mRNA_P-wetherbeei_contig14347.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14347.1.1
Unique NamemRNA_P-wetherbeei_contig14347.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A1B3NFR2_9HYPH (tRNA (Uracil-5-)-methyltransferase family protein n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A1B3NFR2_9HYPH)

HSP 1 Score: 795 bits (2054), Expect = 4.020e-290
Identity = 417/417 (100.00%), Postives = 417/417 (100.00%), Query Frame = 1
Query:   10 MTLAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKKS 1260
            MTLAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKKS
Sbjct:    1 MTLAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKKS 417          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A0Q9IRU6_9HYPH (RNA methyltransferase n=3 Tax=unclassified Bosea TaxID=2653178 RepID=A0A0Q9IRU6_9HYPH)

HSP 1 Score: 721 bits (1860), Expect = 1.200e-260
Identity = 369/412 (89.56%), Postives = 390/412 (94.66%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKK 1257
            MNEIL V RLG RGDGIA + TGDVFVPYALPGETVR VRDGER QLVEIITPA+SRIA ICPLFTRCGGCAAQHM+  LYREWKRRQVET L RAG+ AP+A+IVD HGAGRRRVTFHARREGPGMLVGFMVARSHDL+A+PACPVLAPGLARAPAAAQL+ANRLGGSNKPLD+QVTASEAGLDIDIRGHGPAG+KLRLSLTEAAERLDLARLSMHG+IVVERRPPQQRMG+AMV PAPGGFLQAT AGEDAI ALVLAALP KAKRVADLFAGCGPI+FRLAERAQVLAVESDKAA+LALTRAA+ TQGLKPIAS+VRDLFRRPLLEHELNGFDAV+LDPPRAGAEAQA+RLAAAKT TVIYVSCDA +FARDAAILIAGGYAL+GVTPVDQFRYSAHIELVGVFRR KK
Sbjct:    1 MNEILVVARLGQRGDGIAPSETGDVFVPYALPGETVRVVRDGERGQLVEIITPADSRIAAICPLFTRCGGCAAQHMAPGLYREWKRRQVETALSRAGVTAPVAEIVDGHGAGRRRVTFHARREGPGMLVGFMVARSHDLIAIPACPVLAPGLARAPAAAQLIANRLGGSNKPLDLQVTASEAGLDIDIRGHGPAGDKLRLSLTEAAERLDLARLSMHGDIVVERRPPQQRMGKAMVGPAPGGFLQATTAGEDAIAALVLAALPIKAKRVADLFAGCGPISFRLAERAQVLAVESDKAAVLALTRAAAATQGLKPIASEVRDLFRRPLLEHELNGFDAVVLDPPRAGAEAQAKRLAAAKTGTVIYVSCDAATFARDAAILIAGGYALEGVTPVDQFRYSAHIELVGVFRRRKK 412          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A0N0MCS5_9HYPH (RNA methyltransferase n=1 Tax=Bosea vaviloviae TaxID=1526658 RepID=A0A0N0MCS5_9HYPH)

HSP 1 Score: 695 bits (1794), Expect = 1.580e-250
Identity = 356/413 (86.20%), Postives = 384/413 (92.98%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKKS 1260
