mRNA_P-wetherbeei_contig14282.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14282.1.1
Unique NamemRNA_P-wetherbeei_contig14282.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A537NLF8_9PROT (Choline dehydrogenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A537NLF8_9PROT)

HSP 1 Score: 628 bits (1619), Expect = 3.440e-223
Identity = 313/351 (89.17%), Postives = 328/351 (93.45%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPN-LHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKGRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAAQ 1050
            KTQTSIY GRRMSVAHCYIEPAMKR   L VVTNA TLRVLLEGKRCVGVEYEKDGR+VQA+ RETILSAGGVASPQILELSGIG+ DLL +HGIEVKHEL AVGENFRDHINARIIW++K   VSYNHMARG+GAVTQMMKYLATGGGFMSLPSAPLLAFL+TR EL TPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHI+SPDPKAQPAIRFNFLAD IDQ AMV GFRMMRKIVDA PMDAYRD EFSPGPSVG+D+EILTWIR+NSQTAYHP+GTCRMGPAG  TVVDDKLKVHG+EGLRVADASIFPTMPSGNTNAPSIMVGEKMADIL+A AQ
Sbjct:  185 KTQTSIYKGRRMSVAHCYIEPAMKRSETLQVVTNAHTLRVLLEGKRCVGVEYEKDGRVVQARARETILSAGGVASPQILELSGIGRXDLLKQHGIEVKHELPAVGENFRDHINARIIWKVKDPKVSYNHMARGVGAVTQMMKYLATGGGFMSLPSAPLLAFLRTRRELETPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIKSPDPKAQPAIRFNFLADPIDQRAMVDGFRMMRKIVDAPPMDAYRDSEFSPGPSVGSDDEILTWIRHNSQTAYHPVGTCRMGPAGPKTVVDDKLKVHGLEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILRAGAQ 535          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A259MMX4_9PROT (Choline dehydrogenase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MMX4_9PROT)

HSP 1 Score: 615 bits (1586), Expect = 3.010e-218
Identity = 306/349 (87.68%), Postives = 315/349 (90.26%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKGRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQTSIY GRRMSVAHCYIEPAMKRPNLHVVTNA TLRVLLEGKRCVGVEY+KDG+ VQAK +ETILSAGGVASPQ                  EVKHELKAVGENFRDHINARIIWRLKVA+VSYNHMARG+GAVTQMMKYLATGGGFMSLPSAPLL FLKTRPEL TPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRS DPKA P+IRFNFLADRIDQDAM  GFRMMRKIVDAAPMD YRDEEFSPGPSV +DEEILTWIRNNSQTAYHPIGTCRMGP G NTVVDDKL+VHGI GLR+ADASIFPTMPSGNTNAPSIMVGEKMADILK AA
Sbjct:  183 KTQTSIYKGRRMSVAHCYIEPAMKRPNLHVVTNAHTLRVLLEGKRCVGVEYDKDGKTVQAKAKETILSAGGVASPQXXXXXXXXXXXXXXXXXXEVKHELKAVGENFRDHINARIIWRLKVASVSYNHMARGIGAVTQMMKYLATGGGFMSLPSAPLLGFLKTRPELETPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSADPKAHPSIRFNFLADRIDQDAMTAGFRMMRKIVDAAPMDPYRDEEFSPGPSVQSDEEILTWIRNNSQTAYHPIGTCRMGPEGPNTVVDDKLRVHGIAGLRIADASIFPTMPSGNTNAPSIMVGEKMADILKGAA 531          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A6N6ZRN7_9PROT (Glucose-methanol-choline oxidoreductase n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A6N6ZRN7_9PROT)

