mRNA_P-wetherbeei_contig1430.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1430.1.1
Unique NamemRNA_P-wetherbeei_contig1430.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A835Z7Y9_9STRA (AhpC/TSA antioxidant enzyme-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Y9_9STRA)

HSP 1 Score: 337 bits (863), Expect = 1.380e-111
Identity = 172/273 (63.00%), Postives = 211/273 (77.29%), Query Frame = 2
Query:  299 KGRLSAQTARASSPRYSRMAVTTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDVVGAR 1117
            +G L   T  +SS   SR   +   A  +L +V+V SAATG+ +PLT+AW  + +G+KT+V+FLTHFADFN+WE AQKLRH LPAIDDAG +V+AVG+G++  AK FA+ T FPL  LYVDE+  AY  L F++GFQP     +KVNPYL+LLPMLAGIGSPGTIQAVLRGY GDR A+A WV +TLQ+V+K  FDVLGT GARP EVATVRLQNM EI+ +WD LSPPNKELIT QGGTL+FDG EV+Y+Y D+GILTY  VD ++  VGA+
Sbjct:   34 RGALRLLTVASSSTVSSRTGAS-ETAFDVLSEVNVLSAATGQPLPLTQAWKAK-KGKKTVVAFLTHFADFNAWEYAQKLRHYLPAIDDAGAEVIAVGLGTVAAAKEFASLTNFPLQRLYVDETGRAYEELGFSKGFQPP----VKVNPYLKLLPMLAGIGSPGTIQAVLRGYVGDRDADASWVESTLQLVEKRRFDVLGTQGARPFEVATVRLQNMREIVTRWDDLSPPNKELITWQGGTLIFDGKEVVYQYNDRGILTYTPVDEVLREVGAK 300          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: D7G2X3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2X3_ECTSI)

HSP 1 Score: 312 bits (800), Expect = 1.560e-102
Identity = 153/252 (60.71%), Postives = 194/252 (76.98%), Query Frame = 2
Query:  362 TTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDVVGAR 1117
            TT D  +LL  VSV SA++G+ M L  AW+  P G+KTIV+F TH ADFNSWE AQKLRH LP IDDAG  VV V +G++  A+ F A TGFPL ++++D +  AYSAL F+ GF+P+LPG  K+NPYLRLLPMLAGIGSPGTIQAVL+GY GD ++NA+WV + L +VD   FD LGT G+RPLEVAT+RLQNM +I+ KW+ L+PP+KELITQQGGT+VF+G + IY Y+DKGIL Y DV  ++  +G +
Sbjct:   17 TTSDEYELLRGVSVKSASSGKEMDLLSAWEPAP-GKKTIVAFFTHTADFNSWEYAQKLRHYLPQIDDAGVGVVGVSLGTVDAARDFCAETGFPLDNMFMDATGQAYSALGFSNGFEPRLPGDRKINPYLRLLPMLAGIGSPGTIQAVLKGYVGDPNSNADWVSSALSMVDNKEFDFLGTRGSRPLEVATLRLQNMRQIVTKWNKLAPPDKELITQQGGTVVFEGRDKIYNYKDKGILVYTDVLEMLKTIGVK 267          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: W7TVS2_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVS2_9STRA)

