%), Query Frame = 1
Query: 7 KGCAGMGVTPDSVDAGAGFGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
+G G V PD F +++EL+DKG+++T+ DD+I WARTGSLMWMTFGLACC VEMMQA+MPRYD+ERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEAL+YG+L LQRKIRR GTIAR
Sbjct: 16 EGAGGGDVRPDPY-----FTQINNELADKGFLVTTTDDLINWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGVLLLQRKIRRTGTIAR 188
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Match: A0A8J3G1Z1_9PROT (NADH-quinone oxidoreductase subunit B n=1 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3G1Z1_9PROT) HSP 1 Score: 304 bits (779), Expect = 1.180e-103 Identity = 142/161 (88.20%), Postives = 153/161 (95.03%), Query Frame = 1
Query: 58 GFGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLACCGVEMMQAAMPRYDMERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPEPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALMYGILQLQRKIRREGTIAR 540
GF LSD+L+DKG+I + DD+ITWARTGSLMWMTFGLACC VEMMQA+MPRYD+ERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMP PRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVD+YVPGCPPTAEAL+YGILQLQ+KIRREG+I R
Sbjct: 28 GFDGLSDQLADKGFITAASDDLITWARTGSLMWMTFGLACCAVEMMQASMPRYDLERFGFAPRASPRQSDVMIVAGTLTNKMAPALRKVYDQMPNPRYVISMGSCANGGGYYHYSYSVVRGCDRIVPVDVYVPGCPPTAEALIYGILQLQKKIRREGSIIR 188 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14484.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14484.2.1 >prot_P-wetherbeei_contig14484.2.1 ID=prot_P-wetherbeei_contig14484.2.1|Name=mRNA_P-wetherbeei_contig14484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=174bp MGVTPDSVDAGAGFGVLSDELSDKGYILTSLDDVITWARTGSLMWMTFGLback to top mRNA from alignment at P-wetherbeei_contig14484:890..1432- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14484.2.1 ID=mRNA_P-wetherbeei_contig14484.2.1|Name=mRNA_P-wetherbeei_contig14484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=543bp|location=Sequence derived from alignment at P-wetherbeei_contig14484:890..1432- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14484:890..1432- >mRNA_P-wetherbeei_contig14484.2.1 ID=mRNA_P-wetherbeei_contig14484.2.1|Name=mRNA_P-wetherbeei_contig14484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=522bp|location=Sequence derived from alignment at P-wetherbeei_contig14484:890..1432- (Phaeothamnion wetherbeei SAG_119_79)back to top |