mRNA_P-wetherbeei_contig14368.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A7S2WN45_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WN45_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 3.470e-14 Identity = 65/204 (31.86%), Postives = 90/204 (44.12%), Query Frame = 1
Query: 1 VHQLMAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPI-----PLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXXVSKDRGDESVPGDESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGN-GGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGK--ARVARAADCPCKSGRRYKECC 588
+HQL APR EL + +P A + +HLSYHGE HYNSVRA DD PA+ I P+P+AA T ++ ++ V GD A D ++ + +P + G GG A ++ PE G G+ S SG SG+ + ARA CPC SG++YK+CC
Sbjct: 68 IHQLDAPRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRISVPWVDLEVIRGTLRE-----VNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGG--GKLSASGKSGQKSGKTARADLCPCGSGKKYKKCC 264
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A7S2WLR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WLR9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 6.440e-14 Identity = 65/204 (31.86%), Postives = 90/204 (44.12%), Query Frame = 1
Query: 1 VHQLMAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPI-----PLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXXVSKDRGDESVPGDESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGN-GGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGK--ARVARAADCPCKSGRRYKECC 588
+HQL APR EL + +P A + +HLSYHGE HYNSVRA DD PA+ I P+P+AA T ++ ++ V GD A D ++ + +P + G GG A ++ PE G G+ S SG SG+ + ARA CPC SG++YK+CC
Sbjct: 167 IHQLDAPRLELYASQPEFATATLHLSYHGEFHYNSVRAADDFGPGPAQAIAMDRPPMPAAATGGTDRGSSSAENLSAVEKQVRISVPWVDLEVIRGTLRE-----VNGDADAAVELLVSGFIPPDPAAEGDHDAVSQNPGAIGVVGGEVAASSAGSADSSPEAGDQGG--GKLSASGKSGQKSGKTARADLCPCGSGKKYKKCC 363
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: D7FGR1_ECTSI (OTU domain-containing protein, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGR1_ECTSI) HSP 1 Score: 63.5 bits (153), Expect = 1.780e-8 Identity = 63/217 (29.03%), Postives = 84/217 (38.71%), Query Frame = 1
Query: 1 VHQLMAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQEGGSDXXXXXXXXXXXXXXXXXXXXXXX-------VSKDRGDESV---------PG-----DESAGXXXXXXXXXXXXXXXRADMESDAPSPRSRGNGGRTTRGLATTSSRQPEKGQPAATSGRCSGSGSSGKARVARAADCPCKSGRRYKECC 588
VHQ APRF + ++ A +HLSYHGE+HYNSVRA+ D + PA PI L T +GGS + RGD+++ PG D +AG E+ P +G GG G+A S + +K VARA+DCPC SG +YK+CC
Sbjct: 143 VHQFKAPRFFIPCEK---ARRTIHLSYHGEHHYNSVRAIGDEANGPALPITL------QTPTSKGGSHKRESPWPEEEAAVARSCPWASPPNIVAALETTGGRGDDAIELLIAARNEPGLEEGVDNTAGDKKGTGKLEDGGDSGEKPQENGRPGE-GKGRGG----GVAKKSEKAAKK--------------------VARASDCPCGSGLKYKKCC 325
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A8J2WFC2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WFC2_9STRA) HSP 1 Score: 59.3 bits (142), Expect = 3.680e-7 Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 1
Query: 1 VHQLMAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIP 153
VHQL AP+FE+ +D + A VHLSYHGE HYNSVR DD+SA P+ +P
Sbjct: 144 VHQLEAPKFEICADDNS-ATRTVHLSYHGEAHYNSVRLKDDYSAEPSSGLP 193
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: UPI001C4F07EB (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 isoform X1 n=3 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4F07EB) HSP 1 Score: 57.0 bits (136), Expect = 3.340e-6 Identity = 28/65 (43.08%), Postives = 44/65 (67.69%), Query Frame = 1
Query: 1 VHQLMAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQEG 195
+H++M+PR+ +R+ A +HLSYH E HYNSVR DD P++PI + + A +ST++Q+G
Sbjct: 125 IHRMMSPRWYIRNFDDH-GARMIHLSYHNEEHYNSVRLKDDPCNGPSKPITIKADANLSTTSQQG 188