HSP 1 Score: 270 bits (691), Expect = 2.150e-85
Identity = 157/287 (54.70%), Postives = 194/287 (67.60%), Query Frame = 2
Query:  293 GPKGRLSAQTAR----ASSPRYSRMAVTTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEK-TIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATG-FPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQ-----IVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDVVGARR 1120
            G  GRLS Q++      SSP Y+           LL++ +V SA TG S+ L    D+ P G K TIV+FLTH+ DFNS+E AQKL H LP ++ A   VVAVGIG++  A+ FA+  G FPL  LY DESA +Y    F++GF   LP    VNPYL+LLPMLAGIGSPGT+QAVL GY GD+ A+A W G  L+     +VDKSAFDVLG +GARP EVATVRLQNM  IL  W+ L PPNK+LITQQGG+LVF+G +++  YRD+GILTY DV+ L+  VG  R
Sbjct:   45 GGHGRLSMQSSSFSIMQSSPEYA-----------LLKESNVLSAKTGRSVALG---DVFPTGGKMTIVAFLTHWGDFNSFEYAQKLLHYLPELERANVNVVAVGIGTVAAAQKFASLVGGFPLDRLYADESAASYGKFGFSRGFAADLP----VNPYLKLLPMLAGIGSPGTLQAVLAGYVGDKKADASWTGDYLKKEGQGLVDKSAFDVLGREGARPFEVATVRLQNMMAILPNWEALVPPNKQLITQQGGSLVFEGRKLVRVYRDRGILTYTDVEDLLRTVGMAR 313          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A7S0VR42_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VR42_9CRYP)

HSP 1 Score: 233 bits (595), Expect = 1.270e-70
Identity = 141/314 (44.90%), Postives = 181/314 (57.64%), Query Frame = 2
Query:  197 LPTMTRQQRFLVARIAVVV-ALFHCASAFVQ----HHGPKGRLSAQTARASSPRYSRMAVTTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGF---QPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQ--------IVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVD 1090
            +PTM R  R   A  A+++ AL     AF+      H PK  + A + R  +P  +R+ +       LL  V V S ++G++MPLTKAW+    G K++V  LTH+ D   WE AQKLR+ LP + + G +V  VGIG    AK FA + G P   LY D  A+   AL  + GF     + P     +PYLRLLPML G+GSPGTI  V  GY GDRSAN EW+   L+         VD S FD+LG    RP E+ATVRLQNM  +L +WD L+P NK+L+ QQGGTLVFDG E  Y Y DKGIL Y  ++
Sbjct:   25 VPTMARSSRSSYALSALILLALCAAGDAFLSPPSISHLPKRGVVAASGRRGAPA-ARLRMGAE--YDLLSGVDVVSVSSGQNMPLTKAWN--KNGGKSLVVLLTHWGDLTCWEYAQKLRYFLPTLKEKGVQVTLVGIGGQEAAKEFAESNGIPTDILYTDGDASCAGALGLSPGFGRDSAQQPQANAASPYLRLLPMLLGVGSPGTIGKVAYGYFGDRSANPEWIPEQLRRTQTGSFPYVDPSTFDLLGDGYLRPFELATVRLQNMISVLSRWDALTPDNKDLVVQQGGTLVFDGEECAYRYDDKGILVYAPLE 333          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A7S0TSY5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0TSY5_HEMAN)

HSP 1 Score: 226 bits (575), Expect = 6.150e-68
Identity = 121/250 (48.40%), Postives = 155/250 (62.00%), Query Frame = 2
Query:  383 LLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGF---QPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQ--------IVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLM 1099
            LL  V V S A+GESMP+TKAW+    G K++V  LTH+ D   WE AQKLR++LP + + G +V  VGIG    AK FA + G P   LY D +A    AL  + GF    P+ P     +PYLRLLPML G+GSPGT+  V+ GY GDRS+N +W+   L+         VD + FD LG    RP E+ATVRLQNM  +L +W+ L P NK+LI QQGGTLVFDG +  Y Y DKGIL Y  ++ ++
Sbjct:   65 LLSGVDVVSVASGESMPVTKAWN--KNGGKSLVVLLTHWGDLTCWEYAQKLRYSLPELQEKGVQVTLVGIGGQEAAKEFAESNGIPTTMLYTDSNAACAGALGLSPGFGRDTPQQPQANDASPYLRLLPMLLGVGSPGTLGRVIYGYFGDRSSNPKWIPEQLKRTQTGRFPYVDPATFDALGDGYLRPFELATVRLQNMISVLSRWEQLIPDNKDLIVQQGGTLVFDGEDCTYRYDDKGILVYAPLEEVL 312          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A699YK20_HAELA (Uncharacterized protein n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YK20_HAELA)