HSP 1 Score: 611 bits (1576), Expect = 9.960e-217
Identity = 304/348 (87.36%), Postives = 313/348 (89.94%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKGRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAA 1044
            KTQTSIY GRRMSVAHCYIEPAMKRPNLHVVTNA TLRVLLEGKRC+GVEYEKDG+ VQA  +ETILSAGGVASPQI                 EVKHELKAVGENFRDHINARIIWRLKVA+VSYNHMARG+GAVTQMMKYLATGGGFMSLPSAPLL FLKTRPEL TPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRS DPKA PAIRFNFLADRIDQDAM  GFRMMR+IVDA PMD YRDEEFSPGPSV TDEEIL WIRNNSQTAYHPIGTCRMGP G +TVVDDKL+VHGI+GLRVADASIFPTMPSGNTNAPSIMVGEKMADILK A
Sbjct:  183 KTQTSIYKGRRMSVAHCYIEPAMKRPNLHVVTNAHTLRVLLEGKRCIGVEYEKDGKAVQAHAKETILSAGGVASPQIXXXXXXXXXXXXXXXXXEVKHELKAVGENFRDHINARIIWRLKVASVSYNHMARGIGAVTQMMKYLATGGGFMSLPSAPLLGFLKTRPELETPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSADPKAHPAIRFNFLADRIDQDAMTAGFRMMRRIVDAKPMDPYRDEEFSPGPSVQTDEEILAWIRNNSQTAYHPIGTCRMGPEGPSTVVDDKLRVHGIQGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKGA 530          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A1H8XWL4_9PROT (Choline dehydrogenase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8XWL4_9PROT)

HSP 1 Score: 597 bits (1539), Expect = 4.350e-211
Identity = 299/350 (85.43%), Postives = 315/350 (90.00%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRP-NLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKGRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQTSIY GRRMSVAHCYIEPAMKR  NLHVVT+AMTLRVLL+GKRC+GVEYEKDG++VQAK RETILSAGGVASPQI                 EVKHELKAVGENFRDHINARI+WR+K   VSYNHMARG+GAVTQMMKYLATGGGFMSLPSAPLLAFLKTR EL TPDVQMHLVPYSIKDPKTRKLQDFPSMTI+CYQLRPESLGSIHIRS DPKAQPAIRFNFLAD IDQ AMV GFRM+R+IV+AAPMD YR EEFSPGPS+ TDE+ILTWIRNNSQTAYHPIGTCRMGPAG  TVVDDKL+VHG+EGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA
Sbjct:  183 KTQTSIYKGRRMSVAHCYIEPAMKRSSNLHVVTDAMTLRVLLDGKRCIGVEYEKDGKVVQAKARETILSAGGVASPQIXXXXXXXXXXXXXXXXXEVKHELKAVGENFRDHINARIVWRVKDPRVSYNHMARGVGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRKELETPDVQMHLVPYSIKDPKTRKLQDFPSMTISCYQLRPESLGSIHIRSADPKAQPAIRFNFLADPIDQAAMVEGFRMIRRIVNAAPMDGYRGEEFSPGPSIETDEQILTWIRNNSQTAYHPIGTCRMGPAGPTTVVDDKLRVHGLEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 532          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A7C2R4A0_9HYPH (Choline dehydrogenase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7C2R4A0_9HYPH)

