mRNA_P-wetherbeei_contig1432.3.5 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1432.3.5
Unique NamemRNA_P-wetherbeei_contig1432.3.5
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A835YMG4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMG4_9STRA)

HSP 1 Score: 301 bits (771), Expect = 2.290e-97
Identity = 160/295 (54.24%), Postives = 189/295 (64.07%), Query Frame = 3
Query:  417 RPTRVVTDVDDTIKSSGNLRLFN-LPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDI 1298
            R  RVVTD+DDT+KSSGNLRL   +PLGGIDAQY RG+FYPGVFQFGLELA H  PR  MPL +AVLTARA+E LFAL+LD  HPVSVAY +CG  NG++GWGLGP+LYGSVKEWIC  RK+ RK++NF  ++  D   A+ RG                                         +YVFIGDTGEGD  AG  MC + P ++R +F H V C       +P D  VNGVPVLFF+TYVGAA KA   GLL+   + RVIA A  +LE +G PRT+SKW DLE DI
Sbjct:    1 RLLRVVTDIDDTVKSSGNLRLAGVIPLGGIDAQYERGQFYPGVFQFGLELAAHGVPRGLMPLPIAVLTARAKELLFALELDMEHPVSVAYRQCGAENGMEGWGLGPILYGSVKEWICWTRKSRRKVKNFRRLMELDGRNAIARG--------------------------------------YMTEYVFIGDTGEGDFKAGIKMCENFPRELRALFLHMVYCVDD-VCKVPEDYAVNGVPVLFFKTYVGAARKAYEAGLLNRYAVERVIAKAVEELEYSGAPRTSSKWSDLEADI 256          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A835YPL0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPL0_9STRA)

HSP 1 Score: 292 bits (748), Expect = 2.180e-93
Identity = 155/294 (52.72%), Postives = 182/294 (61.90%), Query Frame = 3
Query:  429 VVTDVDDTIKSSGNLRLFNL-PLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
            VVTD+DDT+KSSGNLRL  L PLGGIDAQY RG+FYPGVFQF LELA H  P+  +PL VAVLTARA+EFLFAL+L   HPVS+AY +CG  NG DGWGLGPVLYGSVKEWI   RK  RK +NF  ++  D   A  RG                                          Y+FIGDTGEGD  AG  MC   P ++R +F HAVSC+    +  P D  +NGVPVLFF+TYVGAA KA   GL+D  G++RVI  +  +LE +G PR  SKW D+E DI  A
Sbjct:   38 VVTDIDDTVKSSGNLRLAGLIPLGGIDAQYERGQFYPGVFQFALELAAHGTPQGLLPLPVAVLTARAKEFLFALELKTEHPVSIAYRQCGTDNGFDGWGLGPVLYGSVKEWIVWTRKGRRKFKNFKRLMEIDGTHAAARG--------------------------------------CATDYIFIGDTGEGDTKAGVKMCETFPRELRAMFMHAVSCDSEYCIT-PDDYTINGVPVLFFKTYVGAARKAYEAGLMDKAGVQRVIDRSVMELELSGAPRDCSKWEDMEMDIEQA 292          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: D7G7V3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7V3_ECTSI)

HSP 1 Score: 281 bits (719), Expect = 1.600e-87
Identity = 151/292 (51.71%), Postives = 182/292 (62.33%), Query Frame = 3
Query:  426 RVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGG-GAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDI 1298
            RVVTD+DDT+KSSGN RLF +PLGGIDAQY RG FYPGVFQF LEL+R+R P  + PL VAVLTARAREFLFAL++   H ++  + +CG  NG+  WG GPVLYGSVKEW+C  RK+ RK  NF  +L  D                                      GG G+ +G    Y+FIGDTGEGD  AG+ M  +HP  MR VF H VS     G VP+P D +VN VPV++FRTYVGAAVKA  LGL+D  GL  VI AA+  +    VPR +SKW D+ RD+
