mRNA_P-wetherbeei_contig1445.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A835YLC8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLC8_9STRA) HSP 1 Score: 152 bits (385), Expect = 4.270e-39 Identity = 112/311 (36.01%), Postives = 152/311 (48.87%), Query Frame = 1
Query: 16 LAMVPSLQGLVSFLPGVHDGVRAAGPVALARPGAPALLERESRIRSWIPVALEQRFRRVRIQLMSLQAEALHGFDLDVGARRLLNAPVPPSERDFLINGWRWHSRGVIRDVARLGTVAAATLDAATDAVATATRQQRNRGKANAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLDGARRLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQIRTLGARLGQACAATDGP--RGATALLRAVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRRFNTKVRSSCSL 942
L MVPS QG G+ G AA V PG+ W A Q ++R+ +MS EA DLDV ++R APV P +R+FLINGWRWH+R IR+ RL VAA A ++A ++Q RL + YD+ W+F + KL ++E ELFFPWLR+ LP E VL+ +E++R+Q+R +GARLG A + P G A VDL+ EL+++ SL R QE Y++PYVAAYV Q +FN+KV +S L
Sbjct: 18 LVMVPSFQGF-----GL--GAPAASVVKGKAPGSSG---------GWRQRARGQ-LDKLRVHVMSYSEEA----DLDVHSQRFQAAPVAPEDREFLINGWRWHTRVAIREAGRLRDVAAG-------ARSSAAKEQM---------------------------------------------PARLGKCYDYVWSFVFVKLHKIEMELFFPWLRQNLPMEVAVVLEEYERERRQLREIGARLGTAVKDLNRPGKAGQAAYKAVVDLTGELERKTLSLQRGQEGYLMPYVAAYVDRATQNKFNSKVIASLGL 255
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A6H5K121_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K121_9PHAE) HSP 1 Score: 129 bits (325), Expect = 5.130e-30 Identity = 91/272 (33.46%), Postives = 125/272 (45.96%), Query Frame = 1
Query: 151 SWIPVALEQRFRRVRIQLMSLQAEALHGFDLDVGARRLLNAPVPPSERDFLINGWRWHSRGVIRDVARLGTVAAATLDAATDAVATATRQQRNRGKANAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLDGARRLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQIRTLGARLGQACAATD--------GPRGATALLRAVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRRFNTKVRSSCSL 942
SW+ + RRV++Q+MS+ D + A+ +APVP ER F +NGWRWHSR V+RD+AR A +A A +KG R+ + Y F WTFS +KL E+ LFFPWLR+ +P E P L F+++R + +G ++GQ A + PR A LLR +L+ EL+ + A L R QEA I+P AAY T K Q +FN KV S L
Sbjct: 96 SWLKERVRDGKRRVQMQVMSMVP------DTSMDAKCFDDAPVPLDERGFHVNGWRWHSRAVLRDIARFRRAALQAAEATGGA------------DGGGEKGAA--------------------------------AVERVAKCYGFMWTFSVTKLHNTETSLFFPWLRDLVPKEVLPPLSEFDRERAGVVRIGEKIGQFVAEAERASASKSSSPRAA--LLRCAELAEELEAKAARLARVQEAAIVPVTAAYTTSKQQWKFNDKVIFSLGL 315
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A7S1TYY3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TYY3_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.680e-29 Identity = 86/244 (35.25%), Postives = 119/244 (48.77%), Query Frame = 1
Query: 241 LDVGARRLL-------NAPVPPSERDFLINGWRWHSRGVIRDVARLGTVAAATLDAATDAVATATRQQRNRGKANAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLDGARRLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQIRTLGARLGQAC------AATDGPRGATALLRAVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRRFNTKVRSS 933
L+ ARR + +APV ER FLI+GWRWHSR V RD RL A +++ K A + +L+ RL++ YDF W FS+++L +E +L+FPWLR+ LP P LD FE++R++I T+G +LG A G GA AL R L+++L++RV L QEA +P V+AYV+ QRRFN KV SS
Sbjct: 71 LEESARRYIGFGDAMASAPVSLMERTFLIHGWRWHSRSVARDANRLQAAA---------------KEEERAWKKGADQA------------------------------DLVASFERLEQGYDFLWNFSFTQLRAIEMDLYFPWLRKNLPRSVHPQLDAFERERREIETVGRKLGDEIGNGAKRANGRGDAGA-ALARVSSLASDLERRVLELTTTQEACFVPLVSAYVSAAEQRRFNFKVISS 268
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A4D9CW14_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CW14_9STRA) HSP 1 Score: 124 bits (310), Expect = 1.090e-28 Identity = 78/243 (32.10%), Postives = 120/243 (49.38%), Query Frame = 1
Query: 274 PVPPSERDFLINGWRWHSRGVIRDVARLGTVAAATLDAATDAVATATRQQRNRGKANAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLDGARRLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQIRTLGARLGQACAATDGPRG----------------ATALLR---AVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRRFNTKVRSSCSLF 945
