mRNA_P-wetherbeei_contig1425.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: D8LAY6_ECTSI (Nephroretinin 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI) HSP 1 Score: 219 bits (559), Expect = 2.760e-62 Identity = 129/257 (50.19%), Postives = 155/257 (60.31%), Query Frame = 1
Query: 1 PMAAVVGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT-----DPTGRA---ADLDLEATDPLALHELTLQFAGLRA--------PRSD----------------------APLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
P A VGG AP LSRASRTRLSRHGF DVM+D+VD DP R DLDLE TDPLA HE+TLQFA R R+D + +P S+YFTYQ + C P +TERM LRP G D Y+ + G G + L ILVR+ RYGRDEPSL LRHS+DTT++QPFEA AFA Y+A TL+VDVWD DALMH+GT+A+ LR L+RQ++ VVK A EYE++
Sbjct: 822 PPAVTVGGFAPLPQGLSRASRTRLSRHGFTDVMKDTVDSFAQTSGFDPLRRQNIPIDLDLEVTDPLAKHEVTLQFAAFRGLSSGGSGGDRTDNSSHRSVGGGADVWHEGGGDMVSSMPTSLYFTYQFYTCLPTRTERMLLRPD------------GPKDRLYQAEGG-GVSRLSILVRDGRYGRDEPSLGLRHSIDTTMMQPFEAHAFATYMAGSTLFVDVWDADALMHIGTLAMPLRELMRQQKGVVKTAMEYEIV 1065
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A835YU49_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA) HSP 1 Score: 188 bits (478), Expect = 2.090e-51 Identity = 113/257 (43.97%), Postives = 148/257 (57.59%), Query Frame = 1
Query: 1 PMAAVVGGPAPA-APELSRASRTRLSRHGFADVMQDS---------------------------------------VDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYE 651
P AAVVGG + A A +LSRASRTRLSRHG++DVM+D+ P + ++ LE +DPLALHELTLQFAG R PR+ LP +V+ TYQ + C P++TER+ L P A G+ + PYR + G+ + L LVRE YGRDEP+ AL+H VD + +QP EA FA Y+A ++L+VDVWD DA +HLGT+AV LR L+RQ + V K A E+E
Sbjct: 1126 PTAAVVGGGSGAGAHDLSRASRTRLSRHGYSDVMRDTSHREEAVTLMLPLLSLTPLLXXXXXXXXXXXXXXXXXXXXXXXAQPIAKRVNIGLELSDPLALHELTLQFAGYRCPRAAMSLPAAVHLTYQFYTCAPLRTERLRLLPDA---------PRGAREGPYRAEEGSHSPCL--LVREECYGRDEPAHALKHRVDCSYMQPSEAAHFARYMATKSLFVDVWDADAQLHLGTVAVPLRTLMRQGKAVAKHAGEFE 1371
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S3ZVW1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVW1_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.000e-42 Identity = 98/217 (45.16%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 16 VGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT--DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVREN-RYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
VGG P LSRA R+RL+RHG+ V D +P DLDLEA+DPLALHE+T+QFA RA LP +VYFT+Q + P +TER+ L A G DA R+LVRE R G DEP L L+ +VD P EA FA YLA + L+VDVWD D+ +H+GT A+ L LLRQR PV K+A EY V+
Sbjct: 436 VGGSKPQGDSLSRAQRSRLARHGYPTVQLDDSRALQPGNPEMVKYDLDLEASDPLALHEITVQFAAFRANTPSQVLPRAVYFTFQFYTLPPTRTERLRLASRAPEESKVDRGVEAPNDAS------------RLLVRETGRRGSDEPPLILKFAVDCNTGAPNEARFFAEYLATKVLHVDVWDADSRLHVGTSAIPLDRLLRQRAPVAKVAAEYSVV 640
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S3ZVW2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVW2_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.010e-42 Identity = 98/217 (45.16%), Postives = 121/217 (55.76%), Query Frame = 1
Query: 16 VGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHT--DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVREN-RYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
