mRNA_P-wetherbeei_contig14413.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14413.1.1
Unique NamemRNA_P-wetherbeei_contig14413.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A8H4L2A0_9HYPO (Fungal specific transcription factor domain-containing n=1 Tax=Fusarium albosuccineum TaxID=1237068 RepID=A0A8H4L2A0_9HYPO)

HSP 1 Score: 53.1 bits (126), Expect = 6.670e-7
Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1 
Query:    1 RPDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGRGRP 135
            RP ++ R+C++CRR KVKCDK+ PC  CVR    CV    GR RP
Sbjct:   50 RPFLSQRSCVTCRRRKVKCDKSVPCANCVRRGAACVFPPPGRARP 94
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: R0INE0_SETT2 (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Setosphaeria turcica (strain 28A) TaxID=671987 RepID=R0INE0_SETT2)

HSP 1 Score: 51.6 bits (122), Expect = 2.340e-6
Identity = 22/41 (53.66%), Postives = 28/41 (68.29%), Query Frame = 1 
Query:    4 PDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            P  A R+C++CRR KVKCDK  PC+ CVR K+ C+    GR
Sbjct:   31 PTPAPRSCVTCRRRKVKCDKNNPCSNCVRAKIECIFPGPGR 71
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A6A5SDP2_9PLEO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Clathrospora elynae TaxID=706981 RepID=A0A6A5SDP2_9PLEO)

HSP 1 Score: 51.2 bits (121), Expect = 3.200e-6
Identity = 21/41 (51.22%), Postives = 28/41 (68.29%), Query Frame = 1 
Query:    4 PDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            P    R+C++CRR KVKCDK +PC+ CVR K+ C+    GR
Sbjct:   25 PTTNPRSCVTCRRRKVKCDKKHPCSNCVRAKIECIFPGPGR 65
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A6A6GG97_9PEZI (Fungal-specific transcription factor domain-containing protein n=2 Tax=Elsinoe TaxID=40996 RepID=A0A6A6GG97_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:   19 RTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            R+C++CRR KVKCDK++PC  CVR  + CV  T GR
Sbjct:   81 RSCVTCRRRKVKCDKSHPCANCVRAHIDCVFPTPGR 116
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A2K1QKZ4_9PEZI (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1QKZ4_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:   19 RTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            R+C++CRR KVKCDK++PC  CVR  + CV  T GR
Sbjct:   77 RSCVTCRRRKVKCDKSHPCANCVRAHIECVFPTPGR 112
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A2P8AIJ1_9PEZI (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Elsinoe australis TaxID=40998 RepID=A0A2P8AIJ1_9PEZI)

HSP 1 Score: 50.4 bits (119), Expect = 5.980e-6
Identity = 21/36 (58.33%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:   19 RTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            R+C++CRR KVKCDK++PC  CVR  + CV  T GR
Sbjct:   80 RSCVTCRRRKVKCDKSHPCANCVRAHIDCVFPTPGR 115
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A2B7XN09_9EURO (C6 finger domain transcription factor nscR n=1 Tax=Polytolypa hystricis UAMH7299 TaxID=1447883 RepID=A0A2B7XN09_9EURO)

HSP 1 Score: 50.1 bits (118), Expect = 8.180e-6
Identity = 20/36 (55.56%), Postives = 27/36 (75.00%), Query Frame = 1 
Query:   19 RTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            R+CI+CRR KV+CDK +PC+ CVR K+ C+    GR
Sbjct:   60 RSCITCRRRKVRCDKRHPCSNCVRAKIDCIFPAPGR 95
[Close]
BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A2V1D5K8_9PLEO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Periconia macrospinosa TaxID=97972 RepID=A0A2V1D5K8_9PLEO)

HSP 1 Score: 49.7 bits (117), Expect = 1.120e-5
Identity = 20/41 (48.78%), Postives = 28/41 (68.29%), Query Frame = 1 
Query:    4 PDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            P++  R+C++CRR KVKCDK  PC+ C R K+ C+    GR
Sbjct:   30 PNLNPRSCVTCRRRKVKCDKKQPCSNCARAKIDCIFPGPGR 70
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BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: M2SP10_COCSN (Zn(2)-C6 fungal-type domain-containing protein n=5 Tax=Bipolaris TaxID=33194 RepID=M2SP10_COCSN)

HSP 1 Score: 49.7 bits (117), Expect = 1.120e-5
Identity = 23/41 (56.10%), Postives = 27/41 (65.85%), Query Frame = 1 
Query:    4 PDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGR 126
            P    R+CI+CRR KVKCDK  PC+ CVR K+ CV    GR
Sbjct:   35 PTPNPRSCITCRRRKVKCDKKNPCSHCVRAKIDCVFPGPGR 75
[Close]
BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Match: A0A6V8HH37_9EURO (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Talaromyces cellulolyticus TaxID=1472165 RepID=A0A6V8HH37_9EURO)