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A059AYY5_EUCGR (OTU domain-containing protein n=2 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AYY5_EUCGR) HSP 1 Score: 55.5 bits (132), Expect = 1.030e-5 Identity = 29/65 (44.62%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 VHQLMAPRFELRS-DRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQE 192
+H+ M+PR+ +R+ DRP A +HLSYH E HYNSVR +D PARPI + + + +S+S+++
Sbjct: 190 IHRNMSPRWYIRNFDRP--GAHMIHLSYHDEEHYNSVRLKEDTGDGPARPITIKADSNLSSSSRQ 252
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A218W1U3_PUNGR (OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 isoform X1 n=3 Tax=Punica granatum TaxID=22663 RepID=A0A218W1U3_PUNGR) HSP 1 Score: 55.5 bits (132), Expect = 1.160e-5 Identity = 27/68 (39.71%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 1 VHQLMAPRFELRS-DRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQEGGS 201
+H+ M+PR+ +R+ ++P + +HLSYH E HYNSVR +DH PARP+ + + + +S+S+++ S
Sbjct: 158 IHRSMSPRWYIRNFEKP--GSRMIHLSYHDEEHYNSVRLREDHGDGPARPVLIKADSDLSSSSRQAKS 223
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A4Y7J3A2_PAPSO (OTU domain-containing protein n=2 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7J3A2_PAPSO) HSP 1 Score: 54.7 bits (130), Expect = 2.020e-5 Identity = 28/67 (41.79%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 1 VHQLMAPRFELRS--DRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQEG 195
+H+LM+PR+ +R+ D T +HLSYH E HYNSVR+ +D + PARP+ + + A +S + +G
Sbjct: 128 IHKLMSPRWYIRNFEDHGT---RVIHLSYHSEEHYNSVRSKEDPGSGPARPVVIKADADLSAMSNKG 191
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: UPI00192F004D (LOW QUALITY PROTEIN: OVARIAN TUMOR DOMAIN-containing deubiquitinating enzyme 7 n=1 Tax=Eucalyptus grandis TaxID=71139 RepID=UPI00192F004D) HSP 1 Score: 53.9 bits (128), Expect = 2.390e-5 Identity = 28/65 (43.08%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 VHQLMAPRFELRS-DRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQE 192
+H+ M+PR+ +R+ D+P A +HLSYH E HYNSVR +D PARPI + + + +S+S+++
Sbjct: 131 IHRNMSPRWYIRNFDQP--GARMIHLSYHDEEHYNSVRLKEDTGDGPARPITIKADSNLSSSSRQ 193
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Match: A0A059AYX9_EUCGR (OTU domain-containing protein (Fragment) n=4 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AYX9_EUCGR) HSP 1 Score: 53.9 bits (128), Expect = 2.670e-5 Identity = 28/65 (43.08%), Postives = 45/65 (69.23%), Query Frame = 1
Query: 1 VHQLMAPRFELRS-DRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSAAVVSTSAQE 192
+H+ M+PR+ +R+ D+P A +HLSYH E HYNSVR +D PARPI + + + +S+S+++
Sbjct: 48 IHRNMSPRWYIRNFDQP--GARMIHLSYHDEEHYNSVRLKEDTGDGPARPITIKADSNLSSSSRQ 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14368.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14368.2.1 >prot_P-wetherbeei_contig14368.2.1 ID=prot_P-wetherbeei_contig14368.2.1|Name=mRNA_P-wetherbeei_contig14368.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MAPRFELRSDRPTVAASAVHLSYHGENHYNSVRALDDHSAAPARPIPLPSback to top mRNA from alignment at P-wetherbeei_contig14368:886..1668- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14368.2.1 ID=mRNA_P-wetherbeei_contig14368.2.1|Name=mRNA_P-wetherbeei_contig14368.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig14368:886..1668- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14368:886..1668- >mRNA_P-wetherbeei_contig14368.2.1 ID=mRNA_P-wetherbeei_contig14368.2.1|Name=mRNA_P-wetherbeei_contig14368.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig14368:886..1668- (Phaeothamnion wetherbeei SAG_119_79)back to top |