mRNA_P-wetherbeei_contig14259.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14259.2.1
Unique NamemRNA_P-wetherbeei_contig14259.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A3S0G5C6_9BRAD (Parvulin-like PPIase n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A3S0G5C6_9BRAD)

HSP 1 Score: 329 bits (843), Expect = 5.320e-108
Identity = 167/255 (65.49%), Postives = 212/255 (83.14%), Query Frame = 1
Query:  250 GEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            GEVVAR+GGRD++T EV+ F++G+   ++ ALA+DPA+LSQA+R+MLANQLVLKEA  K WQDQPAVAAQL +++D AI+  YLQ+VS PP++YP+EAEI K Y+ANK+A +VPRQFR+AQIF+AL   AD   +D+ RKKL E+Q KLKQPKADFAAIA+E+S Q   AE GG+LGWV E  + PEIKTQVMG++N A+SEPI+L DG+HI+KLIETKAA TR LA+VR  +VQ+LR+ RAE +RRAYLAR+LE
Sbjct:   75 GEVVARVGGRDISTAEVQAFLAGMAPDQRAALAKDPAMLSQALRIMLANQLVLKEANDKNWQDQPAVAAQLAKLRDDAIIAIYLQSVSIPPANYPDEAEIQKTYEANKSALIVPRQFRLAQIFLALPDGADKAIEDQVRKKLAEVQLKLKQPKADFAAIAKENSMQAGAAENGGDLGWVAETMLIPEIKTQVMGMTNNAVSEPIKLADGFHIVKLIETKAAATRPLAEVRAALVQRLRADRAELLRRAYLARILE 329          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A4P6HHY4_9HYPH (Parvulin-like PPIase n=3 Tax=Mesorhizobium TaxID=68287 RepID=A0A4P6HHY4_9HYPH)

HSP 1 Score: 324 bits (830), Expect = 2.540e-106
Identity = 166/263 (63.12%), Postives = 208/263 (79.09%), Query Frame = 1
Query:  229 AAPRVAEGE-VVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            AA + A G+ +VAR+G RD+T  EVR  ++GLG   Q AL RDPA LSQ +RL+LA+QLVLKEA  KKW DQPAVAAQL  ++D A+ ESYLQ VS PP SYP +A++ +AY+ANKTAF+VPRQFR+AQIFVALE +AD    D A+KKL ++Q +LK  +ADFAAIA+E SDQRDTAE GGE+GWV E Q+RPEIK  VMGLS   +SEPI+LDDGWHIIKL++TKA+ TR L +V+ ++VQ+LR QR E ++R YLAR+LE
Sbjct:   46 AAAKAASGDDIVARVGERDITIEEVRASLAGLGPERQAALTRDPAALSQTIRLLLASQLVLKEANDKKWADQPAVAAQLASLRDSAVAESYLQAVSVPPESYPADADVQQAYEANKTAFVVPRQFRLAQIFVALEPDADKAKTDLAKKKLADVQSRLKPAQADFAAIAKELSDQRDTAESGGEIGWVAETQVRPEIKDHVMGLSKNGLSEPIKLDDGWHIIKLMDTKASTTRLLDEVKPLLVQRLREQRQEVLKREYLARLLE 308          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: UPI001CE35682 (peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. CNPSo 4026 TaxID=2821403 RepID=UPI001CE35682)