Sbjct:   97 RVVTDIDDTVKSSGNKRLFGVPLGGIDAQYRRGVFYPGVFQFSLELSRYRVPSWQEPLSVAVLTARAREFLFALEIGDTHEITREFRQCGERNGIKKWGRGPVLYGSVKEWVCPSRKSERKARNFGFLLEDDEK------------------------------------GGRGRPSGAEGGYIFIGDTGEGDPRAGEIMSAEHPDRMRAVFLHVVSDGPQQGKVPVPMDRVVNAVPVVYFRTYVGAAVKAVELGLMDKKGLENVITAAKEAMTK--VPRQSSKWEDINRDL 350          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A6V2PZW2_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2PZW2_9STRA)

HSP 1 Score: 239 bits (609), Expect = 4.930e-72
Identity = 134/310 (43.23%), Postives = 178/310 (57.42%), Query Frame = 3
Query:  423 TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRC-------------PRDRM-PLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVP-LPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
            T+V++DVDDT+KSSG + +  + LGGID QY RG+FYPGVFQF LEL+ H+                DR+ P +VAVLTARA EF  AL+L G   ++ A+ + G   G++ WGLGPVLYGSV EW+  +RK +RK  NF  ++  D    ++                                           QYV++GDTGE D  AG+ M R++P  ++ VF H VS       P +PP  L+NG P++FFRTYVGAA KA +LGL+ + GL RVI  A A LE  GVPR+  KW+DLERDI++A
Sbjct:   61 TQVISDVDDTLKSSGGVNVAGVALGGIDVQYERGDFYPGVFQFMLELSMHKLGEGPNESEGDDTGEEDRLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIEDWGLGPVLYGSVAEWVIQDRKGLRKFSNFERLIEQDPTGTIM-------------------------------------------QYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVS---DAPFPRIPPPKLINGRPIVFFRTYVGAAAKAVQLGLMYEEGLMRVIVEAEAALE--GVPRSNEKWLDLERDISEA 322          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: W7UBU9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7UBU9_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.430e-70
Identity = 128/279 (45.88%), Postives = 160/279 (57.35%), Query Frame = 3
Query:  417 RPTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAG 1253
            R  +V+TD+DDT+KSSG LRL  + LGGID QY RG++YPG FQF LEL+R   P  R P RVAVLTARAREF FAL+L  +H V   Y   G +NGV+GWG+G VLYGSVKEW+C  RK +RK  NF  +   DR                                              R  YVF+GDTGE DL AG++M R +P+ ++ +F H VS     + P P D  +  VPV++FRTYVGAAVKAA LGLL   G+  V+A    ++E  G
Sbjct:  104 RILQVITDIDDTVKSSGGLRLMGMALGGIDTQYKRGQYYPGAFQFALELSRFGVPEGREPARVAVLTARAREFKFALELKPSHKVCRTYAAAGANNGVEGWGVGTVLYGSVKEWVCQSRKGLRKFRNFEALRAQDRLD--------------------------------------------RTDYVFVGDTGELDLQAGESMIRKYPSRIKALFMHYVS-ESRPSPPPPRDRTLLDVPVIYFRTYVGAAVKAAELGLLGPSGVEAVVARTLEEIEGGG 337          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S2IAS8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IAS8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 5.960e-70
Identity = 134/313 (42.81%), Postives = 177/313 (56.55%), Query Frame = 3
Query:  414 WRP-TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDR-------------MPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVP-LPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
            +RP T+V++DVDDT+KSSG + +  + LGGID QY+RGEFYPGVFQF LEL+      D               P +VAVLTARA EF  AL+L G   ++ A+ + G   G+D WGLGPVLYGSV EW+  +RK +RK  NF  ++  D    ++                                           QYV++GDTGE D  AG+ M R++P  ++ VF H VS       P +PP  L+NG PV+FFRTYVGAA +A +LGL+ + GL RVI  A A L+  GVP +  KW+DLERDI++A