            MNEILSV RLG RGDGIA+ P GDVFVPYALPGETVRAVRDG+R Q+VEIITPA+SR+A ICPLFTRCGGCAAQHMSE LYREWKRRQV T L RAG+ AP+A+IVDAHGAGRRRVTFHARREG GMLVGFM ARSHDL+AVPACPVLAPGLARAPAAAQL+ANRLGGSNKPLDIQ+TASEAGLD+DIRGHGPAG+KLRLSLTEAAERLDLARLSMHGEI+VERRPPQQRMG+AMVAPA GGFLQATA GE+ I  LVLAALP K KRVADLFAGCGP +FRLAERAQV AVESDKAAILALTR A+ TQGLKPIA+++RDLFRRPLLEHELN FDAV+LDPPRAGAEAQ RRLA +K+ TV+YVSCD GSFARDAAILIAGGYAL+GVTP+DQFRYSAHIELVGVFRRAKK+
Sbjct:    1 MNEILSVVRLGQRGDGIAEAPGGDVFVPYALPGETVRAVRDGDRGQIVEIITPADSRVAAICPLFTRCGGCAAQHMSEGLYREWKRRQVVTALARAGVEAPVAEIVDAHGAGRRRVTFHARREGLGMLVGFMAARSHDLIAVPACPVLAPGLARAPAAAQLLANRLGGSNKPLDIQLTASEAGLDVDIRGHGPAGDKLRLSLTEAAERLDLARLSMHGEIIVERRPPQQRMGKAMVAPAAGGFLQATAQGEETIAGLVLAALP-KVKRVADLFAGCGPFSFRLAERAQVHAVESDKAAILALTRGAAMTQGLKPIAAEIRDLFRRPLLEHELNAFDAVVLDPPRAGAEAQVRRLAGSKSGTVVYVSCDVGSFARDAAILIAGGYALEGVTPIDQFRYSAHIELVGVFRRAKKT 412          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A0N1LB51_9HYPH (RNA methyltransferase n=1 Tax=Bosea sp. AAP35 TaxID=1523417 RepID=A0A0N1LB51_9HYPH)

HSP 1 Score: 687 bits (1774), Expect = 1.820e-247
Identity = 357/416 (85.82%), Postives = 381/416 (91.59%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGP-----GMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAK 1254
            MNEILSV RLG RGDGIA TP GDVFVPYALPGETVRAVRDG+RAQ+VEIITPA+SRIAPICPLFT CGGC AQ M  +LY  WKR+QV T L RAGIAAP+A IVD HGAGRRRVTFHARREG      GMLVGFMVARSHDL+AVPACPVL+P LARAPA AQLVANRLGGSNKPLDIQ+TAS+AGLD+DIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMG+AMVAPAPGGFLQAT AGE+AI ALVLAA+PAKAKRVADLFAGCGP + RLAERAQV AVESDKAA+LAL+RAA  TQGLKPIA+++RDLFRRPLLEHEL+ FDAV+LDPPRAGAEAQ RRLAAAKT TV+YVSCD GSFARDAAILIAGGYAL+GVTPVDQFRYSAHIELVGVFRRAK
Sbjct:    1 MNEILSVARLGQRGDGIAPTPGGDVFVPYALPGETVRAVRDGDRAQIVEIITPADSRIAPICPLFTICGGCVAQQMEPALYDGWKRQQVVTALSRAGIAAPVAGIVDGHGAGRRRVTFHARREGDDRQGLGMLVGFMVARSHDLIAVPACPVLSPALARAPAVAQLVANRLGGSNKPLDIQITASDAGLDVDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGKAMVAPAPGGFLQATVAGEEAISALVLAAVPAKAKRVADLFAGCGPFSLRLAERAQVHAVESDKAALLALSRAAGVTQGLKPIATEIRDLFRRPLLEHELDAFDAVVLDPPRAGAEAQVRRLAAAKTRTVVYVSCDVGSFARDAAILIAGGYALEGVTPVDQFRYSAHIELVGVFRRAK 416          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A1H5TML8_9HYPH (23S rRNA (Uracil1939-C5)-methyltransferase n=2 Tax=Bosea lathyri TaxID=1036778 RepID=A0A1H5TML8_9HYPH)

HSP 1 Score: 677 bits (1748), Expect = 1.780e-243
Identity = 348/419 (83.05%), Postives = 378/419 (90.21%), Query Frame = 1
