mRNA_P-wetherbeei_contig1440.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A835YIR1_9STRA (SET domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIR1_9STRA) HSP 1 Score: 236 bits (603), Expect = 9.040e-70 Identity = 128/256 (50.00%), Postives = 161/256 (62.89%), Query Frame = 1
Query: 1 PGAICLWARARDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGF 768
PG +CLW+ RDG VGGLQGQT+L W+ AGDLR PV D A GLTWDVRLALAL +ATAD GG FW Y R LP PH VTVPLC P ALL+E+ + +A RA+ Q+ RL LFPL+ + + HP TA Y+ ++P ALQWAFALVRSRAF+AG ++FAFVPFLD ANH+ P A+F +D+A ++LT L + A ++ ISYG++LD+ +L TQYGF
Sbjct: 14 PGNLCLWSN-RDGVVGGLQGQTDLCWDQAGDLRDPVDDTSYAKGLTWDVRLALALQDATADIAVGGQFWDLYGRLLPAPHEVTVPLCLPSALLKEMQHAQLARRAQAQKDRLSGLFPLMMQTHMAHPRTACYSALGPGVLQ-------------------------SLPFALQWAFALVRSRAFSAGN----DQFAFVPFLDMANHNSNPNANFTFDSAIGSFKLTALTDVKADSQVYISYGQALDDGKLATQYGF 239
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A7S4D535_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D535_HETAK) HSP 1 Score: 195 bits (496), Expect = 6.440e-53 Identity = 115/272 (42.28%), Postives = 145/272 (53.31%), Query Frame = 1
Query: 1 PGAICLWARARDGAVG-GLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGFVLPGNPVAAVLSGFE 813
PG +C+WA RDG + GL GQ+++ W AGDLR D A GLTWD+RLA+AL EA ++ G FW Y LP PHTVT+PLCFP L E+ N M A QQQ RL +P L HP Y +++P AL W FALVRSR F+A E FAFVPFLD NH +P AD+ Y+ A D + L L P+ +G E ISYG+ L N+ LM +YGFV+ GNP A+ L ++
Sbjct: 121 PGRLCIWAN-RDGTIDRGLDGQSDMTWAVAGDLRADYPDLLRAQGLTWDLRLAVALLEAASEQRCAGGFWDVYGFMLPAPHTVTMPLCFPQELTAEVQNPFMMKAAGQQQVRLESHYPTLVKPNY-HPKLKIYQDLGMT---------------------------SSVPNALMWCFALVRSRCFSASP----ERFAFVPFLDMCNHWVKPNADYSYNEATDSFDLVALKPIRSGDEILISYGQGLSNDDLMVRYGFVIEGNPHASALMNYK 359
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: D7FNM5_ECTSI (SET domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNM5_ECTSI) HSP 1 Score: 184 bits (467), Expect = 2.640e-49 Identity = 139/353 (39.38%), Postives = 177/353 (50.14%), Query Frame = 1
Query: 133 LTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHS-PRPAADFGYDAAADE----WRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGFVLPGN-PVAAVLSGFESPPARPPLVAS-----SSGAAGATVANA------------------------------ASGERDGGVGDLRNELFARAQEFIASAGGGGSGRGADQQQYEQLARRAVPLIPVLAAQIAAL 1068
+TWDVRLALAL EAT+DP GG FW Y R LP PHTVTVP C P LL +LHN MA RA +Q +R+R L+P L +LL HP TA YAT A+P AL WAFA+VRSRAFAA + FAFVPFLD ANH PAA+F Y + + ++L + + AG E TISYG+ L+ +LM QYGF P N P+ L G ++ VA+ ++GAA AT + ER G L NELF RAQ+ A GG D++++E R+ +PL+P +A +I L
Sbjct: 1 MTWDVRLALALLEATSDPQVGGKFWHVYGRLLPQPHTVTVPFCLPERLLGQLHNSGMAERARKQVERVRSLYPDLMRTLLSHPKTAVYATRKTAEGEAAAAAGETATAAATKEAAEKETD--AVPMALLWAFAMVRSRAFAADG----DRFAFVPFLDMANHGFADPAANFTYISGGESQPGVFQLQAMRNISAGEEVTISYGEQLNAEQLMVQYGFPAPPNVPLELPLCGSDALVRDTVAVATEEVKETAGAATATAXXXXXVXXXXXXXXXXXXXXXXXXXXRGSRGALSEAERVG----LMNELFLRAQQRFAREAGG------DERRFEIGVRKVLPLVPPIATKIGEL 337
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: R1CZ63_EMIHU (SET domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1CZ63_EMIHU) HSP 1 Score: 167 bits (423), Expect = 5.830e-43 Identity = 108/249 (43.37%), Postives = 129/249 (51.81%), Query Frame = 1
Query: 31 RDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLF-PLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGFVL 774