HSP 1 Score: 526 bits (1354), Expect = 5.320e-183
Identity = 254/350 (72.57%), Postives = 296/350 (84.57%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKGR-ETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQ SI  GRRMSVAHCY+ PA +RPNL +VT A T RV+LEG+RCVGV Y++ GR+V+A+ R E IL AG VA+PQ+LELSGIG+P++L  HGIEV+H L AVGENFRDHINARI WR+K  ++SYNH ARG+GA  + ++YLATG GF SLPSAPLLAFLKTRPELATPDVQMH+VPY+IKDPKTR+LQDFP+M +ACYQLRPESLGSIHIRSPDP   PAIRFNFL+D IDQ  MV GFRMMR+IV A PMDA R EE+SPGP V +DE+IL +IR N+ TAYHPIGTCRMGP G  TVVD+KL+VHG+E LR+ADASIFPTMPSGNTNAP IMVGEK AD+++  A
Sbjct:  182 KTQASIRNGRRMSVAHCYLRPARRRPNLDIVTEAPTRRVVLEGRRCVGVVYQRWGRMVEARARREVILCAGAVATPQLLELSGIGRPEVLKAHGIEVQHALPAVGENFRDHINARIAWRVKEKHLSYNHKARGIGAAMEALRYLATGRGFFSLPSAPLLAFLKTRPELATPDVQMHIVPYAIKDPKTRRLQDFPAMAVACYQLRPESLGSIHIRSPDPDEHPAIRFNFLSDPIDQRTMVEGFRMMRRIVGAKPMDALRGEEYSPGPQVASDEDILDFIRANAHTAYHPIGTCRMGPQGPRTVVDEKLRVHGLESLRIADASIFPTMPSGNTNAPCIMVGEKAADLIRGRA 531          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A5C8PP53_9HYPH (Choline dehydrogenase n=1 Tax=Vineibacter terrae TaxID=2586908 RepID=A0A5C8PP53_9HYPH)

HSP 1 Score: 519 bits (1337), Expect = 2.240e-180
Identity = 257/350 (73.43%), Postives = 292/350 (83.43%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAK-GRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQ +I  GRRMS AHCY+ PA KR NL +VT A  LR+LL+G  C GV YE+ G++V+A+ GRE +LSAG V SPQILELSGIG+P++L  HGI V+H L AVGENFRDHINARI WR+K   VSYN MARG+G V Q++KYL TGGGF+SLPSAPLLAFLKTRPEL TPDVQMHLVPYSIKDPK RKLQ FPSMT+ACYQLRPESLGSIHIRS DP A PAIRFNFLAD IDQ AMV GFRMMR+IV+A PMDA R +E+SPG +V +DE+IL+WIR NS+TAYHPIGTCRM P G N VVDD+LKVHGI GLR+ADASI PTMPSGNTNA  IM+GEK AD+L+A A
Sbjct:  186 KTQATISHGRRMSTAHCYLAPARKRANLRIVTEAPALRLLLDGAHCTGVAYEQHGQVVEARAGREVVLSAGAVKSPQILELSGIGRPEVLAAHGIAVRHALPAVGENFRDHINARIQWRIKAHGVSYNEMARGVGLVGQVLKYLTTGGGFLSLPSAPLLAFLKTRPELDTPDVQMHLVPYSIKDPKRRKLQTFPSMTVACYQLRPESLGSIHIRSADPHADPAIRFNFLADPIDQRAMVDGFRMMRRIVEAPPMDALRGDEYSPGAAVTSDEQILSWIRQNSETAYHPIGTCRMAP-GPNAVVDDQLKVHGIGGLRIADASIMPTMPSGNTNAACIMIGEKAADLLRATA 534          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: UPI000932048B (GMC family oxidoreductase N-terminal domain-containing protein n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI000932048B)

HSP 1 Score: 513 bits (1322), Expect = 3.820e-178