Query:    1 LPPMTLAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKK 1257
            +P   LAMNE L++ RLG RGDGIA+TPTG VFVPY LPGETVR VRDGER QLVEII PA+SRIA ICPLFTRCGGCAAQHM+  LY EWKR+QV T L RAGI AP+A+IVDAHGAGRRRVTFHARREG GMLVGFM ARSHDL+AV ACPVLAPGL RAPA AQL+ANRLGGSNKPLD+Q+TAS+ GLD+DIRGHGPAG+KLRLSLTEAAERLDLARL+MHGEI+VERRPP QRMG+A VAPA GGFLQAT  GE+ I ALVLAALP KAK VADLFAGCGP +FRLAER +VLAVESDKAAILALTRAA  TQGLKPIA++VRDLFRRPLLEHELNGFDAV+LDPPRAGAEAQA+RLAA+K  TV+YVSCDAG+FARDAAILIAGGYAL+GVTPVDQFRYSAHIELVGVFRR KK
Sbjct:    1 MPGTMLAMNETLTIARLGARGDGIAETPTGQVFVPYTLPGETVRVVRDGERGQLVEIIAPAQSRIAAICPLFTRCGGCAAQHMAPGLYSEWKRQQVVTALGRAGIEAPVAEIVDAHGAGRRRVTFHARREGIGMLVGFMQARSHDLIAVEACPVLAPGLVRAPAVAQLLANRLGGSNKPLDLQITASDGGLDVDIRGHGPAGDKLRLSLTEAAERLDLARLAMHGEIIVERRPPLQRMGKASVAPASGGFLQATVTGEETIAALVLAALP-KAKHVADLFAGCGPFSFRLAERMKVLAVESDKAAILALTRAAGATQGLKPIAAEVRDLFRRPLLEHELNGFDAVVLDPPRAGAEAQAKRLAASKLGTVVYVSCDAGTFARDAAILIAGGYALEGVTPVDQFRYSAHIELVGVFRRPKK 418          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A1D7UAI2_9HYPH (RNA methyltransferase n=4 Tax=Bosea TaxID=85413 RepID=A0A1D7UAI2_9HYPH)

HSP 1 Score: 659 bits (1701), Expect = 1.970e-236
Identity = 338/412 (82.04%), Postives = 370/412 (89.81%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKK 1257
            MNE L +  LG +GDG+A+T  G VFVPYALPGETVR VRDG+R QLVEII PA SRIA ICPLFTRCGGCAAQHM E LY+ WKR+QV TTLERAG+AAP+AD+VDAHGAGRRRVTFHARREG GM+VGFM ARSHDLVAV ACPVLAPGLARAPA AQL+ANRLGGSNKPLD+QVTAS+ GLD+DIRGHGPAG+KLRLSLTEAAERLDLARLSMHGEI+VERR P Q+MG+AMVAPAPGGFLQAT  GE  I ALV++ALP KAKRVADLFAGCGP +FRLAE+AQV AVES+KAAILALTRAA  TQGLK I S+ RDLFRRPLLEHELN FDAV+LDPPRAGAEAQARRLAA+K  +V+YVSCD GSFARDAAILIAGGYAL+GVTP+DQFRYSAHIELVG+FRRA K
Sbjct:    1 MNETLLIDHLGQKGDGVAKTANGPVFVPYALPGETVRVVRDGDRGQLVEIIAPAASRIAAICPLFTRCGGCAAQHMDEGLYKAWKRQQVVTTLERAGVAAPVADLVDAHGAGRRRVTFHARREGIGMMVGFMAARSHDLVAVEACPVLAPGLARAPAVAQLLANRLGGSNKPLDLQVTASDTGLDVDIRGHGPAGDKLRLSLTEAAERLDLARLSMHGEIIVERRSPLQKMGKAMVAPAPGGFLQATTLGEGTISALVVSALP-KAKRVADLFAGCGPFSFRLAEKAQVHAVESEKAAILALTRAAGATQGLKRITSETRDLFRRPLLEHELNAFDAVVLDPPRAGAEAQARRLAASKVASVVYVSCDVGSFARDAAILIAGGYALEGVTPIDQFRYSAHIELVGLFRRAGK 411          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A0Q6KRA3_9HYPH (RNA methyltransferase n=2 Tax=Bosea sp. Leaf344 TaxID=1736346 RepID=A0A0Q6KRA3_9HYPH)