HSP 1 Score: 320 bits (819), Expect = 1.740e-104
Identity = 156/255 (61.18%), Postives = 216/255 (84.71%), Query Frame = 1
Query:  250 GEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            GE+VAR+GGRDV+++E+R F++ +G  ++ ALARDPALL+Q +R M A QL+LKEA  KKWQ+QPA+AAQL ++++ AIVE+YLQ+VS PP +YP+EAEI KAYDANK A ++PR+F +AQI+VAL   +D+  ++KA+ K+ ++Q KLKQPKADFA IA++++DQRD A++GG+LGW+PE Q+ PEIKT+VMG++  A+SEPI+L DG+HI+KLIETK +ET +LADVR+ +VQ+LR+QRAE  RRAY+ARVLE
Sbjct:   61 GELVARVGGRDVSSSEIRTFLAAVGPDQRAALARDPALLNQTLRAMFARQLILKEAADKKWQEQPAIAAQLAKLREEAIVETYLQSVSAPPENYPDEAEIQKAYDANKGALVMPRRFHLAQIYVALAEGSDSAAEEKAKAKVADIQAKLKQPKADFAQIAKDTTDQRDLADKGGDLGWLPEPQLVPEIKTRVMGMTVNAVSEPIKLADGYHIVKLIETKPSETMALADVRDTLVQRLRAQRAELNRRAYVARVLE 315          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A345ZUU8_9HYPH (Parvulin-like PPIase n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZUU8_9HYPH)

HSP 1 Score: 317 bits (813), Expect = 3.180e-103
Identity = 157/254 (61.81%), Postives = 210/254 (82.68%), Query Frame = 1
Query:  253 EVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            +VVAR+G RDVT  EVR F++ L  R+Q  LA+DPALLS+ +R+MLANQLVLKEA  KKW   PAV AQL+R+++ A+VE+YL++VS PP SYP++AEI KAYDANKTAF+VPR++R++QIFVAL   AD   +  A+KKL E+Q KLK  K DF A+A+E SD++ +AE+GGE+GW+ E+QIRPEIK +V+GL++G +S PI++ DGWH IKL+ETKAAETR L++VRE +VQ+LR+QRAEA++RAYLA++LE
Sbjct:   87 DVVARVGDRDVTVGEVRQFVAALPPRDQAVLAQDPALLSRTLRMMLANQLVLKEAVAKKWDKNPAVEAQLERVREQAVVETYLRSVSQPPESYPDDAEIQKAYDANKTAFVVPRRYRLSQIFVALPAEADKNAEAAAQKKLAEVQAKLKAAKPDFVALAKEYSDEKQSAEQGGEIGWLQEDQIRPEIKAEVVGLASGNVSAPIKMSDGWHFIKLLETKAAETRPLSEVREPLVQRLRAQRAEALQRAYLAQLLE 340          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: UPI000F8F2EA2 (peptidylprolyl isomerase n=1 Tax=Rhodomicrobium lacus TaxID=2498452 RepID=UPI000F8F2EA2)

HSP 1 Score: 315 bits (808), Expect = 1.270e-102
Identity = 159/263 (60.46%), Postives = 212/263 (80.61%), Query Frame = 1
Query:  229 AAPRVAEGE-VVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            +APR    E VVARIG RD+T ++VR+++ GL A +Q  L  DPA L+QAVR +LA+QL+LKEA  KKWQ+Q  V AQL R++D AIVE+YLQ VS PP++YP+EAEI +AYDANKTAF+VPR +RIAQIFV+L   AD   +++A++K+ ++Q +LKQPKADFAAIA E+++Q  TAERGGE+GWV E+Q+ PEI++QV GLS   ++E I+L DGWHI+KL+ETK +ETR LA VR  +VQ+LR+QRAEA+RRAY+A+V+E
Sbjct:   68 SAPRSTGSEDVVARIGDRDITISDVRSYLGGLSASDQAELVSDPARLNQAVRQILASQLLLKEATDKKWQEQAVVTAQLDRLRDNAIVETYLQAVSQPPANYPDEAEIQRAYDANKTAFVVPRLYRIAQIFVSLPATADKAAEEQAKRKIADIQARLKQPKADFAAIANEATEQNGTAERGGEIGWVAESQLLPEIRSQVAGLSESGVTEAIKLADGWHIVKLLETKPSETRPLATVRNQLVQRLRAQRAEALRRAYIAKVIE 330          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A4Q8QIQ7_9BRAD (Parvulin-like PPIase (Fragment) n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A4Q8QIQ7_9BRAD)