Identity = 250/350 (71.43%), Postives = 292/350 (83.43%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAK-GRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQTSI+ G RMSVA CY++PAMKRPNL V+ +A T R++LEGKRCVG+ YE+ GR ++ + GRE ILSAG VA+PQ+LELSGIG+P++L + GIEVKH L AVGEN RDHINAR IW +KV +VSYN  ARG GAV + +KY  T GGF+SLPSAPLLAFLKT+ E+ TPDVQMH+VPYS+KDPK R LQ+FPSMT++ YQLRPESLGSIHIRS DP  QP I FNFL + IDQ  MV GF+M+RKIV    +DA+R +E+ PGP   TD++IL WIRNNSQTAYHPIGTCRMGP G NTVVDDKLKVHGIEGLR+ADASIFPTMPSGNTNAPSIMVGEK A+I+KAAA
Sbjct:  182 KTQTSIHKGIRMSVARCYLKPAMKRPNLRVIADAPTRRIVLEGKRCVGIVYERYGRQIEVRAGREVILSAGAVATPQLLELSGIGRPEILKQFGIEVKHALPAVGENLRDHINARGIWHVKVPSVSYNTRARGFGAVKEALKYATTRGGFLSLPSAPLLAFLKTQKEMETPDVQMHIVPYSVKDPKRRILQEFPSMTLSVYQLRPESLGSIHIRSADPNDQPKILFNFLTNPIDQQCMVDGFKMVRKIVSQPALDAFRGDEYDPGPKAKTDDDILAWIRNNSQTAYHPIGTCRMGPVGPNTVVDDKLKVHGIEGLRIADASIFPTMPSGNTNAPSIMVGEKAAEIIKAAA 531          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A849TGD3_9HYPH (Choline dehydrogenase n=1 Tax=Hyphomicrobiaceae bacterium TaxID=2015799 RepID=A0A849TGD3_9HYPH)

HSP 1 Score: 508 bits (1308), Expect = 5.090e-176
Identity = 246/350 (70.29%), Postives = 289/350 (82.57%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAKG-RETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQ +I  G+RMS+A+ Y+  AM+RPNLHV+T A    ++L+GKRCVGV YEK  + V+A+  RE I+SAG VA+PQ+LELSGIG+PD+L  HGIEVKH L AVGENFRDHINARIIWR     VSYNHMARGLG+V Q +KY+ATGGGF SLPSAPL+AFLKT P+LA+PDVQMHL+PYSIKDPK R LQDFPS T+ACYQLRPESLGSIHIRS DP   PAI+FNFL D IDQ   V GF+MMR+IV A  M+  R +E SPG +  +D +IL WIRNNSQTAYHPIGTCRMGPAG +TVVDD+L+VHG+ GLR+ADASIFPTMPSGNTNAPSIMVGEK AD+++ +A
Sbjct:  182 KTQVNIRRGKRMSIANTYLRSAMRRPNLHVITEASARHLVLDGKRCVGVAYEKSDKHVEARATREVIVSAGAVATPQLLELSGIGRPDVLQAHGIEVKHPLAAVGENFRDHINARIIWRATDPTVSYNHMARGLGSVAQALKYMATGGGFFSLPSAPLVAFLKTHPDLASPDVQMHLIPYSIKDPKRRILQDFPSFTVACYQLRPESLGSIHIRSADPNVPPAIKFNFLTDPIDQRTAVEGFKMMRRIVAAPAMEKIRGDEVSPGLNTSSDSDILHWIRNNSQTAYHPIGTCRMGPAGPSTVVDDQLRVHGLSGLRIADASIFPTMPSGNTNAPSIMVGEKAADLIRQSA 531          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A2E6J303_9BACT (Choline dehydrogenase n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6J303_9BACT)

HSP 1 Score: 506 bits (1302), Expect = 4.900e-175
Identity = 241/348 (69.25%), Postives = 289/348 (83.05%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAK-GRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQ--NTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADIL 1035
            KTQ +I+ GRRMS AHCY+ PAMKR NLHVVT A+TL ++LEG+RCVGV Y + GR  +A+ G E ILSAG + SPQ+LELSGIG+ ++L  HGIEV HEL AVGENFRDHINARI W++    VSYN  A+G+  V Q+++YL TGGGF+SLPSAPLLAFLKTRPEL TPDVQ+HLVPY++KDPK RKL  FP MT++CYQLRPESLGSIHIRS DP+ QPAIRFNFL +  D++ MV GF+MMR+IV A+PMD +R EE+SPGP V +D+EI  WIR NS+TAYHPIGTCRMGP+ +  N VVD+ LKVHG++GLR+ADASIFPTMPSGNTNAPSIMVGEK AD++