HSP 1 Score: 655 bits (1689), Expect = 1.420e-234
Identity = 337/414 (81.40%), Postives = 370/414 (89.37%), Query Frame = 1
Query:   16 LAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKK 1257
            +AMNE L++ RLG RGDG+  +  G VFVPYALPGETVRAVRDGERAQLVEII  +ESRIA ICPLFTRCGGCAAQHM   LYR WKR Q+ T L+RAG+AA + ++VDAHGAGRRRVTFHARREG GM+VGFM ARSHDLVAV ACPVLAPGLARAPA AQL+ANRLGGSNKPLDIQ+TASEAGLD+DIRGHGPAG+KLRLSLTEAAERLDLARLSMHG+I+VERRPP QRMG+A VAPAPGGFLQAT AGE+AI ALVLA LP K +RVADLF+GCGPIAFRLAERAQV+A ESDKAA+LALTR +  TQGLKPIAS+VRDLFRRPLLEHEL+GFDAV+LDPPRAGAEAQ RRLAA+K  T+ YVSCDA SFARDAAILI GGYAL GVTPVDQFRYSAH+ELVG+FRR  K
Sbjct:    1 MAMNESLTIARLGQRGDGVCDSADGPVFVPYALPGETVRAVRDGERAQLVEIIASSESRIAAICPLFTRCGGCAAQHMEPGLYRAWKRAQLVTALQRAGVAAEVGELVDAHGAGRRRVTFHARREGIGMVVGFMAARSHDLVAVEACPVLAPGLARAPAVAQLLANRLGGSNKPLDIQITASEAGLDVDIRGHGPAGDKLRLSLTEAAERLDLARLSMHGDIIVERRPPIQRMGKAYVAPAPGGFLQATQAGEEAICALVLAGLP-KIRRVADLFSGCGPIAFRLAERAQVVAFESDKAAVLALTRGSGRTQGLKPIASEVRDLFRRPLLEHELDGFDAVVLDPPRAGAEAQIRRLAASKVATIAYVSCDAASFARDAAILIEGGYALAGVTPVDQFRYSAHVELVGLFRRPGK 413          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A126NQR7_9HYPH (RNA methyltransferase n=1 Tax=Bosea sp. PAMC 26642 TaxID=1792307 RepID=A0A126NQR7_9HYPH)

HSP 1 Score: 653 bits (1684), Expect = 7.920e-234
Identity = 332/409 (81.17%), Postives = 363/409 (88.75%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRR 1248
            MN  +S+ RLG RGDGIA+TP G VFVPY LPGET R VRDGER QLVEII PA+SRIA ICPLFTRCGGCAAQHM   LYR WKR+QV T L+RAG+ A +AD+VDAHG GRRRVTFHARREG GM+VGFM ARSHDL+AV ACPVLAPGLARAPA AQL+ANRLGGSNKPLDIQ+TAS+AGLD+DIRGHGPAG+KLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMG+AMVAP PGGFLQAT AGE+ I A V AALP KA++VADLFAGCGP +FRLAE AQV A ESDKAA+LAL RAA TTQGLKPIA++ RDLF+RPLLEHELN FDA++LDPPRAGAEAQ RRLAA+K  TV YVSCDA +FARDAAILIAGGYAL+ VTPVDQFRYSAHIELVG+FRR
Sbjct:    1 MNVAVSIARLGQRGDGIAETPEGQVFVPYTLPGETARIVRDGERGQLVEIIAPADSRIAAICPLFTRCGGCAAQHMEPGLYRTWKRQQVVTALQRAGVEATVADVVDAHGDGRRRVTFHARREGAGMMVGFMAARSHDLIAVEACPVLAPGLARAPAVAQLLANRLGGSNKPLDIQITASDAGLDVDIRGHGPAGDKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGKAMVAPGPGGFLQATTAGEETIAAQVTAALPRKARKVADLFAGCGPFSFRLAETAQVHAFESDKAALLALARAAGTTQGLKPIATETRDLFKRPLLEHELNVFDAIVLDPPRAGAEAQIRRLAASKVATVAYVSCDAATFARDAAILIAGGYALEMVTPVDQFRYSAHIELVGLFRR 409          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A0Q3I875_9HYPH (23S rRNA (Uracil1939-C5)-methyltransferase n=13 Tax=Hyphomicrobiales TaxID=356 RepID=A0A0Q3I875_9HYPH)

