mRNA_P-wetherbeei_contig14253.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A1F3YCC0_9PROT (Thymidylate kinase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YCC0_9PROT) HSP 1 Score: 200 bits (509), Expect = 5.130e-63 Identity = 96/135 (71.11%), Postives = 109/135 (80.74%), Query Frame = 1
Query: 10 RGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
RG+FIT EGVDGAGKSTH+ W A LR++G +V+VTREPGG+PLAEKLR LVL EPMD + ETLL+F AR DH++K I PAL G WVVCDRFTDAT AYQGGGKGV L+ LA+ VHPDL PD TLVFDCPY
Sbjct: 8 RGRFITLEGVDGAGKSTHIPWIAERLRASGREVVVTREPGGTPLAEKLRALVLAEPMDPLAETLLMFAARADHVRKVILPALERGAWVVCDRFTDATAAYQGGGKGVSGDLLQRLAQSVHPDLTPDQTLVFDCPY 142
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A522VMY1_9PROT (Thymidylate kinase n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A522VMY1_9PROT) HSP 1 Score: 192 bits (489), Expect = 5.430e-60 Identity = 95/134 (70.90%), Postives = 108/134 (80.60%), Query Frame = 1
Query: 13 GKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
G+FIT EGVDGAGKSTHVE A LR AGH+VLVTREPGG+PLAEKLR L+L + +DA+ ETLL+F AR DH+ + I PAL AG WVVCDRFTDATLAYQGGGKGV + I LA++ HP LKPD TLVFDC Y
Sbjct: 8 GRFITLEGVDGAGKSTHVEAIAGRLRGAGHEVLVTREPGGTPLAEKLRALLLADAIDALAETLLMFAARADHVARVIRPALTAGKWVVCDRFTDATLAYQGGGKGVARSAIEQLAQMTHPGLKPDLTLVFDCSY 141
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A0S8B7S8_9PROT (Thymidylate kinase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B7S8_9PROT) HSP 1 Score: 192 bits (487), Expect = 9.940e-60 Identity = 94/135 (69.63%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 10 RGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
RGKFIT EGVDG+GKSTH+ W L + GH VL TREPGG+PLAE LRELVLH PMD V E LL+F AR DH+++ I PAL AG WVVCDRFTDATLAYQG GKGV LI LA+ HP L PD TLVFDCPY
Sbjct: 4 RGKFITLEGVDGSGKSTHLAWVEQLLHARGHDVLRTREPGGTPLAEALRELVLHSPMDGVCEVLLMFAARADHVRQVIRPALEAGRWVVCDRFTDATLAYQGAGKGVPAQLIRGLAEAAHPGLWPDLTLVFDCPY 138
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A1F4E3U1_9PROT (Thymidylate kinase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4E3U1_9PROT) HSP 1 Score: 183 bits (465), Expect = 2.390e-56 Identity = 90/138 (65.22%), Postives = 106/138 (76.81%), Query Frame = 1
Query: 1 SDMRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
+D RG IT EGVDGAGKSTHVE A LR+AG +VLVTREPGG+PLAEKLR L+L + +D ETLL+F AR DH+ + I PAL G WVVCDRFTDAT+AYQGGGKG+ LI LA++ HP L+PD TL+FDC Y
Sbjct: 4 ADGRGLLITLEGVDGAGKSTHVEEIAARLRNAGREVLVTREPGGTPLAEKLRALLLADAIDPYPETLLMFAARADHVARVIRPALERGKWVVCDRFTDATIAYQGGGKGIPRPLIDRLAEVAHPGLQPDLTLIFDCSY 141
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A536XR32_9PROT (Thymidylate kinase (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536XR32_9PROT) HSP 1 Score: 181 bits (458), Expect = 4.580e-56 Identity = 83/133 (62.41%), Postives = 104/133 (78.20%), Query Frame = 1
Query: 16 KFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
KF+T EGVDGAGKSTH+E+ A+ +R+ G V+VTREPGG+ LAEKLR+ +L +PM + ETLL+F AR DH+++ I PALA+G WV+CDRFTDAT AYQG GKGV LI LA+ HP L+P TL+FDCPY
Sbjct: 2 KFLTLEGVDGAGKSTHIEFIADAVRTKGAHVIVTREPGGTELAEKLRQAILEQPMSPIVETLLIFAARSDHVERVIKPALASGQWVICDRFTDATAAYQGAGKGVSMDLIARLAEAAHPGLQPSRTLIFDCPY 134
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A2V1K442_9BURK (Thymidylate kinase n=2 Tax=Alcaligenaceae TaxID=506 RepID=A0A2V1K442_9BURK) HSP 1 Score: 182 bits (463), Expect = 6.970e-56 Identity = 88/135 (65.19%), Postives = 105/135 (77.78%), Query Frame = 1
Query: 7 MRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCP 411
+RG+FIT EGVDGAGKSTHV+W +LR AG V+ TREPGG+PL EKLREL+L E M TE LL+F AR++HL++ I PALAAG WVVCDRFTDAT AYQGGG+ + T + AL VHPDL+PD TL+FD P
