mRNA_P-wetherbeei_contig14378.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14378.1.1
Unique NamemRNA_P-wetherbeei_contig14378.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A1Z9U8J6_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9U8J6_9GAMM)

HSP 1 Score: 400 bits (1028), Expect = 1.910e-134
Identity = 187/260 (71.92%), Postives = 221/260 (85.00%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEMGTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDTQRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            FD VIRGG +VDGTR+PS+ GD+AI DG + + G V GRG +EIDA GL+VAPG ID+HTHYDAQLNWD YASQSCWHG+TSV++ LCGFGFAPC+PEDRERAM+RMTRVEAIP E+M+ GM+WDW TQ ++ +SLQ  GLGVNVA YIPHS +RAYVLG +D++RA ++ DE+  M++L+RDGYRAGALGLSTDHNLIDRD+DGS LPS IA EEE+  LLSVAREFNVGS EVTP NLH+G +E  LLERYAE SGRP
Sbjct:    8 FDTVIRGGRVVDGTRLPSFVGDVAITDGRVVQTGQVSGRGRKEIDATGLVVAPGVIDVHTHYDAQLNWDPYASQSCWHGVTSVVISLCGFGFAPCRPEDRERAMQRMTRVEAIPYEAMKQGMKWDWETQGEFFDSLQSHGLGVNVAGYIPHSVLRAYVLGTDDSKRADVSDDEMEQMKQLMRDGYRAGALGLSTDHNLIDRDHDGSLLPSGIAKEEELLELLSVAREFNVGSSEVTPHNLHMGEKEQQLLERYAEASGRP 267          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: UPI000AEEAADF (amidohydrolase family protein n=1 Tax=Novosphingobium lentum TaxID=145287 RepID=UPI000AEEAADF)

HSP 1 Score: 367 bits (941), Expect = 2.660e-121
Identity = 172/260 (66.15%), Postives = 209/260 (80.38%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEMGTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDTQRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +D+VIR G IVDGTR PS+ GD+A+  G +  +G V GRG +E+DA G IVAPGFIDIHTHYDAQ+ WD Y SQSCWHGIT+VI+ LCGFGFAPC+P+DRER MRRMTRVEAIP E+M+L MRWDWV Q+DY+ SL+R+GLGVN A YIPHSAIRAYV+G +D +R  L  DE+  ++ELVRDGYRAGALGLSTD +LIDRD DG  LPSA A   E+  LL + REFNVGS+EVTP ++ +G  EI LL+R+++ SGRP
Sbjct:    6 YDVVIRNGRIVDGTRAPSFIGDVAVSGGKVVSIGKVPGRGREEVDATGKIVAPGFIDIHTHYDAQVQWDPYCSQSCWHGITTVIMSLCGFGFAPCRPDDRERVMRRMTRVEAIPYEAMKLSMRWDWVGQDDYMTSLERSGLGVNAAFYIPHSAIRAYVMGTDD-RRKDLQGDELEQLKELVRDGYRAGALGLSTDFSLIDRDADGGLLPSASADMSEIEELLKIGREFNVGSVEVTPEDISLGEPEIELLQRFSDLSGRP 264          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A534XEB0_9DELT (Aminoacylase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534XEB0_9DELT)

HSP 1 Score: 289 bits (740), Expect = 3.180e-91
Identity = 141/262 (53.82%), Postives = 183/262 (69.85%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDT-QRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +DLVIRGG++VDGTR+P++  D+A+  G IA + GT+ GRG++E+DA G IVAPG +D+HTHYDAQLNWD Y + S WHG+T++ +G CGFGFAPC+PEDR+  MR M R+EAIP +SM  GMRWDW+T  +YL+SL+R GLGVNVA+  P+S +RA+VLG     +R  +TA E+  ++ L R+G  AGA G S D NLIDR  DGS LP+ +A+ EE  AL  V REF VG I  T P   +      L       SGRP
Sbjct:    4 YDLVIRGGTVVDGTRLPAFKADVAVAQGRIARISGTIAGRGKRELDASGCIVAPGAVDLHTHYDAQLNWDPYCTLSGWHGVTTLTIGQCGFGFAPCRPEDRDLNMRMMNRIEAIPYDSMVKGMRWDWITFPEYLDSLERQGLGVNVASLFPYSPLRAWVLGARAARERTSVTAAELAQLRALFREGMAAGAFGFSADRNLIDRPEDGSFLPTQVASREEFLALAEVLREFGVGHIGWTIPAEGLDGVRDPLANELMAASGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: W4LNJ1_9BACT (Amidohydro_3 domain-containing protein (Fragment) n=1 Tax=Candidatus Entotheonella factor TaxID=1429438 RepID=W4LNJ1_9BACT)

