mRNA_P-wetherbeei_contig1430.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A835YHG1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHG1_9STRA) HSP 1 Score: 120 bits (301), Expect = 1.410e-30 Identity = 66/124 (53.23%), Postives = 87/124 (70.16%), Query Frame = 3
Query: 282 VLRAKEEESGEASTTETEVIATEKPKSAS----PADLGLDSRGVVSSDKGSIEAYPIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEEDE 641
+LRA+ + A+ ++ +A EK + P D+ L + + + D+ ++YPID PAY LL LSTVVAIAFVG IFE P+P+LGYVPTY +G LSLPGF+FLFYAAIKKGQAE+EED+
Sbjct: 9 LLRAESGDEDAAAASQPVSVAEEKKEETKQEVVPMDMSLPTINLDAKDQD--KSYPIDFPAYGLLSLSTVVAIAFVGSIFEVAGPSPLLGYVPTYIIGALSLPGFIFLFYAAIKKGQAEAEEDD 130
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: D8LJZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJZ9_ECTSI) HSP 1 Score: 93.2 bits (230), Expect = 2.000e-19 Identity = 57/111 (51.35%), Postives = 68/111 (61.26%), Query Frame = 3
Query: 348 EKPKSASPADLGLDSRGVVSSDKGSIEA-------------YPIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEEDE 641
E KSA P DL S G++ G+ +A YPI LP+Y LL L+TVV+IAF G IFE P LGY TY +G LSLP F+FLFYAAIKKG+AE EED+
Sbjct: 77 EPAKSAVPEDLDYYS-GLIGEQPGADKAPASGKEEAVTTSDYPIPLPSYLLLVLATVVSIAFTGSIFEVTGGHPELGYTATYIIGTLSLPTFIFLFYAAIKKGKAEVEEDD 186
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S1EUA5_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1EUA5_9RHOD) HSP 1 Score: 72.8 bits (177), Expect = 1.850e-12 Identity = 38/67 (56.72%), Postives = 48/67 (71.64%), Query Frame = 3
Query: 435 PIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEE 635
PI+LP+Y LL S+ +AIA +GCIFE S TP G T A+ + S P F FLFYAA++KG+AESEE
Sbjct: 64 PINLPSYVLLLSSSFLAIASIGCIFELASGTPQYGTTTTSAILLFSFPSFAFLFYAALQKGKAESEE 130
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S2P364_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P364_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 5.390e-12 Identity = 40/90 (44.44%), Postives = 57/90 (63.33%), Query Frame = 3
Query: 411 DKGSIEAYPIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEEDEGY*GDFPSTPKSL 680
++ ++AYPIDLP+ LL S V+AI+ +G +FE TP LG+ T A+ L LP +FL YAAI KG AE+EE + +F + P+ L
Sbjct: 34 EEEELQAYPIDLPSPILLATSMVLAISSIGSLFELAGGTPKLGFAVTAAITALGLPISVFLIYAAILKGSAETEEADR---EFMNKPRRL 120
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S2XVJ4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVJ4_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.120e-11 Identity = 38/77 (49.35%), Postives = 53/77 (68.83%), Query Frame = 3
Query: 411 DKGSIEAYP-IDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEED 638
++G + P + LPAY L +S VVAIAF+G IFE P+LG+ T+A+ V S PGFL+LFY ++K+GQ E +ED
Sbjct: 115 EEGGLPMIPMLPLPAYLYLVVSCVVAIAFIGTIFEVSGGKPLLGFPLTWAIMVASGPGFLYLFYCSLKRGQIEEKED 191
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S0BKC5_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BKC5_9RHOD) HSP 1 Score: 70.5 bits (171), Expect = 1.150e-11 Identity = 38/78 (48.72%), Postives = 53/78 (67.95%), Query Frame = 3
Query: 402 VSSDKGSIEAYPIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEE 635
+S D GS P++LP+ ALLGL++++AI+ +GCIFE S P G T + S PGFLF +YAAIKKGQ E+++
Sbjct: 48 LSMDSGSSPP-PVNLPSSALLGLASILAISTIGCIFEISSGQPQYGTPITVGILAFSAPGFLFSYYAAIKKGQYEADQ 124
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S4JDB9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JDB9_9STRA) HSP 1 Score: 68.6 bits (166), Expect = 1.470e-10 Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 3
Query: 432 YPIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEEDE 641
YP+++P+ LLG S ++AIA +G IFE P G PT A+ + LP LFLFYAAI KG AE+EED+
Sbjct: 90 YPLNVPSPLLLGSSMILAIASIGSIFELSGGNPSNGVGPTAAIAAIGLPTCLFLFYAAIMKGIAETEEDD 159
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A2V3IZS2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZS2_9FLOR) HSP 1 Score: 67.4 bits (163), Expect = 1.640e-10 Identity = 36/68 (52.94%), Postives = 46/68 (67.65%), Query Frame = 3
Query: 435 PIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEED 638
PI+ P+ LL S+V+AIA +GC+FE P G+ T + +SLP FLFLFYAAIKKGQ E+ ED
Sbjct: 58 PINAPSGVLLLSSSVLAIAAIGCVFELTGGHPTYGFNVTAGILTVSLPSFLFLFYAAIKKGQIEALED 125
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: A0A7S2C8R0_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C8R0_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 1.330e-9 Identity = 36/69 (52.17%), Postives = 46/69 (66.67%), Query Frame = 3
Query: 444 LPAYALLGLSTVVAIAFVGCIFEAF---SPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAESEEDE 641
+P+Y LG S ++AIAFVGCIF+ F P P G T + V S P ++FLF AAIKKGQ E+EED+
Sbjct: 107 VPSYGFLGSSVLLAIAFVGCIFQLFYDKPPAPYFGVPITSIIFVFSGPTWIFLFIAAIKKGQKEAEEDD 175
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Match: M2XU10_GALSU (Uncharacterized protein n=2 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XU10_GALSU) HSP 1 Score: 65.1 bits (157), Expect = 2.010e-9 Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 3
Query: 435 PIDLPAYALLGLSTVVAIAFVGCIFEAFSPTPVLGYVPTYAVGVLSLPGFLFLFYAAIKKGQAES 629
P+++P+ LLG+S V+AIAFVG IFE S P G T + V SLP FLFLFYAAI+KG+ ES
Sbjct: 81 PLNVPSGILLGVSCVLAIAFVGSIFELSSGHPQYGRELTSVILVSSLPSFLFLFYAAIQKGKDES 145 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1430.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1430.2.1 >prot_P-wetherbeei_contig1430.2.1 ID=prot_P-wetherbeei_contig1430.2.1|Name=mRNA_P-wetherbeei_contig1430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=171bp MQPLTAILFLVAAAVGMSLRVAPLANCRARLCRPRAAVGSFLGRPQRLVLback to top mRNA from alignment at P-wetherbeei_contig1430:5604..6593- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1430.2.1 ID=mRNA_P-wetherbeei_contig1430.2.1|Name=mRNA_P-wetherbeei_contig1430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=990bp|location=Sequence derived from alignment at P-wetherbeei_contig1430:5604..6593- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1430:5604..6593- >mRNA_P-wetherbeei_contig1430.2.1 ID=mRNA_P-wetherbeei_contig1430.2.1|Name=mRNA_P-wetherbeei_contig1430.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig1430:5604..6593- (Phaeothamnion wetherbeei SAG_119_79)back to top |