HSP 1 Score: 224 bits (572), Expect = 2.260e-67
Identity = 119/242 (49.17%), Postives = 158/242 (65.29%), Query Frame = 2
Query:  386 LEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSA-FDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDVV 1108
            L D++V+ A +GE + L   W  RP G K ++ FLTHFAD  SWE AQKL   +P ++ +G +V+AVG+GS   A+ FA    FP   L+ D S  AY AL F  GF P L     ++PY +LLPMLAG+GS GT+Q V+RGY GDR+A          + D++  FD+LGT   RP E+AT+RL NM  +L +W+VLSPPN+ L+TQQGGTL FDG EVI+++ D GIL Y D + L+ VV
Sbjct:   80 LRDLTVYRAGSGEPVELLSLWQARP-GSKVVMPFLTHFADLTSWEYAQKLVKIMPMLEASGVQVIAVGLGSAANAQEFARDLRFPATKLFADPSGAAYKALGFNPGFLPDLD----ISPYAKLLPMLAGVGSEGTLQEVVRGYIGDRAAQP--------VFDRATPFDILGTGYQRPFELATLRLFNMVGVLSRWNVLSPPNQALLTQQGGTLAFDGQEVIFKHVDSGILKYTDTEALLRVV 308          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A1Y1I630_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I630_KLENI)

HSP 1 Score: 223 bits (567), Expect = 2.540e-66
Identity = 117/238 (49.16%), Postives = 155/238 (65.13%), Query Frame = 2
Query:  386 LEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLM 1099
            L+ V V  AA+G+ + L   W  +P G + ++ F+THFAD +SWE AQKL   LP +   G ++VAVG+GS   A+ FA   GFPL  LY D +   Y ALNF+ GF P+      V+PYL+LLPML GIGSPGTIQ V RGY GDR +   + G+T        FD+LG    RP+E+AT+RL NM  IL+KW  +SPP   L+TQQGG++VFDG +V++++ D GIL Y DVD L+
Sbjct:  112 LKGVQVLEAASGQPVELLSLWAAKP-GVRVVIPFMTHFADLSSWEFAQKLAKKLPELQANGVRIVAVGLGSPDNARRFAETVGFPLQLLYADPTGACYRALNFSPGFAPEAG----VSPYLKLLPMLMGIGSPGTIQEVARGYFGDRGSKPVFEGST-------PFDILGKGYQRPMELATLRLFNMFGILQKWGEMSPPETRLLTQQGGSIVFDGEDVVFKHVDSGILKYTDVDALV 337          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A383VHC5_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VHC5_TETOB)

HSP 1 Score: 221 bits (562), Expect = 2.900e-66
Identity = 120/248 (48.39%), Postives = 156/248 (62.90%), Query Frame = 2
Query:  380 QLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHN-LPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDVVGARR 1120
            + L+ V VFSAA G  + L   W   P   + ++ FLTHFAD +SWE AQKL    LP + + G +V+ VG+GS   A+ F++   FPL  LY D +  AYSAL F+ GF P       +NPY++LLPMLAGIGSPGT+Q V+RGY GDRSA   +   T        FD+LG +  RP E+AT+RL NM  IL KW  LSPP+ +L+ QQGG+LVF G +VI+ + D GIL Y D+D LM  + A R
Sbjct:   38 EALKGVKVFSAADGFEVELLSLWQPGP-DTRVVIPFLTHFADLSSWEYAQKLNQKVLPQLREQGLQVITVGLGSPENARLFSSTLDFPLEGLYADPTGAAYSALGFSPGFAPGAD----INPYMKLLPMLAGIGSPGTLQEVIRGYVGDRSAKPVFNSAT-------PFDILGQNYQRPFELATLRLFNMIGILPKWGELSPPDTKLLVQQGGSLVFKGTDVIFRHNDSGILKYTDIDALMAAIDASR 273          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A250XFY5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XFY5_9CHLO)