HSP 1 Score: 279 bits (714), Expect = 1.670e-89
Identity = 143/262 (54.58%), Postives = 180/262 (68.70%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDTQ-RAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +DLVIRGG+IVDGT +P +  D+AIKDG +A++ G ++  G +EIDA+G IVAPG ID+HTHYDAQLNWD YAS S W G+TSV VG CGFGFAP +PEDRE  MR M R+EAIP +SMQLGMRWDW T  +YL+SL R GLGVNV   +P S +R YV+G  + + R  +TA E+  M++++R+  +AGA G S D NL DR  DGS LPS +A+ EE   L  V  EF VG +  T    +   E+  LL      SGRP
Sbjct:    4 YDLVIRGGTIVDGTNIPRFKADLAIKDGRVAKISGKIQAAGAKEIDAQGCIVAPGAIDLHTHYDAQLNWDPYASISGWFGVTSVSVGQCGFGFAPTRPEDRELNMRMMNRIEAIPLKSMQLGMRWDWETFPEYLDSLDRQGLGVNVGALVPFSPLRGYVIGMREARSRTSVTASELNQMKDILREAMQAGAFGFSADKNLEDRTEDGSALPSHVASPEEFLGLSEVLSEFGVGHMGWTIGISNNAQEQHILLAEMMRRSGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: W4M9M7_9BACT (Amidohydro_3 domain-containing protein (Fragment) n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4M9M7_9BACT)

HSP 1 Score: 274 bits (700), Expect = 2.100e-87
Identity = 141/262 (53.82%), Postives = 177/262 (67.56%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDTQ-RAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +DLVIRGG+IVDGT +P +  D+AIKDG +A++ G +   G +EIDA+G IVAPG ID+HTHYDAQLNWD YAS S W G+TSV VG CGFGFAP +PEDRE  MR M R+EAIP +SMQLGMRWDW T  +YL+SL R GLGVNV   +P S +R YV+G  + + R  +T  E+  M++++R+  +AGA G S D NL DR  DGS LPS +A+  E   L  V  EF VG +  T    +   E+  LL      SGRP
Sbjct:    4 YDLVIRGGTIVDGTNIPRFKADLAIKDGRVAKISGKISSAGAKEIDAQGCIVAPGAIDLHTHYDAQLNWDPYASISGWFGVTSVSVGQCGFGFAPTRPEDRELNMRMMNRIEAIPLKSMQLGMRWDWETFPEYLDSLDRQGLGVNVGALVPFSPLRGYVIGMREARSRTSVTEAELNRMKDILREAMQAGAFGFSADKNLEDRTEDGSALPSHVASPAEFLGLSEVLSEFGVGHMGWTIGISNNAKEQHTLLAEMMRRSGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A2N0MIT4_9CHLR (Amidohydro_3 domain-containing protein n=1 Tax=SAR202 cluster bacterium Io17-Chloro-G9 TaxID=1926618 RepID=A0A2N0MIT4_9CHLR)

HSP 1 Score: 277 bits (708), Expect = 1.540e-86
Identity = 143/262 (54.58%), Postives = 180/262 (68.70%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDT-QRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            FDLVIRGG+IVDGT +P Y GD+A+K+G +A + G +   G +EIDA G IVAPG ID+HTHYDAQLNWD YAS S W G+TS+ VG CGFGFAP +P+DR+  MR M R+EAIP ESM+LGMRWDW T  +YL+SL R GLGVNV + IP S +R YVLG     +R  +T  E+  M+++V +  +AGA G+S D NL DR  DGS LPS +A++EE  AL  V  +F VG I  T       A++ A+L      SGRP
Sbjct:    4 FDLVIRGGTIVDGTGIPRYRGDLAVKNGKVAMISGRISAAGTKEIDASGCIVAPGAIDLHTHYDAQLNWDPYASLSGWFGVTSLTVGQCGFGFAPTRPDDRDLNMRMMNRIEAIPLESMRLGMRWDWETFPEYLDSLDRQGLGVNVGSLIPFSPLRGYVLGMIPARERTSVTPSELNQMKQIVYESMKAGAFGISADKNLEDRPEDGSWLPSHVASKEEFLALAQVLNQFGVGHIGWTIGISDDRADQRAMLAEMVRMSGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A2V7DGL6_9BACT (Aminoacylase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7DGL6_9BACT)