HSP 1 Score: 646 bits (1666), Expect = 4.190e-231
Identity = 326/412 (79.13%), Postives = 366/412 (88.83%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAKK 1257
            MNEIL+V RLG RGDGIAQ P+G VF+PYALPGETVRAV DGER QLVEI+ P++SRIA ICPLFTRCGGCAAQHM+  LYREWKR+Q+ T L RAGI AP+AD+VDAHGAGRRRVTFHARR+G  M+VGFM ARSH+L+AV ACPVLAPGL RAP+ A L+ANRLGGS KPLDIQVTASEAGLD+D+RGHGP G+KLRL+LT  AERLDLARLS+HG++VVERRPP Q MG+A+VAPAPGGFLQATAAGE+A+  LV+AALP K KRVADLFAGCGP +FRLAER QVLAVESDKAA+LAL + A  TQGLKPIA++ RDLFRRPLLEHELNGFD V+LDPPRAGAEAQ +RLAAAK   VIYVSCD GSFARDAA L+AGGYAL+GVTPVDQFRYSAH+ELVGVFRR +K
Sbjct:    1 MNEILTVDRLGQRGDGIAQAPSGSVFIPYALPGETVRAVVDGERGQLVEIVAPSQSRIAAICPLFTRCGGCAAQHMAPGLYREWKRQQMVTALSRAGIEAPVADLVDAHGAGRRRVTFHARRQGEAMVVGFMAARSHELIAVEACPVLAPGLDRAPSVALLLANRLGGSAKPLDIQVTASEAGLDVDVRGHGPLGDKLRLALTTLAERLDLARLSIHGDVVVERRPPLQHMGKALVAPAPGGFLQATAAGEEALAGLVMAALP-KGKRVADLFAGCGPFSFRLAERMQVLAVESDKAAMLALAKGAGATQGLKPIATETRDLFRRPLLEHELNGFDVVVLDPPRAGAEAQVKRLAAAKVRDVIYVSCDPGSFARDAATLVAGGYALEGVTPVDQFRYSAHVELVGVFRRGRK 411          
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Match: A0A370KZS9_9HYPH (Class I SAM-dependent RNA methyltransferase n=3 Tax=Bosea TaxID=85413 RepID=A0A370KZS9_9HYPH)

HSP 1 Score: 645 bits (1664), Expect = 8.770e-231
Identity = 327/411 (79.56%), Postives = 367/411 (89.29%), Query Frame = 1
Query:   22 MNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQLVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERAGIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACPVLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGEKLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQATAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDKAAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAGAEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFRYSAHIELVGVFRRAK 1254
            MNE L++ RLG RGDGIA+TP G VFVPYALPGETVRAVRDGERAQLVEI+ PAESR+A ICPLFTRCGGCAAQHM+++ YR+WKR+QV T L RAGI AP+A+IVDAHGAGRRRVTFHAR EG GMLVGFM ARSH L+AV  CPVLAPGL RAPA AQ++ANR+  SNKPLD+Q+TAS+AGLD+DIRGHGPAG+KLRL+LT+ AERLDLARL+MHGEI+VERRPP Q MG+A VAPAPGGFLQATA GE+ I ALV AA+P KAKRVADLFAGCGP +FRLAER QV AVE +KAAIL+L RAA  TQGLKPI+++ RDLFRRPLLEHELNGFDAVILDPPRAGAEAQ +R+AA+K  TV+YVSCD GSFARDAA+LIAGGYAL+GVTPVDQFRYSAHIELVGVFRR K