HSP 1 Score: 305 bits (781), Expect = 1.420e-99
Identity = 151/254 (59.45%), Postives = 206/254 (81.10%), Query Frame = 1
Query:  253 EVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            E VAR+GGRDV+++E+R F++ +G  ++ ALARDPALL+Q +R M A QLVLKEA  KKWQDQPAV AQL ++++ AI E+YLQ+ S PP +YP+EAEI K YDANK A ++PR+F +AQI+VAL   +D   ++KA+ KL ++Q KLKQPKADFA +A++++DQR+ A++GG+LGW+PE Q+ PEIK++VMG++   +SEPI+L DG+HI+KLIETK +ET  LADVR+ +VQ+LR+QRAE  RRAYLAR LE
Sbjct:    4 EPVARVGGRDVSSSEIRAFLAAVGPDQRAALARDPALLNQTLRAMFARQLVLKEATDKKWQDQPAVVAQLAKLREEAIFETYLQSASVPPENYPDEAEIQKTYDANKGALIMPRRFHLAQIYVALAEGSDAAAEEKAKAKLADIQAKLKQPKADFAQVAKDTTDQREQADKGGDLGWLPEPQLVPEIKSRVMGMAVNTVSEPIKLADGYHIVKLIETKPSETMPLADVRDTLVQRLRAQRAELNRRAYLARALE 257          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: UPI001CD39CAC (peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. BRP22 TaxID=2793821 RepID=UPI001CD39CAC)

HSP 1 Score: 306 bits (784), Expect = 2.890e-99
Identity = 151/255 (59.22%), Postives = 209/255 (81.96%), Query Frame = 1
Query:  250 GEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            GE VAR+ GRDV+++E+R F++ +G  ++ ALARDPALL+Q +R + A QL+LKEA  KKWQ+QPAV AQL ++++ AIVESYLQ+VS PP +YP+EAEI KAYDANK + ++PR+F +AQI+VAL   +D+ T++KA+ K+ ++Q KLKQPKADFA IA++++DQR+ A++GG+LGW+PE Q+ PEIKT+VM ++   +SEPI+L DG+HI+KLIETK +ET  LADVR+ +VQ+LR QRAE  RR Y+ARVLE
Sbjct:   56 GETVARVAGRDVSSSEIRTFLAAVGPDQRAALARDPALLNQTLRAIFARQLILKEAGDKKWQEQPAVVAQLAKLREEAIVESYLQSVSAPPENYPDEAEIQKAYDANKGSLIMPRRFHLAQIYVALAEGSDSATEEKAKAKVADIQAKLKQPKADFAQIAKDTTDQRELADKGGDLGWLPEPQLVPEIKTRVMEMAVNTVSEPIKLADGYHIVKLIETKPSETMPLADVRDGLVQRLRQQRAELNRRVYVARVLE 310          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: UPI001BCBA438 (peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp. dw_411 TaxID=2720082 RepID=UPI001BCBA438)

HSP 1 Score: 305 bits (781), Expect = 1.130e-98
Identity = 155/261 (59.39%), Postives = 208/261 (79.69%), Query Frame = 1
Query:  232 APRVAEGEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            AP+ A GEVVAR+G  +++T +VR +++ LG REQ ALA+DPALLSQAVRL+LAN+LV +E   KKW  QPAVAAQL R+++ A+VE YLQ+VS PP++YP + ++ KAYDAN++A L+PRQF++AQIF A   +AD  T+DKA+K L E+Q KL+ P ADFAAIA   +D ++    GG+LGWV ENQIRPEIK QVMGL+  A+SEP++LDDGWHI+KLI+TKA+ TR+L +VR+  VQQ+R++RA A+RR YLA +L+
Sbjct:   68 APK-ASGEVVARVGATEISTDDVRAYVTALGVREQAALAQDPALLSQAVRLLLANRLVSQEVLAKKWDQQPAVAAQLDRVRESAVVELYLQSVSTPPANYPSDDDLQKAYDANRSALLMPRQFQLAQIFFASPKDADKATEDKAKKALDEVQRKLRAPGADFAAIATAENDSKN----GGDLGWVAENQIRPEIKAQVMGLAKNAVSEPVRLDDGWHILKLIDTKASYTRTLPEVRDQFVQQMRAERAAALRRTYLAELLK 323          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A239LNC4_9BRAD (Parvulin-like PPIase n=1 Tax=Tardiphaga sp. OK246 TaxID=1855307 RepID=A0A239LNC4_9BRAD)

