mRNA_P-wetherbeei_contig14230.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A7C2YS85_9PROT (tRNA pseudouridine synthase A n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YS85_9PROT) HSP 1 Score: 357 bits (917), Expect = 5.800e-122 Identity = 174/250 (69.60%), Postives = 194/250 (77.60%), Query Frame = 1
Query: 4 RIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPA 753
R+ALG+EY+GA FCGWQTQP GCAVQD LE AL+ +AGE + T+CAGRTDAGVHAL QVVHFD A RP SAWVRGTN +P G AV W V +DF ARYSA+ER YRYVL N VRPA GRV W H PLDV RM AA L+GEHDFSAFRS+ CQA+SPVRELRRL I R GDYV+FD AANA+LHHMVRNIVG+LVYVG G+H P WL VL++ +R AAPT EAAGLYL V YDA W LPA
Sbjct: 11 RVALGLEYDGAAFCGWQTQPDGCAVQDRLEAALSEVAGEPVTTVCAGRTDAGVHALGQVVHFDTRAARPLSAWVRGTNALLPPGVAVNWGQGVRSDFHARYSARERCYRYVLLNRAVRPAAEHGRVGWFHLPLDVERMRVAARALIGEHDFSAFRSSACQARSPVRELRRLDIERRGDYVLFDFAANAYLHHMVRNIVGALVYVGKGKHPPEWLRAVLENRDRTRAAPTFEAAGLYLTRVVYDAVWALPA 260
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A1F4DRW3_9PROT (tRNA pseudouridine synthase A n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DRW3_9PROT) HSP 1 Score: 356 bits (914), Expect = 1.210e-121 Identity = 174/256 (67.97%), Postives = 199/256 (77.73%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPALARRA 768
MRIALGIEY+G+ FCGWQTQP+GCA QD LE AL+ IAGE++AT+CAGRTDAGVHALAQVVHFD AERP +AWVRG+N +PS AVTW ++ F ARYSA ER YRYVL N PVRPA + RV W H PL + + +AA L+GEHDFSAFRS+ECQA+SPVR LRRL I R GDYVVF+ ANAFLHHMVRNIVG L+YVG G+H PAW+ DVL +R AAPT +AAGLYLA V YDA WGLP R A
Sbjct: 1 MRIALGIEYDGSAFCGWQTQPAGCAAQDKLESALSQIAGERVATVCAGRTDAGVHALAQVVHFDTVAERPVTAWVRGSNALLPSALAVTWAKVMSDQFHARYSAHERCYRYVLLNRPVRPAADRARVGWFHLPLALDNIQSAARLLIGEHDFSAFRSSECQARSPVRHLRRLDIERRGDYVVFEFCANAFLHHMVRNIVGCLIYVGKGKHPPAWVGDVLAGRDRRQAAPTFDAAGLYLARVVYDAAWGLPEAPRAA 256
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A7C3NS72_9PROT (tRNA pseudouridine synthase A n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3NS72_9PROT) HSP 1 Score: 352 bits (903), Expect = 5.330e-120 Identity = 176/259 (67.95%), Postives = 193/259 (74.52%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPALARRAWFE 777
+RIALG+EY+G+ FCGWQTQP GCAVQDALERAL IAGE +AT+CAGRTDAGVHAL QVVHFD A RP SAWVRG N +P AVTW VA DF ARYSAQ R YRYVL NH VRPA + RV W H PL++ M AA LLGEHDFSAFRSAECQA++PVR L RL I R GDYVVFDL ANAFLHHMVRNIVG LV+VG G P W+ +VL +R AAPT AAGLYLA V YDA+W LPA R E
Sbjct: 2 VRIALGVEYDGSRFCGWQTQPDGCAVQDALERALGEIAGEPVATVCAGRTDAGVHALGQVVHFDTAARRPGSAWVRGVNVLLPPACAVTWSQEVAGDFHARYSAQSRGYRYVLLNHAVRPAADHTRVGWFHVPLELEPMRRAARLLLGEHDFSAFRSAECQARTPVRTLSRLDIARRGDYVVFDLRANAFLHHMVRNIVGCLVHVGKGGCPPEWIGEVLAGRDRTRAAPTFPAAGLYLARVDYDARWSLPAAPRSTLLE 260