Sbjct:  185 KTQATIWNGRRMSTAHCYLRPAMKRTNLHVVTEALTLGLILEGRRCVGVRYTQGGREQEARSGGEVILSAGAIGSPQVLELSGIGKGEVLREHGIEVLHELPAVGENFRDHINARIQWKVTAPGVSYNERAQGINLVGQVLRYLTTGGGFISLPSAPLLAFLKTRPELETPDVQLHLVPYAVKDPKRRKLHPFPGMTVSCYQLRPESLGSIHIRSSDPRTQPAIRFNFLGNSNDRETMVAGFKMMRRIVQASPMDIFRGEEYSPGPGVDSDQEIENWIRENSETAYHPIGTCRMGPSSRAANAVVDENLKVHGLDGLRIADASIFPTMPSGNTNAPSIMVGEKCADLI 532          
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Match: A0A5C5TAN3_9HYPH (Choline dehydrogenase n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TAN3_9HYPH)

HSP 1 Score: 505 bits (1300), Expect = 8.900e-175
Identity = 249/350 (71.14%), Postives = 287/350 (82.00%), Query Frame = 1
Query:    1 KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVEYEKDGRIVQAK-GRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHELKAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFMSLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACYQLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDAAPMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNTVVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAA 1047
            KTQ +I  GRRMS A+CY+ PA++R NL ++T A  LR+L +G RC GV YE+ G++ + + GRE ILSAG V +PQILELSGIG+P++L  HGI V+H L AVGENFRDHINARI WR+K A VSYN MARGLG V Q  KYL  GGGF SLPSAPLLAFLKTRPEL TPDVQMHLVPY+IKDPK RKLQ FP MT+ACYQLRPESLGSIHIRS +P A PAIRFNFLAD IDQ AMV GF MMR+IV AAPMDA+R EE SPG SV TD++IL WIR++S+TAYHPIGTCRM P G N VV+D+LKV+GI+GLR+ADASI PTMPSGNTNA  IM+GEK AD+L+ AA
Sbjct:  185 KTQATISRGRRMSTAYCYLAPALRRSNLRIMTQAPVLRLLFDGTRCTGVAYEQQGKVTEVRAGREVILSAGAVKTPQILELSGIGRPEVLQPHGIAVRHALPAVGENFRDHINARIQWRVKAAGVSYNEMARGLGLVGQAWKYLTAGGGFFSLPSAPLLAFLKTRPELETPDVQMHLVPYAIKDPKRRKLQPFPGMTVACYQLRPESLGSIHIRSANPHADPAIRFNFLADPIDQRAMVDGFHMMRRIVAAAPMDAFRGEEHSPGTSVATDDQILDWIRHHSETAYHPIGTCRMAP-GPNAVVNDQLKVYGIDGLRIADASIMPTMPSGNTNAACIMIGEKAADLLRTAA 533          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14282.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A537NLF8_9PROT3.440e-22389.17Choline dehydrogenase n=2 Tax=Alphaproteobacteria ... [more]
A0A259MMX4_9PROT3.010e-21887.68Choline dehydrogenase n=7 Tax=Alphaproteobacteria ... [more]
A0A6N6ZRN7_9PROT9.960e-21787.36Glucose-methanol-choline oxidoreductase n=4 Tax=Al... [more]
A0A1H8XWL4_9PROT4.350e-21185.43Choline dehydrogenase n=2 Tax=Alphaproteobacteria ... [more]
A0A7C2R4A0_9HYPH5.320e-18372.57Choline dehydrogenase n=1 Tax=Hyphomicrobiales bac... [more]