Sbjct:   69 YRPYTQVISDVDDTLKSSGGVTVAGVALGGIDIQYTRGEFYPGVFQFMLELSMPTLDNDDDENDTENEKSQFLYPPKVAVLTARAEEFKVALELKGNSKLAKAFRKTGEKAGIDDWGLGPVLYGSVAEWVIQDRKGMRKFSNFERLIEQDPTGTIM-------------------------------------------QYVYVGDTGELDQEAGETMLREYPEVVKAVFLHVVS---DAPFPRVPPPKLINGRPVVFFRTYVGAAARAVQLGLMQEEGLMRVIVEAEAALK--GVPTSNEKWLDLERDISEA 333          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S4CYL7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CYL7_9EUGL)

HSP 1 Score: 237 bits (604), Expect = 2.030e-69
Identity = 137/298 (45.97%), Postives = 175/298 (58.72%), Query Frame = 3
Query:  420 PTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGA-VPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTA---SKWVDLERDIA 1301
            P +V+TD+DDT+KSSG ++   +PLGGID QY RG FYPGVF+F LELA +       PL VAVLTARAREFLFAL+LD +H +  A+   GR++G + WG+G VLYGSV+EW+C  RK+ RK+ENF  +L +    A  R                                           +VF+GDTGE D  AG+ M  + P+ M+ +F H V+ +      PLP D L+NG PV+FFRTYVGAA KA + GLL   GL  V+ AARADLE    P +A   S+W DL RDIA
Sbjct:  214 PLQVITDIDDTVKSSGGVKFGGIPLGGIDTQYRRGLFYPGVFRFMLELASY--ATTEAPLSVAVLTARAREFLFALELDESHAICKAFRDTGRASGHEDWGIGEVLYGSVQEWVCQGRKSWRKVENFKLLLSSLPPDAARR-------------------------------------------FVFVGDTGELDQEAGEIMLEEFPSCMQALFLHVVAPDPALVPAPLPRDKLINGAPVVFFRTYVGAARKAVKYGLLGVDGLAAVVEAARADLERIE-PESAGGSSRWADLNRDIA 465          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S3A3W7_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A3W7_9RHOD)

HSP 1 Score: 231 bits (588), Expect = 2.270e-68
Identity = 134/306 (43.79%), Postives = 175/306 (57.19%), Query Frame = 3
Query:  396 RRPQTGWRPTR--VVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAV-SCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIAD 1304
            + P    +P R  V+TD+DDT+KSSG LR+    LGGID+QY RG+ YPGVFQF LE+A    P D  PL +AVLTARARE  FAL L+  HP+   Y  CG   G D WG+GPVLYGSVKEW+   +K +RK  NF ++L    A                                  S+ GVG   G + +Y+++GDTGE DL AG+ M + +P++M+ VF H V +     A+    D+ V  VPVLFFRTYVGAA KA   G++ +  +RRV A A  +L       ++SKWVDL +DI D
Sbjct:   92 KEPPAPSKPERIQVITDIDDTVKSSGGLRVAGQYLGGIDSQYKRGDCYPGVFQFALEIATSGLPEDVEPLPMAVLTARARELKFALALEEHHPICRKYRYCGMERGFDDWGIGPVLYGSVKEWLFQSKKGVRKFRNF-QLLHNYNA----------------------------------SNCGVG--IGCQTKYIYVGDTGELDLHAGKLMLQKYPSEMKAVFLHVVYNERDDPALKSYEDTHVKNVPVLFFRTYVGAARKAVEHGIISEAAMRRVAAKALKELLRIEPDHSSSKWVDLRKDIKD 360          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: B8C091_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C091_THAPS)

HSP 1 Score: 222 bits (566), Expect = 2.010e-65
Identity = 127/322 (39.44%), Postives = 175/322 (54.35%), Query Frame = 3
Query:  423 TRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRM-------------------PLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGV---DGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGA-----VPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