HSP 1 Score: 302 bits (774), Expect = 1.960e-97
Identity = 148/257 (57.59%), Postives = 211/257 (82.10%), Query Frame = 1
Query:  244 AEGEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            + GEVVAR+G  D++  ++R++I+ LG REQ ALA+DPALLSQAVR++L+N+LV++E   KKW  QPAVAAQL+++++ A+VE YLQ+VSNPP+++P + ++ K YDAN+ A LVPRQ+++AQIF+ +  +AD  T D A+KKL E+Q KLK   ADFAAIA+  S   D+AERGG+LG +PE+QIRPEI++QV+GL+ GA+SEPI LDDG+HII+L++TKAA TR+L +VR+ +V+Q+R++RA A+RRAYLA +L+
Sbjct:   82 SSGEVVARVGNSDISADDMRSYIAALGPREQAALAQDPALLSQAVRMLLSNRLVMQELAAKKWDQQPAVAAQLEKVRENAMVELYLQSVSNPPANFPSDEDLQKVYDANRAALLVPRQYQLAQIFIPMAKDADKATADAAKKKLDEVQKKLKVAGADFAAIARSDSGAGDSAERGGDLGLLPEDQIRPEIRSQVVGLAKGAVSEPITLDDGYHIIRLVDTKAAYTRTLPEVRDQLVRQIRTERAAALRRAYLAELLK 338          
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Match: A0A348G0R3_9HYPH (Parvulin-like PPIase n=1 Tax=Blastochloris tepida TaxID=2233851 RepID=A0A348G0R3_9HYPH)

HSP 1 Score: 301 bits (770), Expect = 2.630e-97
Identity = 154/269 (57.25%), Postives = 204/269 (75.84%), Query Frame = 1
Query:  208 AAVXXXXAAPRVAEGEVVARIGGRDVTTTEVRNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAVAAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQFRIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQRDTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIETKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLE 1014
            AA     A P     +V+AR+G  DVT  E+R  I  L AR+Q ALARDPALLSQ VR +LAN++VLKEA  +KW+ QPAVAAQ++R ++ AIVES+L+  + PP+ YP EA++   YDAN TAFLVPRQF+IAQIFVAL   AD   +DKAR+KL ++  KL+QP ADFAA+A+  SD   +AE+GGELGW+ E Q+RPEI +QV GL+  A++EPI+LDDGWH+IKL++TKA+ TR L +VRE +V++LR++R EA RRAY+A +L+
Sbjct:   33 AAPQTAPARPMTPASDVIARVGTSDVTADEIRAVIGSLDARQQAALARDPALLSQTVRALLANRVVLKEALARKWEQQPAVAAQVERAREAAIVESFLRAQTTPPADYPGEADLKTIYDANATAFLVPRQFQIAQIFVALPKGADKAAEDKARRKLDDVLKKLRQPGADFAALARSESDDTASAEKGGELGWLAEAQLRPEIASQVAGLAKSAVTEPIRLDDGWHVIKLMDTKASHTRPLEEVREPLVERLRAERTEANRRAYIAELLK 301          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14259.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S0G5C6_9BRAD5.320e-10865.49Parvulin-like PPIase n=2 Tax=Bradyrhizobiaceae Tax... [more]
A0A4P6HHY4_9HYPH2.540e-10663.12Parvulin-like PPIase n=3 Tax=Mesorhizobium TaxID=6... [more]
UPI001CE356821.740e-10461.18peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp... [more]
A0A345ZUU8_9HYPH3.180e-10361.81Parvulin-like PPIase n=1 Tax=Pseudolabrys taiwanen... [more]
UPI000F8F2EA21.270e-10260.46peptidylprolyl isomerase n=1 Tax=Rhodomicrobium la... [more]
A0A4Q8QIQ7_9BRAD1.420e-9959.45Parvulin-like PPIase (Fragment) n=5 Tax=Bradyrhizo... [more]
UPI001CD39CAC2.890e-9959.22peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp... [more]
UPI001BCBA4381.130e-9859.39peptidylprolyl isomerase n=1 Tax=Bradyrhizobium sp... [more]
A0A239LNC4_9BRAD1.960e-9757.59Parvulin-like PPIase n=1 Tax=Tardiphaga sp. OK246 ... [more]
A0A348G0R3_9HYPH2.630e-9757.25Parvulin-like PPIase n=1 Tax=Blastochloris tepida ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14259contigP-wetherbeei_contig14259:574..1665 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog196490.AUEZ01000061_gene1643
PFAMsRotamase,Rotamase_2
Model size1092
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1.36e-102
EggNOG OGsCOG0760@1|root,COG0760@2|Bacteria,1R5NR@1224|Proteobacteria,2TUV1@28211|Alphaproteobacteria,3K38G@41294|Bradyrhizobiaceae
DescriptionPPIC-type PPIASE domain
Cds size1092
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186015.3344362-CDS-P-wetherbeei_contig14259:573..16651683186015.3344362-CDS-P-wetherbeei_contig14259:573..1665Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14259 574..1665 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14259.2.1prot_P-wetherbeei_contig14259.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14259 574..1665 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14259.2.1