Sbjct: 12 LRGRFITLEGVDGAGKSTHVDWIVAQLRDAGLDVISTREPGGTPLGEKLRELLLGEEMTLATEALLMFAARNEHLEQVIRPALAAGHWVVCDRFTDATFAYQGGGRSLGTQRVAALEAWVHPDLQPDLTLLFDVP 146
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A495WGT4_9RHOO (Thymidylate kinase n=4 Tax=Azonexaceae TaxID=2008795 RepID=A0A495WGT4_9RHOO) HSP 1 Score: 181 bits (460), Expect = 1.250e-55 Identity = 90/135 (66.67%), Postives = 104/135 (77.04%), Query Frame = 1
Query: 7 MRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCP 411
MRGKFITFEG+DGAGKS+HVEW A LR G VLVTREPGG+ L EKLREL+L E M TETLL+F AR +HL +RI PALA G WV+CDRF+DAT AYQGGG+G+D A AL + VH L+PD TL+FD P
Sbjct: 1 MRGKFITFEGIDGAGKSSHVEWLAETLRQRGLSVLVTREPGGTALGEKLRELLLSEAMHLETETLLMFAARREHLAQRIEPALARGEWVICDRFSDATWAYQGGGRGLDKAKFLALERWVHEHLQPDLTLLFDLP 135
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A1J5BQY0_9PROT (Thymidylate kinase n=3 Tax=Betaproteobacteria TaxID=28216 RepID=A0A1J5BQY0_9PROT) HSP 1 Score: 181 bits (459), Expect = 1.720e-55 Identity = 86/135 (63.70%), Postives = 104/135 (77.04%), Query Frame = 1
Query: 7 MRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCP 411
M GKFITFEG+DGAGKSTH+ FA L G +V+ TREPGG+PL E+LREL+LHE M TETLL+F AR++HL++ I PAL G WV+CDRFTDAT AYQGGG+G+D I L + VHPDL+PD T+VFD P
Sbjct: 1 MTGKFITFEGIDGAGKSTHLVRFAERLAERGIEVVTTREPGGTPLGERLRELLLHESMSLATETLLMFAARNEHLERLIRPALREGRWVLCDRFTDATFAYQGGGRGLDPGRIATLEEWVHPDLQPDLTVVFDVP 135
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A257DEE0_9BURK (Thymidylate kinase n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DEE0_9BURK) HSP 1 Score: 179 bits (455), Expect = 6.750e-55 Identity = 88/135 (65.19%), Postives = 106/135 (78.52%), Query Frame = 1
Query: 7 MRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCP 411
M G+FITFEG+DGAGKS+H+E A LR+AGH VLVTREPGG+PLAE+LRE++LH PMD +TE LLVF AR +H+++ I PALA G V+CDRFTDAT AYQG G+G D A + AL VH DL+PD TL FD P
Sbjct: 1 MPGRFITFEGIDGAGKSSHIEPLAARLRAAGHTVLVTREPGGTPLAERLREMLLHTPMDGLTEALLVFAARRNHVQQVIAPALARGDTVLCDRFTDATFAYQGAGRGFDVAQLTALESWVHGDLQPDLTLWFDLP 135
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Match: A0A536WSM1_9PROT (Thymidylate kinase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536WSM1_9PROT) HSP 1 Score: 179 bits (454), Expect = 9.010e-55 Identity = 83/133 (62.41%), Postives = 103/133 (77.44%), Query Frame = 1
Query: 16 KFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRELVLHEPMDAVTETLLVFTARDDHLKKRIFPALAAGTWVVCDRFTDATLAYQGGGKGVDTALIGALAKIVHPDLKPDCTLVFDCPY 414
KF+T EGVDGAGKSTH+E+ A+ +R+ G V+VTREPGG+ LAEKLR +L +PM + ETLL+F AR DH+++ I PALA+G WV+CDRFTDAT AYQG GKGV LI LA+ HP L+P TL+FDCPY
Sbjct: 2 KFLTLEGVDGAGKSTHIEFIADAVRTKGAHVIVTREPGGTELAEKLRHAILEQPMSPIVETLLIFAARADHVERVIKPALASGQWVICDRFTDATAAYQGAGKGVSMDLIARLAEAAHPGLQPSRTLIFDCPY 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14253.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14253.1.1 >prot_P-wetherbeei_contig14253.1.1 ID=prot_P-wetherbeei_contig14253.1.1|Name=mRNA_P-wetherbeei_contig14253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp MRGKFITFEGVDGAGKSTHVEWFANELRSAGHQVLVTREPGGSPLAEKLRback to top mRNA from alignment at P-wetherbeei_contig14253:1..414- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14253.1.1 ID=mRNA_P-wetherbeei_contig14253.1.1|Name=mRNA_P-wetherbeei_contig14253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig14253:1..414- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14253:1..414- >mRNA_P-wetherbeei_contig14253.1.1 ID=mRNA_P-wetherbeei_contig14253.1.1|Name=mRNA_P-wetherbeei_contig14253.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig14253:1..414- (Phaeothamnion wetherbeei SAG_119_79)back to top |