            T+VV+D+DDT+KSSG + +  + LGGID QY+RGEFYPGVFQF  EL+ +    ++                    P +VAVLTARA EF  AL++     ++ A+ + G S+ V     WG+GPVLYGSV EWI   +K +RK  NF  +L  D    ++                                           QY+++GDTGE D  AG+ M R++P  ++ VF H VS +   A     +P+PP  L+NG P++FFRTYVGAA KA +LGL++  GL RV+  A  +LE  GVP+   KW+DLERDI +A
Sbjct:   60 TQVVSDIDDTLKSSGGVTIAGVSLGGIDVQYARGEFYPGVFQFMWELSLYSITLNQQYYDDFTSEEDDSSLLQGLTPPKVAVLTARAEEFKAALEIKDESKLAQAFLKTGESSEVCPTKNWGVGPVLYGSVNEWIVQYKKGLRKFNNFERLLEQDPTGRIL-------------------------------------------QYIYVGDTGELDQEAGETMLREYPEVVQAVFLHVVSFDSPSAYPSSGLPIPPSKLINGRPLVFFRTYVGAAAKATQLGLMEGDGLMRVMEKAEKELEERGVPKDDVKWIDLERDIYEA 338          
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Match: A0A7S0UKK8_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UKK8_9STRA)

HSP 1 Score: 221 bits (562), Expect = 2.600e-65
Identity = 119/297 (40.07%), Postives = 165/297 (55.56%), Query Frame = 3
Query:  417 RPTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGLELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNGVDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGGGDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDLVAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYVGAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA 1307
            R T+V++DVDDT+KSSG + +  + LGGID QY RG+FYPGV +F L L++     +  P  +A+LTARA EF  AL++     ++VA    G   G++GWG+GPVLYGSV EWI  +RK +RK  NF  ++  D    +                                            QY+++GDTGE D  AG+ M R++P  M+ VF H V+ +  G   +PP  L+NG PV+FFRTYVGAA+ A +LGL+   GL+ VI AA   L    VP  + KW D+ +D+A A
Sbjct:   52 RFTQVISDVDDTLKSSGGVSVGGVALGGIDVQYDRGDFYPGVGEFMLALSQCGLTEEVNPANIAILTARAEEFKAALEIKEGSKLAVALRSAGEKVGINGWGVGPVLYGSVAEWIAQDRKGLRKFTNFERLIEQDPTGTIF-------------------------------------------QYIYVGDTGELDQEAGETMLREYPEVMKAVFLHVVTDDVEGPPLIPPPKLINGHPVIFFRTYVGAAIDAVQLGLMSLDGLQSVIEAATEKLS--DVPENSDKWKDIRKDMARA 303          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1432.3.5 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMG4_9STRA2.290e-9754.24Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835YPL0_9STRA2.180e-9352.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G7V3_ECTSI1.600e-8751.71Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V2PZW2_9STRA4.930e-7243.23Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
W7UBU9_9STRA1.430e-7045.88Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2IAS8_9STRA5.960e-7042.81Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S4CYL7_9EUGL2.030e-6945.97Hypothetical protein n=1 Tax=Eutreptiella gymnasti... [more]
A0A7S3A3W7_9RHOD2.270e-6843.79Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
B8C091_THAPS2.010e-6539.44Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S0UKK8_9STRA2.600e-6540.07Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1432contigP-wetherbeei_contig1432:1470..3600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G7V3
Model size1312
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorymitochondrion
Exons5
Evalue1.61e-89