PVPPS RDFLINGWRWHSR V+RDV R VAT RQ+ RG ++G+ RL YDF W+FS+ L+++E+++F+P+LR+ LP++ P+L E+ +++ TLG RLGQ P ++ L R A+ L+ +++ +V ++ Q++ ++P VAAY++ K Q++FN KV SS +F
Sbjct: 44 PVPPSNRDFLINGWRWHSRSVLRDVRRF------------QEVATRERQEVLRG---------------------------------------VEGSSRLPACYDFFWSFSWVALLKIENQIFYPFLRKTLPSDLRPLLQDLERQGEEVTTLGLRLGQVVGRFRDPSSPPXXXXXXXXXSSLPSSSRLARLDEALSLAGKMEVKVKGMIDTQDSMLVPVVAAYLSQKEQKKFNNKVISSLGIF 235
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A7S1U169_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U169_9STRA) HSP 1 Score: 106 bits (265), Expect = 5.630e-23 Identity = 58/128 (45.31%), Postives = 81/128 (63.28%), Query Frame = 1
Query: 568 RLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQIRTLGARLGQAC------AATDGPRGATALLRAVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRRFNTKVRSS 933
RL++ YDF W FS+++L +E +L+FPWLR+ LP P LD FE++R++I T+G +LG A G GA AL R L+++L++RV L QEA +P V+AYV+ QRRFN KV SS
Sbjct: 40 RLEQGYDFLWNFSFTQLRAIEMDLYFPWLRKNLPRSVHPQLDAFERERREIETVGRKLGDEIGNGAKRANGRGDAGA-ALARVSSLASDLERRVLELTTTQEACFVPLVSAYVSAAEQRRFNFKVISS 166
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: K8YU62_NANGC (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YU62_NANGC) HSP 1 Score: 89.4 bits (220), Expect = 6.440e-16 Identity = 51/152 (33.55%), Postives = 75/152 (49.34%), Query Frame = 1
Query: 265 LNAPVPPSERDFLINGWRWHSRGVIRDVARLGTVAAATLDAATDAVATATRQQRNRGKANAKKGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELLDGARRLQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGPVLDGFEQDRQQI 720
L PVPPS+RDFLINGWRWHSR V+RDV R VAT RQ+ RG ++G+ RL YDF W+FS+ L+++E+++F+P+LR+ LP++ P+L E+ +++
Sbjct: 72 LLGPVPPSDRDFLINGWRWHSRSVLRDVRRF------------QEVATRERQEVLRG---------------------------------------VEGSSRLPACYDFFWSFSWVALLKIENQIFYPFLRKTLPSDLRPLLQDLERQGEEV 172
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Match: A0A7S2R7T1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R7T1_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.470e-7 Identity = 41/126 (32.54%), Postives = 63/126 (50.00%), Query Frame = 1
Query: 571 LQRAYDFAWTFSYSKLMRVESELFFPWLREQLPAETGP--------VLDGFEQDRQQIRTLGARLGQACAATDGPRGA-----TALLRAVDLSAELQQRVASLVRAQEAYILPYVAAYVTPKAQRR 909
LQ+A F+Y L+RVESELF PWLRE+L E P +L E +R + + + + P + +A LSA+L RV S++ Q+ +I+P VA YV P+ +++
Sbjct: 3 LQKAVSHVLDFNYKGLLRVESELFLPWLREKLSFEPRPSVNRAFQNMLQKLESERSLVADIAQAMRKEVEIVINPDESMQAYLSATKNVAQLSADLSSRVRSIMEQQDIFIVPAVA-YVVPEKEQQ 127 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1445.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1445.2.1 >prot_P-wetherbeei_contig1445.2.1 ID=prot_P-wetherbeei_contig1445.2.1|Name=mRNA_P-wetherbeei_contig1445.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=443bp MAVLLLAMVPSLQGLVSFLPGVHDGVRAAGPVALARPGAPALLERESRIRback to top mRNA from alignment at P-wetherbeei_contig1445:3430..5537+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1445.2.1 ID=mRNA_P-wetherbeei_contig1445.2.1|Name=mRNA_P-wetherbeei_contig1445.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2108bp|location=Sequence derived from alignment at P-wetherbeei_contig1445:3430..5537+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1445:3430..5537+ >mRNA_P-wetherbeei_contig1445.2.1 ID=mRNA_P-wetherbeei_contig1445.2.1|Name=mRNA_P-wetherbeei_contig1445.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1329bp|location=Sequence derived from alignment at P-wetherbeei_contig1445:3430..5537+ (Phaeothamnion wetherbeei SAG_119_79)back to top |