HSP 1 Score: 273 bits (697), Expect = 6.940e-85
Identity = 142/261 (54.41%), Postives = 173/261 (66.28%), Query Frame = 1
Query:   22 DLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDT-QRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            DLVIRGG++VDGT +P Y GD+ IK+G +A + G ++  G +EIDARG IVAPG ID+HTHYDAQLNWD YA+ S W G+TSV +G CGFGFAP +PEDRE  MR M R+EAIP  SMQLGMRWDW T  +YL+SL R GLGVNV   +P S +R YVLG +   +R  +T  E+  M+ L+     AGA G S D NL DR  DGS LPS +A+ EE  AL  V  EF+VG +  T        E+  LL      SGRP
Sbjct:    5 DLVIRGGTVVDGTGVPRYQGDVGIKNGRVARVSGRLQAGGAKEIDARGCIVAPGAIDLHTHYDAQLNWDPYATLSGWFGVTSVSIGQCGFGFAPTRPEDRELNMRMMNRIEAIPLRSMQLGMRWDWETFPEYLDSLDRQGLGVNVGALVPFSPLRGYVLGMKAARERTSVTEAELNEMKRLLHQAMTAGAFGFSADKNLEDRTEDGSALPSHVASPEEFLALADVLSEFSVGHLGWTIGISTTALEQQRLLTEMMRRSGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A7Y4UA66_9DELT (Amidohydrolase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4UA66_9DELT)

HSP 1 Score: 273 bits (698), Expect = 8.710e-85
Identity = 137/266 (51.50%), Postives = 183/266 (68.80%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEMGTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLN----WDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDTQRAKLTA--DEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +DL+++ G+IVDG RMP++ GDIAI+ G I  +G V+G   + IDA G IVAPGFIDIHTHYDA L+    WD YA+ S WHG+TSV +G CGFGFAP +PEDRERAMRRM R E+IP   MQ GM+WDWVT  +YL+SL R+GLG+N A+ +P+S +RA+V+G++  +  K TA  +++  M+ L+++G  AG  G S   ++ +RDYDG  LP+ +A  EE   +  V R+FN GSIE T  +   G     LLE  A  SGRP
Sbjct:    4 YDLLLKNGTIVDGLRMPAFRGDIAIRGGKIVAIGNVQGSATRVIDATGQIVAPGFIDIHTHYDAALSGGSKWDQYATLSGWHGVTSVAIGNCGFGFAPVRPEDRERAMRRMERTESIPLSCMQAGMKWDWVTFPEYLDSLDRSGLGINAASLVPYSPLRAWVMGNDAARDPKYTAKPEQVAQMKHLLKEGLEAGGFGFSASFSMANRDYDGGYLPTHVAPREEFLEMAKVLRDFNRGSIEWTMGHALQGLGMDFLLE-LATTSGRP 268          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A2N0LKP6_9CHLR (Amidohydro_3 domain-containing protein n=15 Tax=root TaxID=1 RepID=A0A2N0LKP6_9CHLR)

HSP 1 Score: 266 bits (679), Expect = 3.280e-82
Identity = 138/262 (52.67%), Postives = 172/262 (65.65%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDT-QRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            FDLVIRGG +VDGT +P    D+ IKDG +A + G +   G +E+DA G IVAPG ID+HTHYDAQLNWD YAS S W G+TS+ VG CGFGFAP +PEDR+  MR M R+EAIP ESM+ GMRWDW T  +Y++SL R GLGVNV   +P S +R YVLG     +R  +T  E+  M++++ D  +AGA G+S D NL DR  DGS LPS +A++EE  AL  V  EF VG I  T        E+  +L      SGRP
Sbjct:    4 FDLVIRGGIVVDGTGLPRIRADVGIKDGRVAMVSGRISASGAKELDASGCIVAPGAIDLHTHYDAQLNWDPYASLSGWFGVTSLTVGQCGFGFAPTRPEDRDLNMRMMNRIEAIPLESMRQGMRWDWETFPEYMDSLDRQGLGVNVGALVPFSPLRGYVLGMIPARERTSVTEAELNQMKQILHDSMKAGAFGISADKNLEDRPEDGSWLPSHVASKEEFFALAQVMSEFGVGQIGWTIGISDDRPEQRDMLAEMVRMSGRP 265          
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Match: A0A2N0LBN9_9CHLR (Amidohydro_3 domain-containing protein n=1 Tax=SAR202 cluster bacterium Io17-Chloro-G4 TaxID=1926613 RepID=A0A2N0LBN9_9CHLR)