HSP 1 Score: 49.7 bits (117), Expect = 1.120e-5
Identity = 18/32 (56.25%), Postives = 24/32 (75.00%), Query Frame = 1 
Query:   10 VAGRTCISCRRSKVKCDKTYPCNRCVRLKLTC 105
             AGR+C+ CRR K+KCD+ YPC+ CV+ K  C
Sbjct:    8 AAGRSCLECRRRKIKCDRAYPCSYCVKTKTNC 39
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14413.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8H4L2A0_9HYPO6.670e-753.33Fungal specific transcription factor domain-contai... [more]
R0INE0_SETT22.340e-653.66Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6A5SDP2_9PLEO3.200e-651.22Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A6A6GG97_9PEZI5.980e-658.33Fungal-specific transcription factor domain-contai... [more]
A0A2K1QKZ4_9PEZI5.980e-658.33Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A2P8AIJ1_9PEZI5.980e-658.33Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A2B7XN09_9EURO8.180e-655.56C6 finger domain transcription factor nscR n=1 Tax... [more]
A0A2V1D5K8_9PLEO1.120e-548.78Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
M2SP10_COCSN1.120e-556.10Zn(2)-C6 fungal-type domain-containing protein n=5... [more]
A0A6V8HH37_9EURO1.120e-556.25Zn(2)-C6 fungal-type domain-containing protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14413contigP-wetherbeei_contig14413:1297..1714 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog93612.XP_008024865.1
PFAMsFungal_trans,Zn_clus
Model size135
Max annot lvl4751|Fungi
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Evalue3.83e-07
EggNOG OGs2ED2G@1|root,2SIT3@2759|Eukaryota,38EB4@33154|Opisthokonta,3NZWG@4751|Fungi,3QPVZ@4890|Ascomycota,1ZZGP@147541|Dothideomycetes,4KD3I@92860|Pleosporales
DescriptionFungal specific transcription factor domain
Cds size135
COG categoryK
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186021.0467334-CDS-P-wetherbeei_contig14413:1296..13831683186021.0467334-CDS-P-wetherbeei_contig14413:1296..1383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14413 1297..1383 -
1683186021.0596983-CDS-P-wetherbeei_contig14413:1666..17141683186021.0596983-CDS-P-wetherbeei_contig14413:1666..1714Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14413 1667..1714 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14413.1.1prot_P-wetherbeei_contig14413.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14413 1297..1714 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14413.1.1

>prot_P-wetherbeei_contig14413.1.1 ID=prot_P-wetherbeei_contig14413.1.1|Name=mRNA_P-wetherbeei_contig14413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=45bp
RPDVAGRTCISCRRSKVKCDKTYPCNRCVRLKLTCVAQTRGRGRP
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mRNA from alignment at P-wetherbeei_contig14413:1297..1714-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14413.1.1 ID=mRNA_P-wetherbeei_contig14413.1.1|Name=mRNA_P-wetherbeei_contig14413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=418bp|location=Sequence derived from alignment at P-wetherbeei_contig14413:1297..1714- (Phaeothamnion wetherbeei SAG_119_79)
CGGCCAGACGTCGCAGGCCGCACCTGCATCAGCTGCCGCCGCTCAAAGGT
CAGGTTGCGTATATCTGTGTCTTTGCGCCATACATTGTTCTTCTGTTTTC
CACATCTTTTATAAATACACAACGTGCATGCCTTTCAACTGTGATTTCGT
GTACAGACAGTGCCCTCCAAGAGATGGGGAAACCGAAGCCAAGCCGAGCT
TGCAGGCCATGCGCGGTGTTCTAAAGGTTAAAGGTCATTCGTAGTCGTGT
GACTTCTCGGTACTATGAAAAAGTAGAGTTGTGTTGAGAGTGCCCTCACC
CCACGACGCCACCGCACTCTGTGCCTCTCAGGTAAAATGCGACAAGACGT
ATCCCTGCAACCGCTGCGTGCGCCTCAAGCTGACCTGCGTGGCGCAGACT
CGCGGGCGGGGCCGGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14413:1297..1714-

>mRNA_P-wetherbeei_contig14413.1.1 ID=mRNA_P-wetherbeei_contig14413.1.1|Name=mRNA_P-wetherbeei_contig14413.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=135bp|location=Sequence derived from alignment at P-wetherbeei_contig14413:1297..1714- (Phaeothamnion wetherbeei SAG_119_79)
CGGCCAGACGTCGCAGGCCGCACCTGCATCAGCTGCCGCCGCTCAAAGGT
AAAATGCGACAAGACGTATCCCTGCAACCGCTGCGTGCGCCTCAAGCTGA
CCTGCGTGGCGCAGACTCGCGGGCGGGGCCGGCCG
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