VGG P LSRA R+RL+RHG+ V D +P DLDLEA+DPLALHE+T+QFA RA LP +VYFT+Q + P +TER+ L A G DA R+LVRE R G DEP L L+ +VD P EA FA YLA + L+VDVWD D+ +H+GT A+ L LLRQR PV K+A EY V+
Sbjct: 726 VGGSKPQGDSLSRAQRSRLARHGYPTVQLDDSRALQPGNPEMVKYDLDLEASDPLALHEITVQFAAFRANTPSQVLPRAVYFTFQFYTLPPTRTERLRLASRAPEESKVDRGVEAPNDAS------------RLLVRETGRRGSDEPPLILKFAVDCNTGAPNEARFFAEYLATKVLHVDVWDADSRLHVGTSAIPLDRLLRQRAPVAKVAAEYSVV 930
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S2C1Z8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Z8_9STRA) HSP 1 Score: 159 bits (401), Expect = 4.290e-41 Identity = 97/218 (44.50%), Postives = 129/218 (59.17%), Query Frame = 1
Query: 13 VVGGPAPAAPELSRASRTRLSRHGFADV-MQDSVDGHT-DPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRE-NRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
+VGGPAP A EL+RAS+ RLSRHGF+ V + D+ + R + +D E D A +E+ FA RAP + PLP S+YF+Y ++ +PV+TER LR G S S P R+LV++ R GRD+ + +H++DT+ + FEA F YL RTLYVDVWDGDA +H+GT AV LR LLRQ RPVVK EY+V+
Sbjct: 180 LVGGPAPLAKELTRASQARLSRHGFSTVALHDAAQAQALEELSRPSIMD-ELHDTRARNEIVFCFAAYRAPARNEPLPSSIYFSYHFFDRKPVRTERGLLRGE---------GASASNAIP------------RVLVQDMGRRGRDDAPVTTKHTIDTSEMTVFEARQFYEYLGSRTLYVDVWDGDAQIHIGTAAVPLRQLLRQGRPVVKKTLEYDVV 375
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A7S2QW27_9STRA (Hypothetical protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW27_9STRA) HSP 1 Score: 143 bits (361), Expect = 1.000e-35 Identity = 87/226 (38.50%), Postives = 125/226 (55.31%), Query Frame = 1
Query: 1 PMAAVVGGPAPAAPELSRASRTRLSRHGFAD-VMQDSVDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRE------NRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
P A + AP +SRA+RTRL RHGF + V+++ D + + ++D E D HE+TLQFA A APLP S+YFT+Q ++ +P +TER+ LR ++ R D R+L RE N Y PS L+ ++D +++ EA+ F +YL ++LYVDVWDGDALMH GT+A+ L+ L+RQ + KLAR Y+VI
Sbjct: 795 PNAMAINNSAPLDNPMSRAARTRLGRHGFFEKVLENYDDAQSADPSTSYNIDTELADSRLRHEITLQFAAFNAVEKSAPLPNSLYFTFQFYDKEPTRTERLVLRKSS------------------RSDEDDHTV-ARVLCREKPGKGSNEYS---PSRTLKFTIDLSMIGVSEAKNFVSYLKNKSLYVDVWDGDALMHYGTIAIPLKKLMRQGKNTSKLARVYDVI 998
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A485L781_9STRA (Aste57867_17057 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L781_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.760e-27 Identity = 79/211 (37.44%), Postives = 110/211 (52.13%), Query Frame = 1
Query: 43 ELSRASRTRLSRHGFADVMQDSV----DGHTDPTGRAADLDLEATDPLALHELTLQFAGLR--APRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
ELSRAS++ L+RHGF D + SV P + E D + L ++ +QFA LR A S +P P SV+FT+Q + +P +TER+ + PT A +L R++ +PSLAL V TT P EA AFA+YL + L VDVWDGD+L+HLG++++ L L+RQ V K EYEV+
Sbjct: 706 ELSRASKSLLTRHGFYDAVTTSVAEPRPSTKPPVAATKSIGAELQDGMNLLDIQIQFAALRTMAVPSSSP-PASVFFTFQFYTFEPTRTERLVVTPTQ-------------------------APGTFLLCRDHA---KKPSLALHFEVHTTKHCPLEAAAFASYLLTKPLVVDVWDGDSLLHLGSLSIPLHVLMRQGLRVKKHHAEYEVV 887
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A5D6XWL2_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWL2_9STRA) HSP 1 Score: 115 bits (287), Expect = 7.830e-26 Identity = 75/228 (32.89%), Postives = 109/228 (47.81%), Query Frame = 1