HSP 1 Score: 220 bits (561), Expect = 3.210e-66
Identity = 118/238 (49.58%), Postives = 149/238 (62.61%), Query Frame = 2
Query:  386 LEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLM 1099
            L+ +SV  A T E + L   W   P G K  + FLTHFAD +SWE AQKL   LP ++D+G KV  VGIGS   A+ F+ A  FP   LY D  A AY AL F+ GF P L    +++PY +L+ M AGIGSPGT+Q V RGY GD+S+   + G T        FDVLGT   RP+E+AT+RL NM  IL KW  LSPP++ L+ QQGGT+V DG E I+ + D GIL Y D+D L+
Sbjct:   44 LKGISVVKANTNERVELLSLWQAEP-GTKVAIPFLTHFADLSSWEYAQKLVKVLPTLEDSGVKVFVVGIGSAANAQEFSRALKFPSDRLYADPEATAYKALGFSPGFAPGL----EISPYAKLITMCAGIGSPGTLQEVFRGYLGDKSSKPVFEGPT-------PFDVLGTGYQRPMELATLRLFNMVAILPKWGELSPPDQSLVVQQGGTVVLDGTETIFRHDDSGILKYTDIDALL 269          
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Match: A0A2V0NNZ0_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NNZ0_9CHLO)

HSP 1 Score: 210 bits (535), Expect = 2.430e-62
Identity = 121/257 (47.08%), Postives = 161/257 (62.65%), Query Frame = 2
Query:  350 RMAVTTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFADFNSWELAQKLRHN-LPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLYVDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVLRGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEILRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVD-VLMDVVGA 1114
            R+A   P+    L    V  AA G+ + +   W   P G + +V FLTHF D  +WEL + L+   L  +++AG +V+ VG+G    A+AFA+A+G+P   LY D +A  YSAL F  GF   L G   V+PYL+LLPMLAGIGSPGT+Q VLRGY GDRSA   + GT        AF VLG    RP E+AT+RLQNMA +L KW  L+P +++L+TQQGG LVFDG +++Y++ D GIL Y   + VL   +GA
Sbjct:   31 RVAAVAPE-YAALNGCKVVPAAGGQPVDILSLWPCVP-GRRAVVVFLTHFGDLTTWELGRALKLKALQPLEEAGVQVITVGLGEPANARAFASASGYPSDHLYADTTAACYSALGFTPGF---LAGVDGVDPYLKLLPMLAGIGSPGTVQEVLRGYVGDRSAPPIFDGTL-----GKAFGVLGEGYQRPFELATLRLQNMASVLSKWGELAPSDRKLLTQQGGVLVFDGCDLLYKHSDPGILRYAPPEEVLAAALGA 277          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1430.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z7Y9_9STRA1.380e-11163.00AhpC/TSA antioxidant enzyme-domain-containing prot... [more]
D7G2X3_ECTSI1.560e-10260.71Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TVS2_9STRA2.150e-8554.70Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S0VR42_9CRYP1.270e-7044.90Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
A0A7S0TSY5_HEMAN6.150e-6848.40Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A699YK20_HAELA2.260e-6749.17Uncharacterized protein n=1 Tax=Haematococcus lacu... [more]
A0A1Y1I630_KLENI2.540e-6649.16Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A383VHC5_TETOB2.900e-6648.39Uncharacterized protein n=1 Tax=Tetradesmus obliqu... [more]
A0A250XFY5_9CHLO3.210e-6649.58Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A2V0NNZ0_9CHLO2.430e-6247.08Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1430contigP-wetherbeei_contig1430:1518..3049 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7G2X3
PFAMsAhpC-TSA_2
Model size1120
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons3
Evalue2.26e-104
EggNOG OGs2CY4S@1|root,2S21S@2759|Eukaryota
Ec32 ortholog descriptionThioredoxin-like fold
Ec32 orthologEc-09_004590.1
DescriptionAhpC/TSA antioxidant enzyme
Cds size915
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.0496922-UTR-P-wetherbeei_contig1430:1517..17221683186017.0496922-UTR-P-wetherbeei_contig1430:1517..1722Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1430 1518..1722 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186017.0614126-CDS-P-wetherbeei_contig1430:1722..23911683186017.0614126-CDS-P-wetherbeei_contig1430:1722..2391Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1430 1723..2391 +
1683186017.068841-CDS-P-wetherbeei_contig1430:2574..26781683186017.068841-CDS-P-wetherbeei_contig1430:2574..2678Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1430 2575..2678 +
1683186017.0764349-CDS-P-wetherbeei_contig1430:2907..30491683186017.0764349-CDS-P-wetherbeei_contig1430:2907..3049Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1430 2908..3049 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1430.1.1prot_P-wetherbeei_contig1430.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1430 1723..3049 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1430.1.1