A0A5C8PP53_9HYPH2.240e-18073.43Choline dehydrogenase n=1 Tax=Vineibacter terrae T... [more]
UPI000932048B3.820e-17871.43GMC family oxidoreductase N-terminal domain-contai... [more]
A0A849TGD3_9HYPH5.090e-17670.29Choline dehydrogenase n=1 Tax=Hyphomicrobiaceae ba... [more]
A0A2E6J303_9BACT4.900e-17569.25Choline dehydrogenase n=1 Tax=Acidobacteria bacter... [more]
A0A5C5TAN3_9HYPH8.900e-17571.14Choline dehydrogenase n=1 Tax=Reyranella sp. CPCC ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14282contigP-wetherbeei_contig14282:2..1057 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1205680.CAKO01000004_gene3635
PFAMsGMC_oxred_C,GMC_oxred_N
Model size1056
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00087
KEGG koko:K00108
KEGG ReactionR01025
KEGG Pathwayko00260,ko01100,map00260,map01100
KEGG ModuleM00555
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.92e-223
EggNOG OGsCOG2303@1|root,COG2303@2|Bacteria,1MV19@1224|Proteobacteria,2TQKQ@28211|Alphaproteobacteria
EC1.1.99.1
DescriptionInvolved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate
Cds size1056
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186016.0717866-CDS-P-wetherbeei_contig14282:1..10571683186016.0717866-CDS-P-wetherbeei_contig14282:1..1057Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14282 2..1057 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14282.1.1prot_P-wetherbeei_contig14282.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14282 2..1057 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14282.1.1

>prot_P-wetherbeei_contig14282.1.1 ID=prot_P-wetherbeei_contig14282.1.1|Name=mRNA_P-wetherbeei_contig14282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=352bp
KTQTSIYTGRRMSVAHCYIEPAMKRPNLHVVTNAMTLRVLLEGKRCVGVE
YEKDGRIVQAKGRETILSAGGVASPQILELSGIGQPDLLHRHGIEVKHEL
KAVGENFRDHINARIIWRLKVANVSYNHMARGLGAVTQMMKYLATGGGFM
SLPSAPLLAFLKTRPELATPDVQMHLVPYSIKDPKTRKLQDFPSMTIACY
QLRPESLGSIHIRSPDPKAQPAIRFNFLADRIDQDAMVGGFRMMRKIVDA
APMDAYRDEEFSPGPSVGTDEEILTWIRNNSQTAYHPIGTCRMGPAGQNT
VVDDKLKVHGIEGLRVADASIFPTMPSGNTNAPSIMVGEKMADILKAAAQ
Y*
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mRNA from alignment at P-wetherbeei_contig14282:2..1057+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14282.1.1 ID=mRNA_P-wetherbeei_contig14282.1.1|Name=mRNA_P-wetherbeei_contig14282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1056bp|location=Sequence derived from alignment at P-wetherbeei_contig14282:2..1057+ (Phaeothamnion wetherbeei SAG_119_79)