>prot_P-wetherbeei_contig14259.2.1 ID=prot_P-wetherbeei_contig14259.2.1|Name=mRNA_P-wetherbeei_contig14259.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=364bp
MNSQQTILRSGVRSIIGAVLASTLMCSTSLAQTPAQQPQPQRPRAVAPAA
PAAAAHPAAAAPARPAPAVAAVPAAAAAPRVAEGEVVARIGGRDVTTTEV
RNFISGLGAREQVALARDPALLSQAVRLMLANQLVLKEAEGKKWQDQPAV
AAQLQRIKDGAIVESYLQTVSNPPSSYPEEAEILKAYDANKTAFLVPRQF
RIAQIFVALETNADNETKDKARKKLTELQGKLKQPKADFAAIAQESSDQR
DTAERGGELGWVPENQIRPEIKTQVMGLSNGAMSEPIQLDDGWHIIKLIE
TKAAETRSLADVREVIVQQLRSQRAEAIRRAYLARVLEQSPPAINELALA
KVFNQQPDATPTR*
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mRNA from alignment at P-wetherbeei_contig14259:574..1665-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14259.2.1 ID=mRNA_P-wetherbeei_contig14259.2.1|Name=mRNA_P-wetherbeei_contig14259.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig14259:574..1665- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACTCCCAACAGACCATTCTGCGCTCCGGCGTTCGTTCGATCATTGG TGCTGTGCTCGCAAGTACATTGATGTGCTCGACGAGCCTGGCGCAGACAC CCGCACAGCAGCCTCAGCCGCAAAGGCCGCGCGCGGTCGCGCCGGCAGCG CCTGCTGCTGCGGCTCATCCCGCCGCAGCCGCCCCCGCACGTCCGGCACC TGCTGTTGCTGCCGTTCCGGCTGCAGCCGCAGCGCCGCGCGTTGCTGAGG GCGAGGTCGTTGCCCGTATAGGTGGCCGTGATGTCACCACGACGGAAGTC CGCAACTTTATCAGCGGTCTCGGCGCTCGGGAGCAGGTCGCACTCGCGCG AGATCCCGCATTGCTGAGCCAGGCGGTGCGGCTGATGCTCGCTAACCAGC TCGTGCTCAAGGAAGCCGAAGGAAAGAAGTGGCAGGATCAACCGGCCGTC GCCGCTCAATTGCAGCGCATCAAGGATGGTGCGATCGTCGAATCCTACCT GCAGACGGTTTCAAATCCACCTTCAAGTTATCCTGAGGAAGCCGAAATTC TAAAGGCTTACGACGCCAACAAGACTGCATTCCTTGTTCCACGCCAGTTC CGGATCGCTCAGATTTTCGTGGCGCTTGAAACCAATGCGGATAACGAAAC CAAGGACAAAGCTCGCAAGAAGCTCACCGAGCTCCAAGGCAAGCTCAAGC AACCCAAGGCCGACTTCGCGGCGATCGCCCAGGAAAGTTCCGACCAGCGC GATACTGCGGAGCGTGGTGGAGAACTGGGGTGGGTTCCGGAGAACCAGAT TCGTCCGGAGATCAAGACACAGGTGATGGGTCTCTCGAACGGTGCGATGA GCGAACCGATCCAGCTCGACGATGGATGGCACATCATCAAGCTGATAGAG ACGAAAGCAGCTGAAACGCGGTCCTTGGCCGATGTTCGGGAAGTGATTGT TCAGCAGCTCCGTTCGCAACGGGCAGAGGCCATCCGGCGTGCCTATCTCG CGCGGGTTCTGGAACAGAGCCCCCCCGCGATCAATGAACTCGCGCTGGCC AAGGTGTTCAATCAGCAGCCCGACGCGACTCCGACCCGGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14259:574..1665-