>prot_P-wetherbeei_contig1430.1.1 ID=prot_P-wetherbeei_contig1430.1.1|Name=mRNA_P-wetherbeei_contig1430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=305bp
MTRQQRFLVARIAVVVALFHCASAFVQHHGPKGRLSAQTARASSPRYSRM
AVTTPDALQLLEDVSVFSAATGESMPLTKAWDLRPRGEKTIVSFLTHFAD
FNSWELAQKLRHNLPAIDDAGTKVVAVGIGSILGAKAFAAATGFPLGSLY
VDESANAYSALNFAQGFQPKLPGKIKVNPYLRLLPMLAGIGSPGTIQAVL
RGYTGDRSANAEWVGTTLQIVDKSAFDVLGTDGARPLEVATVRLQNMAEI
LRKWDVLSPPNKELITQQGGTLVFDGAEVIYEYRDKGILTYCDVDVLMDV
VGARR
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mRNA from alignment at P-wetherbeei_contig1430:1518..3049+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1430.1.1 ID=mRNA_P-wetherbeei_contig1430.1.1|Name=mRNA_P-wetherbeei_contig1430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1532bp|location=Sequence derived from alignment at P-wetherbeei_contig1430:1518..3049+ (Phaeothamnion wetherbeei SAG_119_79)
CGCACACGACAGGGTGAACAAGAGCTCTTCGTCGTACATCTCGAGTCTGG AAGCAGGAGGCAGGAGGCAAGAGCGAGACTCACGTTTGGTTCCATTTCAC TCTCGGTGAAGGGAGCAACGTCGGATTGCCAGCGAAGGCGTTGTATCTTT TTGACGTTCCACCTCAACGTTTCTCTCTCAATCTGGGAGAACGCCTCTCC CAACGATGACAAGGCAGCAGCGATTCCTGGTCGCTAGAATTGCGGTCGTC GTTGCTCTCTTTCACTGCGCTAGCGCGTTTGTACAGCATCATGGGCCTAA GGGACGTCTCTCAGCGCAGACTGCCCGTGCCTCGTCGCCACGGTATTCCA GGATGGCCGTCACCACGCCGGACGCCCTCCAGCTGCTGGAGGACGTTTCC GTGTTCAGCGCCGCCACAGGAGAATCGATGCCTCTGACCAAGGCGTGGGA TTTGAGGCCCCGCGGCGAAAAGACCATCGTATCGTTCCTGACGCACTTTG CAGACTTCAATTCGTGGGAGCTGGCACAGAAGCTGCGCCACAACTTGCCC GCCATCGATGATGCCGGCACCAAGGTAGTCGCTGTCGGCATCGGCAGCAT CTTGGGGGCCAAGGCCTTCGCCGCCGCCACGGGCTTCCCGCTCGGCAGCC TCTACGTCGACGAGAGCGCCAACGCCTACAGCGCGCTCAACTTCGCTCAG GGGTTTCAGCCGAAGCTTCCGGGAAAGATCAAGGTCAACCCGTACCTGCG GCTGCTGCCGATGCTCGCCGGCATCGGATCGCCCGGAACGATCCAGGCGG TGCTGCGCGGCTACACGGGGGACCGCTCCGCCAACGCGGAATGGGTGGGG ACGACGCTGCAAATTGTGGACAAGGTTAGCTTTGCTGATGTGGGGACGGT TTCGATCAACCGCGGCATTCTCCACTTTCTCTCTCCCCACGACTCCTGAA GCATGTTCGAACTCGAATAACTAATAGCCTTACTGACTTCGCCCTTCGTT CCTCTTCCCCTTCCCGCTCCTTGTGGTTCGGCTGGGATATCAAAATTATG GCTCCAGTCGGCCTTTGATGTCCTGGGAACGGACGGGGCGCGACCACTGG AGGTGGCGACGGTGCGGCTGCAGAACATGGCAGAAATTCTCCGGAAATGG GACGTCTTGAGGTTAGTTATAATGATCTTGCTTTGCGTTCTAACGAAAGG AATGCAGTTTGGCTGGTTTCCGGCATACGTACACATTTTAGCGCGCGCCA AGGTCAGGCGTCGTTGGTTTTGATGTCTGTGTGTCTTTTCTGAGACCAGA AGCCTACCGCGGCGGACCGACCGCCATCGCCGCCGCCACAATCGCTGCCC GCACTGCCGCCGTTACTCTGCCACCGTTCGTCACTGCCAGTCCGCCAAAC AAAGAGCTCATCACACAACAGGGCGGGACGCTCGTGTTCGACGGGGCGGA GGTAATTTACGAGTACCGCGACAAAGGCATCCTCACCTACTGCGACGTCG ACGTGCTGATGGACGTCGTCGGCGCCCGCCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1430:1518..3049+

