mRNA_P-wetherbeei_contig14293.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: A0A836CDK9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDK9_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.270e-19 Identity = 47/61 (77.05%), Postives = 54/61 (88.52%), Query Frame = 1
Query: 16 LTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPLGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
LTF+EKRQLS +IN+L +KLTRVVQIIQERMPLG++ E EIEIDIDSMDT TLR+LQ YV
Sbjct: 632 LTFEEKRQLSVNINRLPAEKLTRVVQIIQERMPLGAQDESEIEIDIDSMDTGTLRELQIYV 692
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: D8LRH3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRH3_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 1.660e-16 Identity = 45/68 (66.18%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 1 APQEPLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPLGSRGEEEIEIDIDSMDTPTLRDLQRYVGD 204
A Q PLTFDEK+ LS IN L LTRVV+IIQ RMPLGS +EEIE+DIDSMD TLRDLQ ++ D
Sbjct: 1058 ATQNPLTFDEKKALSVAINNLDQSNLTRVVEIIQARMPLGS-SDEEIELDIDSMDNLTLRDLQGFIKD 1124
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: A0A7S2XZ98_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZ98_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 3.050e-16 Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 1
Query: 4 PQEPLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPLGSRG--EEEIEIDIDSMDTPTLRDLQRYV 198
P++ ++F +KR LS INKL P KLT+VVQIIQE MPLG +G +EE+EIDID++D PTLR L YV
Sbjct: 196 PEKKMSFQDKRNLSLRINKLPPKKLTKVVQIIQESMPLGQKGSEDEEVEIDIDALDEPTLRRLDEYV 262
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: A0A8J2STY6_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2STY6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 7.800e-16 Identity = 40/63 (63.49%), Postives = 49/63 (77.78%), Query Frame = 1
Query: 13 PLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPL-GSRGEEEIEIDIDSMDTPTLRDLQRYV 198
PLTFDEK LSDDIN L PDKL VV+I+QE MPL G ++EIE+DI+++D TLR LQ+YV
Sbjct: 508 PLTFDEKEALSDDINALPPDKLAHVVKIVQESMPLRGRHDDDEIEVDIETLDNDTLRHLQKYV 570
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: F0YNJ8_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNJ8_AURAN) HSP 1 Score: 73.9 bits (180), Expect = 4.920e-14 Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 1
Query: 16 LTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPL-GSRGEEEIEIDIDSMDTPTLRDLQRYV 198
LTFDEK LS+DIN L P+KL VV+I+QE MPL G ++EIE+DI+++D TLR LQ+YV
Sbjct: 190 LTFDEKEALSNDINDLPPEKLAHVVKIVQESMPLTGRHDDDEIEVDIETLDNDTLRHLQKYV 251
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: UPI0005212D6F (bromodomain-containing protein 2-like n=3 Tax=Neognathae TaxID=8825 RepID=UPI0005212D6F) HSP 1 Score: 68.6 bits (166), Expect = 2.330e-13 Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 13 PLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMP-LGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
P+T+DEKRQLS DINKL +KL RVV IIQ R P L EEIEID +++ TLR+L+RYV
Sbjct: 27 PMTYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKPSTLRELERYV 89
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: UPI001B86617D (bromodomain-containing protein 2-like n=1 Tax=Pyrgilauda ruficollis TaxID=221976 RepID=UPI001B86617D) HSP 1 Score: 67.4 bits (163), Expect = 4.350e-13 Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 13 PLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMP-LGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
P+++DEKRQLS DINKL +KL RVV IIQ R P L EEIEID +++ TLR+L+RYV
Sbjct: 29 PMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKASTLRELERYV 91
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: B3RN78_TRIAD (Uncharacterized protein (Fragment) n=1 Tax=Trichoplax adhaerens TaxID=10228 RepID=B3RN78_TRIAD) HSP 1 Score: 71.6 bits (174), Expect = 5.350e-13 Identity = 40/64 (62.50%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 10 EPLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMP-LGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
EP+T+DEKRQLS DINKL DKL RVV IIQ R P L EEIEID +++ TLR+L+RYV
Sbjct: 309 EPMTYDEKRQLSLDINKLPGDKLGRVVHIIQSREPALRESNPEEIEIDFETLKPSTLRELERYV 372
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: UPI001B809146 (bromodomain-containing protein 2-like n=1 Tax=Onychostruthus taczanowskii TaxID=356909 RepID=UPI001B809146) HSP 1 Score: 67.4 bits (163), Expect = 1.060e-12 Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 1
Query: 13 PLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMP-LGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
P+++DEKRQLS DINKL +KL RVV IIQ R P L EEIEID +++ TLR+L+RYV
Sbjct: 54 PMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPEEIEIDFETLKASTLRELERYV 116
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Match: A0A401QI20_SCYTO (NET domain-containing protein (Fragment) n=1 Tax=Scyliorhinus torazame TaxID=75743 RepID=A0A401QI20_SCYTO) HSP 1 Score: 66.2 bits (160), Expect = 1.300e-12 Identity = 36/64 (56.25%), Postives = 47/64 (73.44%), Query Frame = 1
Query: 10 EPLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMP-LGSRGEEEIEIDIDSMDTPTLRDLQRYV 198
+P+++DEKRQLS DINKL +KL RVV IIQ R P L +EIEID +++ TLR+L+RYV
Sbjct: 22 QPMSYDEKRQLSLDINKLPGEKLGRVVHIIQSREPSLRDSNPDEIEIDFETLKPTTLRELERYV 85 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14293.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14293.1.1 >prot_P-wetherbeei_contig14293.1.1 ID=prot_P-wetherbeei_contig14293.1.1|Name=mRNA_P-wetherbeei_contig14293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=68bp APQEPLTFDEKRQLSDDINKLTPDKLTRVVQIIQERMPLGSRGEEEIEIDback to top mRNA from alignment at P-wetherbeei_contig14293:263..685- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14293.1.1 ID=mRNA_P-wetherbeei_contig14293.1.1|Name=mRNA_P-wetherbeei_contig14293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig14293:263..685- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14293:263..685- >mRNA_P-wetherbeei_contig14293.1.1 ID=mRNA_P-wetherbeei_contig14293.1.1|Name=mRNA_P-wetherbeei_contig14293.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=204bp|location=Sequence derived from alignment at P-wetherbeei_contig14293:263..685- (Phaeothamnion wetherbeei SAG_119_79)back to top |