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A5C7EVA1_9PROT (tRNA pseudouridine synthase A n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A5C7EVA1_9PROT) HSP 1 Score: 348 bits (893), Expect = 2.330e-118 Identity = 169/250 (67.60%), Postives = 193/250 (77.20%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLP 750
MRIALG+EY+G+ FCGWQ+Q GC+VQDALERAL +AG + AGRTDAGVHAL QVVHFD N RP +AWVRGTN +PS AV W PVA DF AR+SA+ERSYRY+L NHPVRPA GRV W H PLDVARM AAA +L+GEHDFSAFRS+ECQA++PVR L RL +RR G VVFDL ANAFLHHMVRNIVG LVYVG G+H P WL +VL +RA APT AAGLY + V Y+ +WGLP
Sbjct: 1 MRIALGLEYDGSRFCGWQSQAEGCSVQDALERALGEVAGHPVRVAAAGRTDAGVHALMQVVHFDTNVTRPETAWVRGTNAHLPSSVAVLWARPVAEDFHARFSARERSYRYLLLNHPVRPAAAHGRVGWFHQPLDVARMQAAARYLVGEHDFSAFRSSECQARTPVRTLSRLEVRRVGALVVFDLWANAFLHHMVRNIVGCLVYVGKGKHPPEWLQEVLQGRDRARGAPTFPAAGLYFSGVRYEPRWGLP 250
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A0S8CB40_9PROT (tRNA pseudouridine synthase A n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8CB40_9PROT) HSP 1 Score: 347 bits (889), Expect = 7.180e-118 Identity = 169/260 (65.00%), Postives = 196/260 (75.38%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPALARRAWFEE 780
MRIALG+EY+G+ FCGWQTQP GCAVQD LERAL IAG +AT CAGRTDAGVHALAQVVHFD A RPASAW+RGTN +P AVTW+ +A+DF ARYSA RSYRY+L N PVRPA+ RV W H PLD+ +M AA L+GEHDFSAFRS+ECQ++SPVR L+RL + R G YVVFD+ ANAFLHHMVRNIVG LVYVG G+ P WL ++L +R APT AAGLYLA V Y+ +WGL R A E+
Sbjct: 1 MRIALGLEYDGSRFCGWQTQPEGCAVQDTLERALREIAGTPVATTCAGRTDAGVHALAQVVHFDTEARRPASAWMRGTNALLPPPLAVTWVREIASDFHARYSALSRSYRYILLNDPVRPAVGHARVGWFHLPLDLEKMCDAARLLIGEHDFSAFRSSECQSRSPVRTLKRLELSRRGSYVVFDVQANAFLHHMVRNIVGCLVYVGKGKFPPEWLGELLSGRDRTRGAPTFPAAGLYLARVEYEPRWGLAESPRAAIMEQ 260
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A1F3ZRV0_9PROT (tRNA pseudouridine synthase A n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZRV0_9PROT) HSP 1 Score: 345 bits (885), Expect = 3.120e-117 Identity = 172/250 (68.80%), Postives = 194/250 (77.60%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLP 750
MRIALGIEY+G+ FCGWQTQ +GCAVQD LE ALA IAG + T+CAGRTDAGVHAL QVVH D A+RP +AWVRG N P+ AVTW V +F ARYSA+ERSYRYVL N VRPA ++GRV WCH PLD+ RM AA+ L+GEHDFSAFRS+ECQA+SPVR L R+ IRRSG+YVVFDL+ANAFLHHMVRNIVG LVYVG GR P WLA VL +R AAPT A+GLYLA V YD W LP
Sbjct: 1 MRIALGIEYDGSAFCGWQTQLAGCAVQDKLESALAQIAGSPVGTVCAGRTDAGVHALGQVVHLDPVADRPLNAWVRGVNALTPATLAVTWARAVGDEFHARYSARERSYRYVLLNRAVRPAADQGRVGWCHLPLDLERMRHAASALIGEHDFSAFRSSECQARSPVRNLVRIEIRRSGEYVVFDLSANAFLHHMVRNIVGCLVYVGGGRRPPEWLAAVLAGRDRTGAAPTFSASGLYLARVVYDPVWDLP 250