>mRNA_P-wetherbeei_contig14259.2.1 ID=mRNA_P-wetherbeei_contig14259.2.1|Name=mRNA_P-wetherbeei_contig14259.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig14259:574..1665- (Phaeothamnion wetherbeei SAG_119_79)
ATGAACTCCCAACAGACCATTCTGCGCTCCGGCGTTCGTTCGATCATTGG
TGCTGTGCTCGCAAGTACATTGATGTGCTCGACGAGCCTGGCGCAGACAC
CCGCACAGCAGCCTCAGCCGCAAAGGCCGCGCGCGGTCGCGCCGGCAGCG
CCTGCTGCTGCGGCTCATCCCGCCGCAGCCGCCCCCGCACGTCCGGCACC
TGCTGTTGCTGCCGTTCCGGCTGCAGCCGCAGCGCCGCGCGTTGCTGAGG
GCGAGGTCGTTGCCCGTATAGGTGGCCGTGATGTCACCACGACGGAAGTC
CGCAACTTTATCAGCGGTCTCGGCGCTCGGGAGCAGGTCGCACTCGCGCG
AGATCCCGCATTGCTGAGCCAGGCGGTGCGGCTGATGCTCGCTAACCAGC
TCGTGCTCAAGGAAGCCGAAGGAAAGAAGTGGCAGGATCAACCGGCCGTC
GCCGCTCAATTGCAGCGCATCAAGGATGGTGCGATCGTCGAATCCTACCT
GCAGACGGTTTCAAATCCACCTTCAAGTTATCCTGAGGAAGCCGAAATTC
TAAAGGCTTACGACGCCAACAAGACTGCATTCCTTGTTCCACGCCAGTTC
CGGATCGCTCAGATTTTCGTGGCGCTTGAAACCAATGCGGATAACGAAAC
CAAGGACAAAGCTCGCAAGAAGCTCACCGAGCTCCAAGGCAAGCTCAAGC
AACCCAAGGCCGACTTCGCGGCGATCGCCCAGGAAAGTTCCGACCAGCGC
GATACTGCGGAGCGTGGTGGAGAACTGGGGTGGGTTCCGGAGAACCAGAT
TCGTCCGGAGATCAAGACACAGGTGATGGGTCTCTCGAACGGTGCGATGA
GCGAACCGATCCAGCTCGACGATGGATGGCACATCATCAAGCTGATAGAG
ACGAAAGCAGCTGAAACGCGGTCCTTGGCCGATGTTCGGGAAGTGATTGT
TCAGCAGCTCCGTTCGCAACGGGCAGAGGCCATCCGGCGTGCCTATCTCG
CGCGGGTTCTGGAACAGAGCCCCCCCGCGATCAATGAACTCGCGCTGGCC
AAGGTGTTCAATCAGCAGCCCGACGCGACTCCGACCCGGTAA
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