mRNA_P-wetherbeei_contig14469.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A5Q2RHF1_9ACTN (Response regulator n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RHF1_9ACTN) HSP 1 Score: 229 bits (583), Expect = 2.400e-72 Identity = 116/227 (51.10%), Postives = 160/227 (70.48%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAI--GRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFDVP 675
+L+V+DEEA V L L REGF V+VA DGAEAL + + PDLVLLDVM+P++ G++VCRE+R + + PI+++T + E D V+GLEVGADDYVTKP+ REL+AR+RA LRR + PA+ G ++ + +D E HE PVSL +EF+LL LL+EN RVL RE L+DR+WG D+ G+ L V V RLR K+E +PS P ++T+RG+GY+++VP
Sbjct: 8 VLVVEDEEAFVEALTVGLKREGFRVQVARDGAEALALFDVVAPDLVLLDVMLPKVSGIDVCREIRTKS-KVPIIMVTAKAAEIDTVVGLEVGADDYVTKPYRLRELVARMRAVLRRTPLSEPAVLSGESMTVGDVTIDPEGHEVVVRGEPVSLPLKEFELLCLLIENAGRVLPRETLIDRVWGLDYVGDTKTLDVHVKRLRSKVEVDPSHPTRIVTIRGLGYKYEVP 233
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: UPI001A0024A7 (Response regulator transcription factor n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=UPI001A0024A7) HSP 1 Score: 228 bits (582), Expect = 3.190e-72 Identity = 114/228 (50.00%), Postives = 162/228 (71.05%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRR-----WQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFD 669
IL+V+D+ L+ GL+YSLTREG+ V A DG +AL A +PDL++LD+M+P +DGLEVCR LR G PIL+LT + EE D+V+GLE+GADDY+TKPF+ REL+AR+RA LRR W+ ++ A R LR L +DL RH+ +SLS +EF+LL L +N V++R+ L+++IWGY++EG+ + V + LR+KIE + + PR +LTVRGVGY+F+
Sbjct: 6 ILIVEDDRTLLEGLKYSLTREGYRVSTATDGVQALELAREEKPDLIILDIMLPELDGLEVCRILRKEGMAIPILMLTAKVEEIDRVVGLELGADDYITKPFSLRELLARIRASLRRVEMTQWEVSQQAPPR-LRFGDLEIDLPRHQVTLGDSVLSLSRKEFELLAFLAKNRGLVISRDTLLEKIWGYEYEGDTRTVDVHIRWLREKIESDSANPRRILTVRGVGYKFE 232
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A255ENG7_9ACTN (DNA-binding response regulator n=1 Tax=Parenemella sanctibonifatiensis TaxID=2016505 RepID=A0A255ENG7_9ACTN) HSP 1 Score: 227 bits (579), Expect = 7.030e-72 Identity = 116/223 (52.02%), Postives = 158/223 (70.85%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFD 669
+L+V+DE++ L Y L +EGF+V A DGA+ L++ +R DLVLLD+MMP + G EVCR+LR RG P++++T R E DKV+GLE+GADDYVTKPF+ REL AR+RA LRR Q I + A G+ +D+ERHE A PV L+ +EF+LL +L+ N RV+TR QL+DRIWG D+ G+ L V + RLR KIE PS PR+++TVRG+GY+F+
Sbjct: 4 VLVVEDEDSYREALTYMLEKEGFDVVAAPDGAQGLVEFDRGGADLVLLDLMMPGLSGTEVCRQLRQRG-SVPVIMVTARDSEVDKVVGLELGADDYVTKPFSQRELTARIRAVLRRAQDVE-LIPDVIEAGGVRMDVERHEVSVAGEPVRLALKEFELLEMLLRNSGRVMTRGQLIDRIWGADYVGDTKTLDVHIKRLRAKIEENPSRPRYLVTVRGLGYKFE 224
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A7V9GFS2_9ACTN (Response regulator transcription factor n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9GFS2_9ACTN) HSP 1 Score: 228 bits (581), Expect = 7.320e-72 Identity = 120/232 (51.72%), Postives = 162/232 (69.83%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPA-------IGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFDVP 675
IL+V+DE++ V L L REGF V+VA DGA+AL + ++PDLVLLDVM+PR+ G++VCRE+RA+ PI+++T +G E D V+GLEVGADDYVTKP+ REL+AR+RA LRR RPA G L + LD ERHE + VSL +EF+LL LL+EN RVLTRE L+DR+WG D+ G+ L V V RLR K+E +PS P ++T+RG+GY++++P