AAGACGCAGACCTCGATCTACACGGGCCGGCGCATGAGCGTGGCGCACTG CTATATCGAGCCGGCGATGAAGCGGCCGAACCTGCATGTCGTCACCAATG CGATGACCTTGCGGGTGCTGCTGGAAGGCAAGCGCTGCGTCGGCGTGGAA TACGAAAAAGACGGCAGGATCGTCCAGGCCAAGGGCCGCGAGACCATCCT GTCGGCGGGCGGCGTTGCCAGCCCGCAGATTCTGGAACTCTCCGGCATCG GCCAGCCCGACCTGCTCCACCGGCACGGCATCGAGGTGAAGCACGAGCTG AAGGCGGTCGGCGAGAATTTCCGCGACCACATCAACGCCCGCATCATCTG GCGGCTCAAGGTGGCCAACGTCTCCTACAACCACATGGCGCGCGGCCTGG GCGCTGTGACGCAAATGATGAAGTACCTGGCGACCGGCGGCGGCTTCATG AGCCTGCCTTCGGCGCCGTTGCTGGCCTTCCTCAAGACGCGCCCGGAACT GGCGACGCCCGACGTGCAGATGCATCTCGTGCCCTATTCGATCAAGGACC CGAAGACCCGCAAGCTGCAGGACTTCCCGTCGATGACGATCGCCTGCTAC CAGCTCCGCCCCGAGAGCCTGGGCTCGATCCATATCCGCTCGCCCGATCC CAAGGCGCAGCCGGCGATCCGCTTCAACTTCCTGGCCGACAGGATCGACC AGGACGCGATGGTCGGCGGCTTCCGCATGATGCGGAAGATCGTCGATGCC GCGCCCATGGACGCCTATCGCGACGAGGAGTTCTCGCCCGGCCCGTCGGT CGGCACCGACGAGGAGATCCTGACCTGGATCCGCAACAACTCGCAGACCG CCTATCACCCGATCGGCACCTGCCGCATGGGACCGGCGGGACAGAACACC GTGGTCGACGACAAGCTCAAGGTGCACGGCATCGAGGGGCTGCGCGTGGC CGACGCCTCGATCTTCCCGACCATGCCCTCGGGCAACACCAACGCGCCCT CGATCATGGTCGGCGAGAAGATGGCCGATATTCTGAAAGCGGCGGCCCAG TATTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14282:2..1057+

>mRNA_P-wetherbeei_contig14282.1.1 ID=mRNA_P-wetherbeei_contig14282.1.1|Name=mRNA_P-wetherbeei_contig14282.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1056bp|location=Sequence derived from alignment at P-wetherbeei_contig14282:2..1057+ (Phaeothamnion wetherbeei SAG_119_79)
AAGACGCAGACCTCGATCTACACGGGCCGGCGCATGAGCGTGGCGCACTG
CTATATCGAGCCGGCGATGAAGCGGCCGAACCTGCATGTCGTCACCAATG
CGATGACCTTGCGGGTGCTGCTGGAAGGCAAGCGCTGCGTCGGCGTGGAA
TACGAAAAAGACGGCAGGATCGTCCAGGCCAAGGGCCGCGAGACCATCCT
GTCGGCGGGCGGCGTTGCCAGCCCGCAGATTCTGGAACTCTCCGGCATCG
GCCAGCCCGACCTGCTCCACCGGCACGGCATCGAGGTGAAGCACGAGCTG
AAGGCGGTCGGCGAGAATTTCCGCGACCACATCAACGCCCGCATCATCTG
GCGGCTCAAGGTGGCCAACGTCTCCTACAACCACATGGCGCGCGGCCTGG
GCGCTGTGACGCAAATGATGAAGTACCTGGCGACCGGCGGCGGCTTCATG
AGCCTGCCTTCGGCGCCGTTGCTGGCCTTCCTCAAGACGCGCCCGGAACT
GGCGACGCCCGACGTGCAGATGCATCTCGTGCCCTATTCGATCAAGGACC
CGAAGACCCGCAAGCTGCAGGACTTCCCGTCGATGACGATCGCCTGCTAC
CAGCTCCGCCCCGAGAGCCTGGGCTCGATCCATATCCGCTCGCCCGATCC
CAAGGCGCAGCCGGCGATCCGCTTCAACTTCCTGGCCGACAGGATCGACC
AGGACGCGATGGTCGGCGGCTTCCGCATGATGCGGAAGATCGTCGATGCC
GCGCCCATGGACGCCTATCGCGACGAGGAGTTCTCGCCCGGCCCGTCGGT
CGGCACCGACGAGGAGATCCTGACCTGGATCCGCAACAACTCGCAGACCG
CCTATCACCCGATCGGCACCTGCCGCATGGGACCGGCGGGACAGAACACC
GTGGTCGACGACAAGCTCAAGGTGCACGGCATCGAGGGGCTGCGCGTGGC
CGACGCCTCGATCTTCCCGACCATGCCCTCGGGCAACACCAACGCGCCCT
CGATCATGGTCGGCGAGAAGATGGCCGATATTCTGAAAGCGGCGGCCCAG
TATTAG
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