R GA+GGL GQT+L+W+AAGDLR V + G TWDVRLALA+ EATA GG W YRRFLPLPH ++ P+C P LL EL +A A + + L L+ PL+ HPATA Y +P L WA+ALV SR FA SG + F FVPFLD HS P+A+F D L TL P+ AG E TISYG + R QYGFVL
Sbjct: 105 RSGAIGGLAGQTDLVWDAAGDLREEVGEAMFKRGATWDVRLALAVLEATAG--CGGELWDAYRRFLPLPHELSSPVCLPAELLAELREPAVASAAAARNELLADLYAPLMAHE--AHPATAGYVARGGEAAR------------------------GLVPAPLSWAYALVSSRCFAL---SGGDTFGFVPFLDMCQHSAVPSANFTSDERGIV--LRTLRPVAAGEEVTISYGGDYSSRRTFEQYGFVL 320
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A0M0JQY2_9EUKA (Ribulose-bisphosphate carboxylase oxygenase large subunit n-chloroplast n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JQY2_9EUKA) HSP 1 Score: 158 bits (400), Expect = 1.940e-39 Identity = 106/257 (41.25%), Postives = 136/257 (52.92%), Query Frame = 1
Query: 1 PGAICLWARARDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGFV 771
P ++ L A R G +GGLQGQTE++WEAAGDLR V +E G TWDVRLALA++EATA G FW YR+ +P P ++T PLC P A+L EL N ++ + + ++ + L P L + HP TA Y +P L +A+ALV SR FA A G + FAFVPFLD A H+ P A+F DA D LT LA L G E TI+Y + +L QYGFV
Sbjct: 92 PASLLLTAH-RSGRIGGLQGQTEVMWEAAGDLREEVGEELFQRGATWDVRLALAVYEATAG--GAGGFWDDYRKLMPPPPSMTHPLCLPQAMLPELQNVELQAKVQAKRALFQDLHPSLHAHA-THPVTASYTNRGFPMEY--------------------------IPRPLPYAYALVVSRCFAM--ADG-DTFAFVPFLDMAQHADVPTANFRVDAQ-DGATLTALADLKPGEEVTINYDPDYSSEQLFAQYGFV 314
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A7S0NTJ5_9EUKA (Hypothetical protein n=2 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NTJ5_9EUKA) HSP 1 Score: 152 bits (385), Expect = 1.340e-37 Identity = 104/258 (40.31%), Postives = 133/258 (51.55%), Query Frame = 1
Query: 1 PGAICLWARARDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISY-GKSLDNNRLMTQYGFV 771
P +CL A R G +GGL GQT+ + +AAGDLR V +E G TWDVRLALA+ EATA GGPFW YRR LPLP T PP LL EL + + R + LR L+P L + VHP T+ YA +P LQW ++LV SR FA + + FAFVPFLD HS P+A+F ++ ++ L+TL + AG TISY G + D+ R+ YGFV
Sbjct: 56 PSELCLTAH-RSGVIGGLIGQTDAMVDAAGDLRDEVGEEAFNQGATWDVRLALAVFEATAG--CGGPFWDEYRRLLPLPPFATAAASLPPVLLEELQDPVLQKRGLAKDALLRELYPSLATHS-VHPVTSSYAAM--------------------------DAPLELVPLPLQWTYSLVVSRCFAM---ADEDTFAFVPFLDMCQHSASPSANF--TSSDGDFVLSTLRRMQAGEAVTISYDGDAYDSRRMFELYGFV 278
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A7S4F9T8_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F9T8_CHRCT) HSP 1 Score: 136 bits (342), Expect = 6.910e-32 Identity = 93/247 (37.65%), Postives = 123/247 (49.80%), Query Frame = 1
Query: 31 RDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISY-GKSLDNNRLMTQYGF 768
R G V GL GQT+++ +AAGDLR V ++ G TWDVRLALA+ EATA GGPFW YR+ LPLP P L+ EL + + RA+Q+ L L+P L S HPATA Y +P+ L W ++V SR F+ + + FAFVPFLD H+ P A+F + + ++ LT L P+ AG E TISY G + R+ YGF
Sbjct: 157 RSGVVSGLIGQTDVMLDAAGDLRSEVGEKMFERGATWDVRLALAVFEATAG--CGGPFWDRYRQLLPLPPFSMSAASLPEFLIDELQDPVLEQRAKQKASMLVSLYPAL-SQHAAHPATAMYIRMGAPLEM--------------------------IPSPLAWCHSMVVSRCFSM---ADVDTFAFVPFLDMCQHAEAPTANFS--SVSGDFELTALRPIEAGEEITISYDGNEYASRRMFELYGF 369
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A2P6V4L4_9CHLO (Ribulose-1,5 bisphosphate carboxylase oxygenase large subunit N-chloroplastic n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V4L4_9CHLO) HSP 1 Score: 130 bits (326), Expect = 3.940e-30 Identity = 103/252 (40.87%), Postives = 121/252 (48.02%), Query Frame = 1