Sbjct: 8 ILVVEDEDSFVDALTVGLKREGFRVQVARDGAQALELFDVVKPDLVLLDVMLPRVSGIDVCREIRAKS-RVPIIMVTAKGSEIDTVVGLEVGADDYVTKPYRLRELVARIRAVLRR----RPAEDGNPLLSGEALEVGDVALDPERHEVRIRDEHVSLPLKEFELLGLLLENAGRVLTRETLIDRVWGPDYVGDTKTLDVHVKRLRAKVETDPSNPSRIVTIRGLGYKYELP 234
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A6N8YYT0_9CHLR (Response regulator transcription factor n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6N8YYT0_9CHLR) HSP 1 Score: 227 bits (578), Expect = 1.290e-71 Identity = 112/228 (49.12%), Postives = 158/228 (69.30%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIG-----RNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFD 669
+L+V+DEE L+ LRY+L REG++V A DG E L A ++ P L+LLD+M+P +DG E+CR LR R E PIL+LT +GEE D+V+GLE+GADDY+TKPF+ REL+ARVR LRR + + G + R L +DL HEA+ A P+SL +EFDLL LL N R TR+Q+++++WGYD+ G+ + V + LR+K++ +PS R ++T+RGVGYR D
Sbjct: 6 VLVVEDEENLLEALRYNLEREGYQVHTASDGGEGLEMARKLNPSLILLDIMLPTLDGFEICRILR-RESEVPILMLTAKGEEVDRVVGLELGADDYITKPFSIRELVARVRNTLRRTKYLKDDQGVAGERPSHRIGALEIDLNSHEARLAGRPLSLKPKEFDLLALLASNKGRAFTRDQILEKVWGYDYIGQTRTVDVYISWLREKLQADPSTARCIVTIRGVGYRLD 232
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A1R4I784_9ACTN (Phosphate regulon transcriptional regulatory protein PhoB (SphR) n=2 Tax=Luteococcus japonicus TaxID=33984 RepID=A0A1R4I784_9ACTN) HSP 1 Score: 226 bits (577), Expect = 1.410e-71 Identity = 117/223 (52.47%), Postives = 157/223 (70.40%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFD 669
+L+V+DEE+ Y L +EGFEV A DGA+ L + ER+ DLVLLD+MMP + G EVCR+LR R PI+++T R E DKV+GLE+GADDYVTKPF+ REL+AR+RA LRR Q + + + A G+ +D+ERHE P+ L+ +EF+LL LL+ N RV+TR QL+DRIWG D+ G+ L V V RLR KIER+PS P ++TVRG+GY+F+
Sbjct: 4 VLIVEDEESYREATGYMLRKEGFEVSEAPDGAKGLAEFERVGADLVLLDLMMPGMPGTEVCRQLRTRS-NVPIIMVTARDAEIDKVVGLELGADDYVTKPFSHRELVARIRAVLRRGQD-QELVPELIEAGGVRMDVERHEVTVDGEPIRLALKEFELLELLLRNSGRVMTRGQLIDRIWGADYVGDTKTLDVHVKRLRAKIERDPSSPTLLVTVRGLGYKFE 224
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A7V9B3Q1_9ACTN (Response regulator transcription factor n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7V9B3Q1_9ACTN) HSP 1 Score: 227 bits (579), Expect = 1.520e-71 Identity = 117/228 (51.32%), Postives = 158/228 (69.30%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRW---QKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFDVP 675
IL+V+DE++ V L L REGF V++A DGA+AL + ++PDLVLLDVM+P I G++VCRELRAR + PI+++T +G E D V+GLEVGADDYVTKP+ REL+AR+RA LRR RP G + + +D ERHE V L +EF+LL LL+EN RVLTRE L+DR+WG D+ G+ L V V RLR K+E +PS P ++T+RG+GY+++ P
Sbjct: 9 ILVVEDEDSFVEALTVGLKREGFRVQIARDGAQALEIFDAVKPDLVLLDVMLPVISGIDVCRELRARS-KVPIIMVTAKGSEIDTVVGLEVGADDYVTKPYRLRELVARIRAVLRRRPLEDTARPLSGEAIEVGDVSIDPERHEVMIRGEQVQLPLKEFELLTLLLENAGRVLTRETLIDRVWGPDYVGDTKTLDVHVKRLRGKVETDPSSPTRIVTIRGLGYKYERP 235
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A7C6KJ28_9FIRM (Response regulator transcription factor n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A7C6KJ28_9FIRM) HSP 1 Score: 226 bits (577), Expect = 1.710e-71 Identity = 120/222 (54.05%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRF 666