HSP 1 Score: 266 bits (679), Expect = 3.280e-82
Identity = 135/262 (51.53%), Postives = 177/262 (67.56%), Query Frame = 1
Query:   19 FDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEM-GTVRGRGEQEIDARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAPCKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVNVATYIPHSAIRAYVLGDEDT-QRAKLTADEIVHMQELVRDGYRAGALGLSTDHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGAEEIALLERYAEYSGRP 798
            +DLVIRGG+IVDGT +P + GD+ +K+G +A++ G +   G +EIDA G IVAPG ID+HTHYDAQLNWD YAS S W G+TS+ +G CGFGFAP KPEDRE  MR M R+EAIP ESM+LGMRWDW T   +L+SL R GLGVNV   +P+S +R YVLG     +R  +T  E+  M+++  +  +AGA G+S D N+ DR  DGS LPS +A+ EE+ AL  V  ++ VG +  T        E+  L+ +    SGRP
Sbjct:    4 YDLVIRGGTIVDGTGVPKFRGDLGVKNGRVAKISGKISAGGAEEIDASGCIVAPGAIDLHTHYDAQLNWDPYASLSGWFGVTSLTIGQCGFGFAPTKPEDRELNMRMMNRIEAIPLESMRLGMRWDWETFPQFLDSLDRQGLGVNVGALLPYSPMRGYVLGMMAARERTSVTEAELNQMKQITHEAMQAGAFGISWDKNMEDRPEDGSFLPSHVASPEEVLALAEVVGQYGVGHLGWTIGVSEHHEEQHELMTQMMRISGRP 265          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14378.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Z9U8J6_9GAMM1.910e-13471.92Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]
UPI000AEEAADF2.660e-12166.15amidohydrolase family protein n=1 Tax=Novosphingob... [more]
A0A534XEB0_9DELT3.180e-9153.82Aminoacylase n=1 Tax=Deltaproteobacteria bacterium... [more]
W4LNJ1_9BACT1.670e-8954.58Amidohydro_3 domain-containing protein (Fragment) ... [more]
W4M9M7_9BACT2.100e-8753.82Amidohydro_3 domain-containing protein (Fragment) ... [more]
A0A2N0MIT4_9CHLR1.540e-8654.58Amidohydro_3 domain-containing protein n=1 Tax=SAR... [more]
A0A2V7DGL6_9BACT6.940e-8554.41Aminoacylase n=2 Tax=Candidatus Rokubacteria bacte... [more]
A0A7Y4UA66_9DELT8.710e-8551.50Amidohydrolase family protein n=1 Tax=Deltaproteob... [more]
A0A2N0LKP6_9CHLR3.280e-8252.67Amidohydro_3 domain-containing protein n=15 Tax=ro... [more]
A0A2N0LBN9_9CHLR3.280e-8251.53Amidohydro_3 domain-containing protein n=1 Tax=SAR... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14378contigP-wetherbeei_contig14378:1..798 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1479239.JQMU01000001_gene182
PFAMsAmidohydro_3
Model size798
Max annot lvl204457|Sphingomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.77e-73
EggNOG OGsCOG3653@1|root,COG3653@2|Bacteria,1MWWY@1224|Proteobacteria,2TSZZ@28211|Alphaproteobacteria,2JZXP@204457|Sphingomonadales
DescriptionCOG3653 N-acyl-D-aspartate D-glutamate deacylase
Cds size798
COG categoryQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186019.7804701-CDS-P-wetherbeei_contig14378:0..7981683186019.7804701-CDS-P-wetherbeei_contig14378:0..798Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14378 1..798 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14378.1.1prot_P-wetherbeei_contig14378.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14378 1..798 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14378.1.1