Query: 70 LIWEAAGDLRVPV-------TDEQAADGLTWDVRLALALHEATADPMAGG--PFWAHYRR-FLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSP-RPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLD--NNRLMTQYGFVLPGNP 786
L+ + A LRVP Q D L WDV ALAL D +AGG FW Y LP P +T+PLCFPPALL EL ++ +A A QQQRL LFP L+SS+ A PT LQW F VRSRAF G + FA VPFLD ANH+P +P+ DF + +L L L G EATISY + D N RLM QYGFVLPG+P
Sbjct: 5 LVVDYAAGLRVPPGAWPRLRKGVQKDDSLPWDVLQALAL----LDGLAGGGDAFWERYSNAVLPAPTQLTLPLCFPPALLPELQHEAIASAAAVQQQRLAGLFPGLSSSMA-----------------------------------------ADGPTWLQWGFGCVRSRAFKLGP----DCFASVPFLDLANHAPGQPSCDFRLSSDGSAVQLVALQELAPGQEATISYTGADDTTNQRLMAQYGFVLPGSP 207
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A7S1NQL8_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NQL8_9EUGL) HSP 1 Score: 120 bits (300), Expect = 1.370e-27 Identity = 87/229 (37.99%), Postives = 105/229 (45.85%), Query Frame = 1
Query: 136 TWDVRLALALHEATADPMAGGPFWAHYRRFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYGKSLDNNRLMTQYGFVLPGNPVAAVLSGFESPP 822
TWD+RLA+ L EA + PFWA Y + T+ P+ P LL EL ++DMA A QQQQRLR LFP + + PA F P+ L W +ALVRSR F AG + FAFVPFLD ANH P ADF Y + L + + E TISYG + DN RL QYGFV PG L G + P
Sbjct: 14 TWDIRLAIKLLEAIDGRWS--PFWASYGELMQPYLTMANPMLLYPQLLVELQHEDMADAAVQQQQRLRDLFPDMVPGVYA-PAEEF-------------------------------------PSPLMWTWALVRSRCFTAGE----QAFAFVPFLDMANHLEIPNADFEYAPQDSCFYLRAVRQIRQNEEVTISYGAAYDNRRLFAQYGFVEPGGNPYDTLPGMDGLP 198
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Match: A0A2P6TPH9_CHLSO (Set domain n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TPH9_CHLSO) HSP 1 Score: 120 bits (302), Expect = 4.510e-26 Identity = 89/226 (39.38%), Postives = 105/226 (46.46%), Query Frame = 1
Query: 118 QAADGLTWDVRLALALHEATADPMAGG--PFWAHYR-RFLPLPHTVTVPLCFPPALLRELHNDDMAGRAEQQQQRLRRLFPLLTSSLLVHPATAFYATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAMPTALQWAFALVRSRAFAAGAASGFEEFAFVPFLDQANHSPRPAADFGYDAAADEWRLTTLAPLPAGAEATISYG--KSLDNNRLMTQYGFVLPG 780
Q D L WD+ ALAL D +AGG PFW Y LP P +T+PLCFP LL EL + + A+ QQQRL LFP L+ ++ P+ LQW+FA VRSRAF + F FVPFLD ANH+P P+ DF A L L PL AG EATISY + N RLM QYGFV G
Sbjct: 94 QKDDSLPWDILQALAL----LDALAGGADPFWERYAAEVLPAPLALTLPLCFPAELLPELQHGAIIAAAQAQQQRLAALFPGLSGAMC-----------------------------------------EGGPSWLQWSFACVRSRAFELRK----DCFGFVPFLDGANHAPDPSCDFRLSADGHAVELVALHPLQAGDEATISYTGPAGMTNQRLMAQYGFVFTG 270 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1440.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1440.4.1 >prot_P-wetherbeei_contig1440.4.1 ID=prot_P-wetherbeei_contig1440.4.1|Name=mRNA_P-wetherbeei_contig1440.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=482bp PGAICLWARARDGAVGGLQGQTELIWEAAGDLRVPVTDEQAADGLTWDVRback to top mRNA from alignment at P-wetherbeei_contig1440:5450..7184- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1440.4.1 ID=mRNA_P-wetherbeei_contig1440.4.1|Name=mRNA_P-wetherbeei_contig1440.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1735bp|location=Sequence derived from alignment at P-wetherbeei_contig1440:5450..7184- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1440:5450..7184- >mRNA_P-wetherbeei_contig1440.4.1 ID=mRNA_P-wetherbeei_contig1440.4.1|Name=mRNA_P-wetherbeei_contig1440.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1446bp|location=Sequence derived from alignment at P-wetherbeei_contig1440:5450..7184- (Phaeothamnion wetherbeei SAG_119_79)back to top |