EggNOG OGs2AJYC@1|root,2RZ89@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-06_000190.1
Cds size1053
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1432.3.5prot_P-wetherbeei_contig1432.3.5Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1432 1470..3177 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.6930737-CDS-P-wetherbeei_contig1432:1469..16321683186017.6930737-CDS-P-wetherbeei_contig1432:1469..1632Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1432 1470..1632 -
1683186017.7129462-CDS-P-wetherbeei_contig1432:1859..24231683186017.7129462-CDS-P-wetherbeei_contig1432:1859..2423Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1432 1860..2423 -
1683186017.726195-CDS-P-wetherbeei_contig1432:2663..27291683186017.726195-CDS-P-wetherbeei_contig1432:2663..2729Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1432 2664..2729 -
1683186017.744646-CDS-P-wetherbeei_contig1432:2917..31771683186017.744646-CDS-P-wetherbeei_contig1432:2917..3177Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1432 2918..3177 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.7555811-UTR-P-wetherbeei_contig1432:3177..33621683186017.7555811-UTR-P-wetherbeei_contig1432:3177..3362Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1432 3178..3362 -
1683186017.7636704-UTR-P-wetherbeei_contig1432:3528..36001683186017.7636704-UTR-P-wetherbeei_contig1432:3528..3600Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1432 3529..3600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1432.3.5

>prot_P-wetherbeei_contig1432.3.5 ID=prot_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=351bp
MVTARRCAVLMAAASRHGSILPIASASFTRFSKLAAASSASSPQLLRRPQ
TGWRPTRVVTDVDDTIKSSGNLRLFNLPLGGIDAQYSRGEFYPGVFQFGL
ELARHRCPRDRMPLRVAVLTARAREFLFALKLDGAHPVSVAYERCGRSNG
VDGWGLGPVLYGSVKEWICSERKAIRKLENFNEILRADRATALVRGGGGG
GDANGRFGALAGSLHASAGVGGAGSDGGVGKSAGPRPQYVFIGDTGEGDL
VAGQNMCRDHPADMRGVFFHAVSCNGGGAVPLPPDSLVNGVPVLFFRTYV
GAAVKAARLGLLDDCGLRRVIAAARADLEAAGVPRTASKWVDLERDIADA
R
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mRNA from alignment at P-wetherbeei_contig1432:1470..3600-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1432.3.5 ID=mRNA_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2131bp|location=Sequence derived from alignment at P-wetherbeei_contig1432:1470..3600- (Phaeothamnion wetherbeei SAG_119_79)
CCGGAACTCTTCTGTAAGTGGGATAGCAGGGGCAAAGCCAAATGCAGTGA AATCGTGTAGCTATTCGACAAGGTGTGTAGTCTTTCTGTGTTTTTCTCTT TTTGGTTTTGACGGCACCCACTTGTCCCGTCTTCTGCACGCTAAATCAAC CAACACGTTATCCCTCCTGCCCCACTTTCGTTGATTGCCGTTTGCTTCTC TTCATCGCCTCCGTTCTTCCGCTCTCCTCTTTCTTCAGTGTGCGACAGGT TTCGCTCGTGATCTCGTTGCTTTTTTAGGTCCCGTTTTGTGCGCATTGTC AACCCACTAAAACCCAATCCCTTTCGTGTCTCGATTGTGCGGAACAACCT TCGGGCCATTCTTCCTTTGCAAAAAACGCAACTGGGCAACAATGCAGGTG GACGTGTCGAAAGGCTGTGTTGTATGGTCACTGCCAGGCGATGCGCGGTG CTGATGGCGGCTGCAAGCCGTCATGGCAGCATCCTCCCTATCGCGAGCGC TTCGTTCACTAGGTTTTCGAAGCTTGCTGCGGCGTCGTCAGCATCTTCGC CGCAACTACTGCGCCGCCCTCAAACCGGGTGGCGACCAACTCGTGTGGTG ACCGACGTTGACGATACCATCAAAAGTAGTGGAAACCTCAGGCTCTTTAA