Query: 43 ELSRASRTRLSRHGFADVMQDSVDGHTD---------------------PTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGA-AELRILVRENRYGRDEPSLALRHSVDTTL-LQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
ELSRASRT L+R+GF D S H P + L++E D HE+ FA R+ ++ +P +YFT+Q + P +TE + L D+GAG ++ +L+RE+ + PSLA++ +DTT+ L P E +FA YL R+LYVDVWD D+L +GT A+ L LLRQ + K E +V+
Sbjct: 780 ELSRASRTLLTRYGFMDAHDTSAVSHEAADLPSSSQQPIAGTGGVARALPPASSKSLEVELNDAYKAHEVRFHFAAYRSLGAEPLVPTRMYFTFQFYTFPPTRTETLRLSKAF--------------------DNGAGGESQTALLMRESPASK--PSLAIQFDIDTTVTLDPLEPRSFAEYLLQRSLYVDVWDADSLFQIGTFAIPLHELLRQGSGIKKFQAEADVV 985
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: W4H6W9_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6W9_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.040e-25 Identity = 80/221 (36.20%), Postives = 110/221 (49.77%), Query Frame = 1
Query: 43 ELSRASRTRLSRHGFADV-----MQD--------SVDGHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSD----APLPESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEV 654
ELSRAS++ L+RHGF D M+D S G P + E D L L E+T QFA RA +PLP S+YFT+Q + +P K+ER+ + T AA +L R++ +PSLA++ + TT P EA AFA YL ++L+VDVWDG++L+ LG+M V L L+RQ V K E+EV
Sbjct: 686 ELSRASKSLLTRHGFYDTVTSVPMEDNNRPNQHSSASGMHHPLPPLKTVADELRDGLNLLEITFQFAAFRALSESGGQPSPLPTSMYFTFQFYTFEPTKSERLLVTSTP-------------------------AAATYLLCRDHA---KKPSLAIQFDLHTTKQCPLEAAAFATYLLTKSLHVDVWDGESLLPLGSMTVPLHDLMRQGNRVKKYHAEFEV 878
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Match: A0A482RWW6_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RWW6_9ARCH) HSP 1 Score: 113 bits (282), Expect = 3.570e-25 Identity = 72/239 (30.13%), Postives = 115/239 (48.12%), Query Frame = 1
Query: 46 LSRASRTRLSRHGFADVMQDSVD-----------------------------GHTDPTGRAADLDLEATDPLALHELTLQFAGLRAPRSDAPL------PESVYFTYQLWNCQPVKTERMELRPTAGGRRNSSGGYSGSGDAPYRPDSGAGAAELRILVRENRYGRDEPSLALRHSVDTTLLQPFEAEAFAAYLACRTLYVDVWDGDALMHLGTMAVSLRPLLRQRRPVVKLAREYEVI 657
++R ++TRL+RHG DV+ D+ D + + G+ DL EA D L + E+ +QF G RA ++ P S+Y ++Q + CQP +TE M L DA D G+ + +LVR+ R +P L LR+ VD + +E+ FA YLA +++Y+DVWD D++++LGT+ + + +RQ P VK A E ++I
Sbjct: 561 MTRGAKTRLNRHGITDVITDTADYFLQQEEAYKDASAHGYQRSVLKKPSSILNNYNAMGQRVDLYKEAEDELNISEINIQFVGYRAAVAENSTDLVFHAPRSIYCSFQFYACQPTRTEAMSLL-----------------DA----DKGS----VHVLVRDEPSARRDPPLVLRYIVDNSKTSMYESYEFAGYLAQKSIYIDVWDADSMIYLGTVGIPCKLFMRQGAPYVKHAVEVDII 774 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1425.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1425.6.1 >prot_P-wetherbeei_contig1425.6.1 ID=prot_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=218bp MAAVVGGPAPAAPELSRASRTRLSRHGFADVMQDSVDGHTDPTGRAADLDback to top mRNA from alignment at P-wetherbeei_contig1425:6420..7076+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1425.6.1 ID=mRNA_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig1425:6420..7076+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1425:6420..7076+ >mRNA_P-wetherbeei_contig1425.6.1 ID=mRNA_P-wetherbeei_contig1425.6.1|Name=mRNA_P-wetherbeei_contig1425.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=654bp|location=Sequence derived from alignment at P-wetherbeei_contig1425:6420..7076+ (Phaeothamnion wetherbeei SAG_119_79)back to top |