Sbjct:    1 MNETLTITRLGQRGDGIAETPAGQVFVPYALPGETVRAVRDGERAQLVEILAPAESRVAAICPLFTRCGGCAAQHMADAFYRDWKRQQVVTALARAGIEAPVAEIVDAHGAGRRRVTFHARFEGGGMLVGFMAARSHGLIAVETCPVLAPGLERAPAVAQMLANRMASSNKPLDLQITASDAGLDVDIRGHGPAGDKLRLALTQTAERLDLARLAMHGEIIVERRPPLQLMGKAHVAPAPGGFLQATAEGEERIAALVSAAIP-KAKRVADLFAGCGPFSFRLAERMQVHAVEGEKAAILSLLRAAGATQGLKPISAEQRDLFRRPLLEHELNGFDAVILDPPRAGAEAQVKRIAASKLATVVYVSCDVGSFARDAALLIAGGYALEGVTPVDQFRYSAHIELVGVFRRGK 410          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14347.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B3NFR2_9HYPH4.020e-290100.00tRNA (Uracil-5-)-methyltransferase family protein ... [more]
A0A0Q9IRU6_9HYPH1.200e-26089.56RNA methyltransferase n=3 Tax=unclassified Bosea T... [more]
A0A0N0MCS5_9HYPH1.580e-25086.20RNA methyltransferase n=1 Tax=Bosea vaviloviae Tax... [more]
A0A0N1LB51_9HYPH1.820e-24785.82RNA methyltransferase n=1 Tax=Bosea sp. AAP35 TaxI... [more]
A0A1H5TML8_9HYPH1.780e-24383.0523S rRNA (Uracil1939-C5)-methyltransferase n=2 Tax... [more]
A0A1D7UAI2_9HYPH1.970e-23682.04RNA methyltransferase n=4 Tax=Bosea TaxID=85413 Re... [more]
A0A0Q6KRA3_9HYPH1.420e-23481.40RNA methyltransferase n=2 Tax=Bosea sp. Leaf344 Ta... [more]
A0A126NQR7_9HYPH7.920e-23481.17RNA methyltransferase n=1 Tax=Bosea sp. PAMC 26642... [more]
A0A0Q3I875_9HYPH4.190e-23179.1323S rRNA (Uracil1939-C5)-methyltransferase n=13 Ta... [more]
A0A370KZS9_9HYPH8.770e-23179.56Class I SAM-dependent RNA methyltransferase n=3 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14347contigP-wetherbeei_contig14347:419..1681 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1510531.JQJJ01000009_gene849
Preferred namerumA
PFAMstRNA_U5-meth_tr
Model size1263
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K00557,ko:K03215
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.54e-228
EggNOG OGsCOG2265@1|root,COG2265@2|Bacteria,1MV3A@1224|Proteobacteria,2TR40@28211|Alphaproteobacteria,3JT5J@41294|Bradyrhizobiaceae
EC2.1.1.190,2.1.1.35
DescriptionBelongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
Cds size1254
COG categoryJ
BRITEko00000,ko01000,ko03009,ko03016