CTTGCCTTTAGGTGGCATTGACGCACAATACAGGTGTCCGCAAAGATGCA TCTTTGATTCCCTTGCTCGTTGCAACGCAGTGAGCCACAGATGCAAGAAA CAGTACCCTTGCCAATTCTATGAGATCTGTTCCTTCTAAAGATTGCAACA AACCAAACCCTGGCTTACCTGCCTTGTTGCTTTCACTTCCTCCTTCGCTC TTGGCAATGTCTCGACGGCAGCCGGGGAGAGTTCTACCCAGGTGTTTTTC AGTTTGGTCTGGAACTCGCCAGGCACAGATGTCCCAGGTACGACGATTTC GCGCAATGCTCTGTCGTTGTGCGTTGGCGTGAGTTAAGCCGTCAGTCTCT CAGCGTGCTCCAAGCCCCCTGTGGTTAGACAGGAGAAAGCTGACAGAATT GCAAATCTCGTAGGTTTTCCCATATAGAACGCCTCGCTCTCTTTCGCAGC CGGCTCCAATCTTCCCCGCGTTTCCACCCACTTTCAAATCCCCTTCCCGC CTCCCGCCACTGACCGACCTGCCGCAGGGACAGGATGCCGCTGCGCGTGG CTGTGCTGACCGCGCGCGCCCGCGAGTTCCTTTTCGCCCTCAAACTCGAC GGCGCCCACCCGGTCAGCGTGGCCTACGAGCGCTGCGGCCGCAGCAACGG CGTCGACGGCTGGGGCCTCGGCCCCGTTCTCTACGGCAGCGTCAAGGAGT GGATCTGCTCGGAGCGCAAGGCGATCCGCAAGCTCGAAAACTTTAACGAG ATCTTGCGGGCCGACCGTGCAACCGCCCTCGTCCGAGGCGGCGGCGGCGG CGGCGACGCCAACGGGCGCTTTGGTGCTTTGGCTGGCAGCCTGCATGCCT CTGCTGGCGTTGGGGGCGCTGGCAGCGATGGCGGCGTGGGGAAATCGGCG GGGCCGCGGCCGCAGTACGTCTTCATCGGGGACACGGGCGAGGGCGACCT GGTAGCGGGGCAGAACATGTGCAGGGACCATCCCGCAGACATGCGCGGCG TGTTCTTTCACGCAGTCAGCTGCAACGGCGGCGGCGCCGTCCCGCTGCCG CCCGACAGCCTCGTCAACGGCGTTCCCGTCCTCTTCTTTCGGTGAGCGCG TTTTTCACGTCAGGTCAGAGGCATGTCTTATCATTATCTTTCTTCGGCTA GGATACCTCTACTCTGCGCAGCGTGGCAGATTGATCGTAGCAAGGAAACA GGAGCGAAGACCTTCGAAGGCTTCGTTTGCTCTATTGGGCTCTTATTTGC TTGGCGGTAATGGCTCGCAACCTCCTCCGGGATGCTTTTTAAACGCGACC CTCCCTTCTCTTCCTCAGAACCTACGTGGGCGCCGCGGTCAAGGCCGCGC GGCTGGGCCTGCTCGACGACTGTGGGCTGCGGCGCGTCATCGCCGCCGCC AGGGCCGACCTCGAAGCCGCCGGCGTGCCGCGAACCGCCAGCAAGTGGGT GGATCTCGAGCGGGACATTGCAGACGCCCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1432:1470..3600-

>mRNA_P-wetherbeei_contig1432.3.5 ID=mRNA_P-wetherbeei_contig1432.3.5|Name=mRNA_P-wetherbeei_contig1432.3.5|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1053bp|location=Sequence derived from alignment at P-wetherbeei_contig1432:1470..3600- (Phaeothamnion wetherbeei SAG_119_79)
ATGGTCACTGCCAGGCGATGCGCGGTGCTGATGGCGGCTGCAAGCCGTCA
TGGCAGCATCCTCCCTATCGCGAGCGCTTCGTTCACTAGGTTTTCGAAGC
TTGCTGCGGCGTCGTCAGCATCTTCGCCGCAACTACTGCGCCGCCCTCAA
ACCGGGTGGCGACCAACTCGTGTGGTGACCGACGTTGACGATACCATCAA
AAGTAGTGGAAACCTCAGGCTCTTTAACTTGCCTTTAGGTGGCATTGACG
CACAATACAGCCGGGGAGAGTTCTACCCAGGTGTTTTTCAGTTTGGTCTG
GAACTCGCCAGGCACAGATGTCCCAGGGACAGGATGCCGCTGCGCGTGGC
TGTGCTGACCGCGCGCGCCCGCGAGTTCCTTTTCGCCCTCAAACTCGACG
GCGCCCACCCGGTCAGCGTGGCCTACGAGCGCTGCGGCCGCAGCAACGGC
GTCGACGGCTGGGGCCTCGGCCCCGTTCTCTACGGCAGCGTCAAGGAGTG
GATCTGCTCGGAGCGCAAGGCGATCCGCAAGCTCGAAAACTTTAACGAGA
TCTTGCGGGCCGACCGTGCAACCGCCCTCGTCCGAGGCGGCGGCGGCGGC
GGCGACGCCAACGGGCGCTTTGGTGCTTTGGCTGGCAGCCTGCATGCCTC
TGCTGGCGTTGGGGGCGCTGGCAGCGATGGCGGCGTGGGGAAATCGGCGG
GGCCGCGGCCGCAGTACGTCTTCATCGGGGACACGGGCGAGGGCGACCTG
GTAGCGGGGCAGAACATGTGCAGGGACCATCCCGCAGACATGCGCGGCGT
GTTCTTTCACGCAGTCAGCTGCAACGGCGGCGGCGCCGTCCCGCTGCCGC
CCGACAGCCTCGTCAACGGCGTTCCCGTCCTCTTCTTTCGAACCTACGTG
GGCGCCGCGGTCAAGGCCGCGCGGCTGGGCCTGCTCGACGACTGTGGGCT
GCGGCGCGTCATCGCCGCCGCCAGGGCCGACCTCGAAGCCGCCGGCGTGC
CGCGAACCGCCAGCAAGTGGGTGGATCTCGAGCGGGACATTGCAGACGCC
CGG
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