+L+VDDE ++V +R++L REGF A DG EAL + E PDLVLLD+M+PR+ GL+VCR LR R PI++LT RGEETDKV+GLE+GADDYVTKPF+ REL+ARVRA LRR G LR + LD +R+E + L+ +EFDLL +LM N VL+R+ L+ ++WGYDF G+ + V V RLR KIE +PS PR + TVRGVGYRF
Sbjct: 6 VLVVDDEPSIVELVRFTLEREGFTTGAAADGEEALRKVEADHPDLVLLDLMLPRMSGLDVCRILRQRYPALPIIILTARGEETDKVLGLELGADDYVTKPFSPRELVARVRAVLRRTVPVGEESG-VLRIGPVTLDPQRYEVTVNGRKIELAPKEFDLLRMLMANKGVVLSRDVLLQKVWGYDFAGDTRTIDVHVVRLRQKIEEDPSQPRLIETVRGVGYRF 226
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A7C1KBZ8_9CHLR (Response regulator transcription factor n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1KBZ8_9CHLR) HSP 1 Score: 226 bits (577), Expect = 1.770e-71 Identity = 119/225 (52.89%), Postives = 154/225 (68.44%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFDVP 675
IL+VDDE +V +RY+L REGF+V AGDG EAL Q PDLV+LD+M+P +DG EVCR++R R PIL+LT RG E D+V G E+GADDYVTKPF+ REL+ARVRA LRR + L+A+GL LD E PV L+A+EFDLL LLM + RV TR+ L++ IWG+D+ G + + + RLR+KIE +P+ P F+ TVRGVGY+F P
Sbjct: 4 ILIVDDEPHIVELVRYNLEREGFDVLTAGDGREALRQVREGAPDLVILDLMLPEVDGFEVCRQIR-RTSAVPILMLTARGRELDRVAGFELGADDYVTKPFSPRELVARVRAILRRAGRELLEAQAPLQADGLHLDPATREVFLHGRPVELTAKEFDLLALLMRHPNRVFTRDFLLEHIWGHDYFGSTRTVDMHISRLREKIEDDPAAPTFIQTVRGVGYKFKAP 227
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Match: A0A8J7GIN1_9ACTN (Two-component system response regulator RegX3 n=3 Tax=Longispora TaxID=203522 RepID=A0A8J7GIN1_9ACTN) HSP 1 Score: 226 bits (576), Expect = 2.070e-71 Identity = 112/223 (50.22%), Postives = 155/223 (69.51%), Query Frame = 1
Query: 1 ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVMMPRIDGLEVCRELRARGFEAPILLLTCRGEETDKVIGLEVGADDYVTKPFATRELIARVRAHLRRWQKTRPAIGRNLRAEGLMLDLERHEAQTAQGPVSLSAREFDLLHLLMENWPRVLTREQLMDRIWGYDFEGEANVLQVAVGRLRDKIEREPSLPRFVLTVRGVGYRFD 669
+L+V+DEE+ L Y L +EGFEV VA G A+++ +R D+VLLD+M+P + G EVCR+LR R PI+++T R E DKV+GLE+GADDYVTKP++ REL+AR+RA LRR + + L A + +D++RH + G V L +EF+LL LL+ N RVLTR QL+DR+WG D+ G+ L V V RLR KIE EPS PR+++TVRG+GY+F+
Sbjct: 4 VLVVEDEESFSDALSYMLRKEGFEVSVAATGTAAIVEFDRAGADIVLLDLMLPEMSGSEVCRQLRTRS-NVPIIMVTARDSEIDKVVGLEIGADDYVTKPYSPRELVARIRAVLRRQIEPAELLPGTLEAGPVRMDVDRHTVSVSGGTVQLPLKEFELLELLLRNAGRVLTRGQLIDRVWGADYVGDTKTLDVHVKRLRSKIEPEPSTPRYIVTVRGLGYKFE 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14469.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14469.1.1 >prot_P-wetherbeei_contig14469.1.1 ID=prot_P-wetherbeei_contig14469.1.1|Name=mRNA_P-wetherbeei_contig14469.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp ILLVDDEEALVAGLRYSLTREGFEVEVAGDGAEALLQAERIRPDLVLLDVback to top mRNA from alignment at P-wetherbeei_contig14469:16..705+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14469.1.1 ID=mRNA_P-wetherbeei_contig14469.1.1|Name=mRNA_P-wetherbeei_contig14469.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig14469:16..705+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14469:16..705+ >mRNA_P-wetherbeei_contig14469.1.1 ID=mRNA_P-wetherbeei_contig14469.1.1|Name=mRNA_P-wetherbeei_contig14469.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig14469:16..705+ (Phaeothamnion wetherbeei SAG_119_79)back to top |