>mRNA_P-wetherbeei_contig1430.1.1 ID=mRNA_P-wetherbeei_contig1430.1.1|Name=mRNA_P-wetherbeei_contig1430.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=915bp|location=Sequence derived from alignment at P-wetherbeei_contig1430:1518..3049+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACAAGGCAGCAGCGATTCCTGGTCGCTAGAATTGCGGTCGTCGTTGC
TCTCTTTCACTGCGCTAGCGCGTTTGTACAGCATCATGGGCCTAAGGGAC
GTCTCTCAGCGCAGACTGCCCGTGCCTCGTCGCCACGGTATTCCAGGATG
GCCGTCACCACGCCGGACGCCCTCCAGCTGCTGGAGGACGTTTCCGTGTT
CAGCGCCGCCACAGGAGAATCGATGCCTCTGACCAAGGCGTGGGATTTGA
GGCCCCGCGGCGAAAAGACCATCGTATCGTTCCTGACGCACTTTGCAGAC
TTCAATTCGTGGGAGCTGGCACAGAAGCTGCGCCACAACTTGCCCGCCAT
CGATGATGCCGGCACCAAGGTAGTCGCTGTCGGCATCGGCAGCATCTTGG
GGGCCAAGGCCTTCGCCGCCGCCACGGGCTTCCCGCTCGGCAGCCTCTAC
GTCGACGAGAGCGCCAACGCCTACAGCGCGCTCAACTTCGCTCAGGGGTT
TCAGCCGAAGCTTCCGGGAAAGATCAAGGTCAACCCGTACCTGCGGCTGC
TGCCGATGCTCGCCGGCATCGGATCGCCCGGAACGATCCAGGCGGTGCTG
CGCGGCTACACGGGGGACCGCTCCGCCAACGCGGAATGGGTGGGGACGAC
GCTGCAAATTGTGGACAAGTCGGCCTTTGATGTCCTGGGAACGGACGGGG
CGCGACCACTGGAGGTGGCGACGGTGCGGCTGCAGAACATGGCAGAAATT
CTCCGGAAATGGGACGTCTTGAGTCCGCCAAACAAAGAGCTCATCACACA
ACAGGGCGGGACGCTCGTGTTCGACGGGGCGGAGGTAATTTACGAGTACC
GCGACAAAGGCATCCTCACCTACTGCGACGTCGACGTGCTGATGGACGTC
GTCGGCGCCCGCCGC
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