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186018.5794709-CDS-P-wetherbeei_contig14347:418..16721683186018.5794709-CDS-P-wetherbeei_contig14347:418..1672Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14347 419..1672 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186018.5918787-UTR-P-wetherbeei_contig14347:1672..16811683186018.5918787-UTR-P-wetherbeei_contig14347:1672..1681Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14347 1673..1681 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14347.1.1prot_P-wetherbeei_contig14347.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14347 419..1672 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14347.1.1

>prot_P-wetherbeei_contig14347.1.1 ID=prot_P-wetherbeei_contig14347.1.1|Name=mRNA_P-wetherbeei_contig14347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=418bp
MTLAMNEILSVGRLGLRGDGIAQTPTGDVFVPYALPGETVRAVRDGERAQ
LVEIITPAESRIAPICPLFTRCGGCAAQHMSESLYREWKRRQVETTLERA
GIAAPIADIVDAHGAGRRRVTFHARREGPGMLVGFMVARSHDLVAVPACP
VLAPGLARAPAAAQLVANRLGGSNKPLDIQVTASEAGLDIDIRGHGPAGE
KLRLSLTEAAERLDLARLSMHGEIVVERRPPQQRMGRAMVAPAPGGFLQA
TAAGEDAIGALVLAALPAKAKRVADLFAGCGPIAFRLAERAQVLAVESDK
AAILALTRAASTTQGLKPIASDVRDLFRRPLLEHELNGFDAVILDPPRAG
AEAQARRLAAAKTPTVIYVSCDAGSFARDAAILIAGGYALDGVTPVDQFR
YSAHIELVGVFRRAKKS*
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mRNA from alignment at P-wetherbeei_contig14347:419..1681-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14347.1.1 ID=mRNA_P-wetherbeei_contig14347.1.1|Name=mRNA_P-wetherbeei_contig14347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1263bp|location=Sequence derived from alignment at P-wetherbeei_contig14347:419..1681- (Phaeothamnion wetherbeei SAG_119_79)
TTGCCCCCGATGACGCTCGCGATGAACGAGATTCTCTCCGTCGGCCGCCT CGGGCTGCGCGGCGACGGCATCGCGCAGACGCCGACGGGCGATGTCTTCG TGCCCTATGCGCTGCCCGGCGAGACGGTGCGCGCGGTGCGCGACGGCGAG CGCGCCCAGCTCGTCGAGATCATCACACCCGCCGAATCGCGCATCGCACC GATCTGCCCGCTCTTCACCCGCTGCGGCGGCTGCGCCGCCCAGCACATGT CGGAGAGCCTGTATCGCGAATGGAAGCGGCGCCAGGTCGAGACCACGCTG GAGCGCGCCGGCATCGCCGCGCCCATCGCGGACATCGTCGACGCGCATGG CGCCGGCCGCCGCCGCGTCACCTTCCATGCGAGGCGCGAGGGCCCCGGCA TGCTCGTCGGCTTCATGGTCGCGCGCAGCCATGATCTGGTCGCCGTGCCG GCCTGCCCGGTGCTGGCGCCGGGGCTGGCCCGCGCGCCGGCCGCGGCCCA GCTCGTCGCCAACCGGCTCGGCGGCTCGAACAAGCCGCTCGACATCCAGG TCACCGCCTCCGAGGCCGGGCTCGACATCGACATTCGCGGCCATGGCCCG GCCGGCGAGAAGCTCAGGCTGTCCCTGACCGAGGCGGCCGAGCGGCTCGA