>prot_P-wetherbeei_contig14378.1.1 ID=prot_P-wetherbeei_contig14378.1.1|Name=mRNA_P-wetherbeei_contig14378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=266bp
MPNPTYFDLVIRGGSIVDGTRMPSYYGDIAIKDGVIAEMGTVRGRGEQEI
DARGLIVAPGFIDIHTHYDAQLNWDAYASQSCWHGITSVIVGLCGFGFAP
CKPEDRERAMRRMTRVEAIPRESMQLGMRWDWVTQNDYLNSLQRAGLGVN
VATYIPHSAIRAYVLGDEDTQRAKLTADEIVHMQELVRDGYRAGALGLST
DHNLIDRDYDGSRLPSAIATEEEMAALLSVAREFNVGSIEVTPPNLHIGA
EEIALLERYAEYSGRP
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mRNA from alignment at P-wetherbeei_contig14378:1..798-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14378.1.1 ID=mRNA_P-wetherbeei_contig14378.1.1|Name=mRNA_P-wetherbeei_contig14378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig14378:1..798- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCAACCCCACATATTTTGATCTCGTCATCCGCGGCGGAAGTATCGT GGATGGCACGCGCATGCCGTCCTACTACGGTGATATTGCCATCAAGGACG GAGTCATTGCCGAAATGGGCACTGTGCGCGGCCGCGGCGAGCAGGAAATC GACGCGCGCGGCCTCATCGTCGCACCCGGCTTTATTGATATCCACACGCA TTATGACGCTCAATTGAATTGGGACGCTTACGCGTCGCAGTCTTGTTGGC ATGGCATCACCAGCGTCATCGTCGGTCTGTGCGGATTTGGCTTTGCGCCG TGCAAGCCGGAAGATCGCGAACGCGCCATGCGCCGCATGACCAGGGTCGA GGCCATCCCGCGTGAATCGATGCAACTCGGCATGCGTTGGGACTGGGTCA CGCAGAACGATTATCTGAATTCCCTGCAGCGCGCCGGCCTCGGCGTCAAT GTCGCGACCTATATCCCGCACTCAGCCATCCGTGCCTATGTGCTTGGCGA CGAAGACACACAACGGGCCAAGCTGACTGCCGACGAGATTGTTCACATGC AGGAACTGGTGCGCGATGGTTACCGCGCGGGGGCCCTCGGGCTGTCAACC GATCACAATCTGATCGACCGTGACTACGATGGCTCGAGATTGCCGAGTGC GATCGCGACCGAGGAAGAAATGGCGGCGCTTCTGTCAGTCGCTCGCGAAT TCAACGTCGGATCGATCGAGGTGACACCGCCCAATCTCCATATCGGTGCG GAGGAGATCGCGCTACTCGAACGCTACGCTGAGTACAGCGGGCGGCCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14378:1..798-

>mRNA_P-wetherbeei_contig14378.1.1 ID=mRNA_P-wetherbeei_contig14378.1.1|Name=mRNA_P-wetherbeei_contig14378.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=798bp|location=Sequence derived from alignment at P-wetherbeei_contig14378:1..798- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCAACCCCACATATTTTGATCTCGTCATCCGCGGCGGAAGTATCGT
GGATGGCACGCGCATGCCGTCCTACTACGGTGATATTGCCATCAAGGACG
GAGTCATTGCCGAAATGGGCACTGTGCGCGGCCGCGGCGAGCAGGAAATC
GACGCGCGCGGCCTCATCGTCGCACCCGGCTTTATTGATATCCACACGCA
TTATGACGCTCAATTGAATTGGGACGCTTACGCGTCGCAGTCTTGTTGGC
ATGGCATCACCAGCGTCATCGTCGGTCTGTGCGGATTTGGCTTTGCGCCG
TGCAAGCCGGAAGATCGCGAACGCGCCATGCGCCGCATGACCAGGGTCGA
GGCCATCCCGCGTGAATCGATGCAACTCGGCATGCGTTGGGACTGGGTCA
CGCAGAACGATTATCTGAATTCCCTGCAGCGCGCCGGCCTCGGCGTCAAT
GTCGCGACCTATATCCCGCACTCAGCCATCCGTGCCTATGTGCTTGGCGA
CGAAGACACACAACGGGCCAAGCTGACTGCCGACGAGATTGTTCACATGC
AGGAACTGGTGCGCGATGGTTACCGCGCGGGGGCCCTCGGGCTGTCAACC
GATCACAATCTGATCGACCGTGACTACGATGGCTCGAGATTGCCGAGTGC
GATCGCGACCGAGGAAGAAATGGCGGCGCTTCTGTCAGTCGCTCGCGAAT
TCAACGTCGGATCGATCGAGGTGACACCGCCCAATCTCCATATCGGTGCG
GAGGAGATCGCGCTACTCGAACGCTACGCTGAGTACAGCGGGCGGCCG
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