TCTGGCGCGGCTCTCCATGCATGGCGAGATCGTCGTCGAGCGCCGCCCGC CGCAGCAGCGCATGGGCCGCGCGATGGTCGCGCCGGCGCCCGGCGGCTTC CTTCAGGCGACGGCAGCGGGCGAGGACGCGATCGGCGCGCTGGTGCTGGC CGCGCTGCCCGCCAAGGCCAAGCGCGTGGCCGATCTCTTCGCCGGTTGCG GGCCGATCGCCTTCCGCCTCGCTGAGCGGGCGCAGGTGCTGGCCGTCGAG AGCGACAAGGCCGCGATTCTGGCCCTGACGCGGGCCGCCAGCACGACGCA AGGCCTGAAGCCGATCGCCAGCGACGTGCGCGATCTCTTCCGGCGCCCGC TGCTGGAGCACGAGTTGAACGGCTTCGACGCCGTCATCCTCGACCCGCCG CGCGCCGGCGCCGAGGCCCAGGCGCGGCGGCTGGCGGCGGCGAAGACCCC GACCGTGATCTACGTGTCCTGCGACGCGGGGAGCTTCGCGCGCGACGCCG CGATCCTGATCGCGGGCGGATATGCGCTGGACGGTGTGACGCCGGTCGAC CAGTTCCGCTATTCCGCCCATATCGAGCTCGTCGGCGTCTTCCGGCGCGC CAAGAAGAGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14347:419..1681-

>mRNA_P-wetherbeei_contig14347.1.1 ID=mRNA_P-wetherbeei_contig14347.1.1|Name=mRNA_P-wetherbeei_contig14347.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1254bp|location=Sequence derived from alignment at P-wetherbeei_contig14347:419..1681- (Phaeothamnion wetherbeei SAG_119_79)
ATGACGCTCGCGATGAACGAGATTCTCTCCGTCGGCCGCCTCGGGCTGCG
CGGCGACGGCATCGCGCAGACGCCGACGGGCGATGTCTTCGTGCCCTATG
CGCTGCCCGGCGAGACGGTGCGCGCGGTGCGCGACGGCGAGCGCGCCCAG
CTCGTCGAGATCATCACACCCGCCGAATCGCGCATCGCACCGATCTGCCC
GCTCTTCACCCGCTGCGGCGGCTGCGCCGCCCAGCACATGTCGGAGAGCC
TGTATCGCGAATGGAAGCGGCGCCAGGTCGAGACCACGCTGGAGCGCGCC
GGCATCGCCGCGCCCATCGCGGACATCGTCGACGCGCATGGCGCCGGCCG
CCGCCGCGTCACCTTCCATGCGAGGCGCGAGGGCCCCGGCATGCTCGTCG
GCTTCATGGTCGCGCGCAGCCATGATCTGGTCGCCGTGCCGGCCTGCCCG
GTGCTGGCGCCGGGGCTGGCCCGCGCGCCGGCCGCGGCCCAGCTCGTCGC
CAACCGGCTCGGCGGCTCGAACAAGCCGCTCGACATCCAGGTCACCGCCT
CCGAGGCCGGGCTCGACATCGACATTCGCGGCCATGGCCCGGCCGGCGAG
AAGCTCAGGCTGTCCCTGACCGAGGCGGCCGAGCGGCTCGATCTGGCGCG
GCTCTCCATGCATGGCGAGATCGTCGTCGAGCGCCGCCCGCCGCAGCAGC
GCATGGGCCGCGCGATGGTCGCGCCGGCGCCCGGCGGCTTCCTTCAGGCG
ACGGCAGCGGGCGAGGACGCGATCGGCGCGCTGGTGCTGGCCGCGCTGCC
CGCCAAGGCCAAGCGCGTGGCCGATCTCTTCGCCGGTTGCGGGCCGATCG
CCTTCCGCCTCGCTGAGCGGGCGCAGGTGCTGGCCGTCGAGAGCGACAAG
GCCGCGATTCTGGCCCTGACGCGGGCCGCCAGCACGACGCAAGGCCTGAA
GCCGATCGCCAGCGACGTGCGCGATCTCTTCCGGCGCCCGCTGCTGGAGC
ACGAGTTGAACGGCTTCGACGCCGTCATCCTCGACCCGCCGCGCGCCGGC
GCCGAGGCCCAGGCGCGGCGGCTGGCGGCGGCGAAGACCCCGACCGTGAT
CTACGTGTCCTGCGACGCGGGGAGCTTCGCGCGCGACGCCGCGATCCTGA
TCGCGGGCGGATATGCGCTGGACGGTGTGACGCCGGTCGACCAGTTCCGC
TATTCCGCCCATATCGAGCTCGTCGGCGTCTTCCGGCGCGCCAAGAAGAG
CTGA
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