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A1Y0G4Y6_9PROT (tRNA pseudouridine synthase A n=1 Tax=Sulfuriferula sp. AH1 TaxID=1985873 RepID=A0A1Y0G4Y6_9PROT) HSP 1 Score: 342 bits (877), Expect = 5.140e-116 Identity = 164/249 (65.86%), Postives = 191/249 (76.71%), Query Frame = 1
Query: 4 RIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLP 750
RIALG+EYNG+ FCGWQ QP GC VQDALERAL+ IAG ++ + AGRTD GVHA Q+VHFD + ERP +AWVRG N +P G AV W V DF AR+SA RSYRY L NHPVRPALN G+V W HAPLD+ARM AA L+GEHDFSAFR+AECQA+SPVR LR+L + G+ VVF+L ANAFLHHMVRNIVG+LVYVG G++ P W+AD+L +R AAPT AAGL+L HV YDA WGLP
Sbjct: 3 RIALGLEYNGSQFCGWQHQPQGCGVQDALERALSQIAGHAVSVVAAGRTDTGVHATEQIVHFDVSIERPLTAWVRGANAFLPDGVAVLWAQLVGPDFHARFSAISRSYRYDLLNHPVRPALNAGQVGWYHAPLDIARMQQAAALLVGEHDFSAFRAAECQARSPVRVLRQLNVSGQGNLVVFELTANAFLHHMVRNIVGALVYVGQGKYPPDWIADLLQQRDRTRAAPTFAAAGLHLCHVEYDAMWGLP 251
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A4R3JYX5_9PROT (tRNA pseudouridine synthase A n=1 Tax=Sulfuritortus calidifontis TaxID=1914471 RepID=A0A4R3JYX5_9PROT) HSP 1 Score: 340 bits (872), Expect = 3.640e-115 Identity = 167/255 (65.49%), Postives = 196/255 (76.86%), Query Frame = 1
Query: 4 RIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPALARRA 768
RIALG+EY+G FCGWQTQP GCAVQDALE ALA + G ++TI AGRTDAGVHAL QVVHFD +RP SAW+RGTN +P G AV W V+ +F+ARY+A ER+YRYVL NHPVRPAL G+V W HAPLD A M AA HLLGEHDFSAFR+AECQAKSPVR+LR L + R GD+ V + ANAFLHH VRN+VG+LV+VG GR PAW+ +VL+S +R+ AA T A GLYL+ V YD KWGLPA R+
Sbjct: 4 RIALGLEYDGRLFCGWQTQPGGCAVQDALEAALAEVHGAPVSTIVAGRTDAGVHALNQVVHFDAVNDRPESAWLRGTNALLPPGVAVVWAKQVSEEFNARYAALERAYRYVLLNHPVRPALLAGKVGWVHAPLDQANMVEAAAHLLGEHDFSAFRAAECQAKSPVRQLRELNVVRHGDFFVLEFRANAFLHHQVRNMVGALVWVGLGRRSPAWVKEVLESRDRSQAAATFAADGLYLSAVRYDPKWGLPATVDRS 258
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: UPI00193B6171 (tRNA pseudouridine(38-40) synthase TruA n=1 Tax=Azospira restricta TaxID=404405 RepID=UPI00193B6171) HSP 1 Score: 339 bits (869), Expect = 6.870e-115 Identity = 164/252 (65.08%), Postives = 195/252 (77.38%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPAL 756
M+IAL +EY+G F GWQTQPSG VQDALE+AL+ IAGE IA +CAGRTDAGVHA QVVHF+C AERP SAWVRGTNT +P AV W PVA DF AR+SA+ R YRY+L N P RP L GRV W H PLD+A M AAA LLGEHDFSAFR+AECQAKSPV+ELR + ++GD+VVFD A+AFLHHMVRN+VG+LVY+G G+H PAW+ ++L+ +R AAPT GLYL+ +SY+A WGLP L
Sbjct: 1 MKIALCLEYDGRAFHGWQTQPSGNTVQDALEKALSEIAGEPIAVVCAGRTDAGVHASCQVVHFECLAERPLSAWVRGTNTLLPDAVAVRWAQPVADDFHARFSARGRRYRYLLLNRPQRPGLTHGRVGWFHQPLDLAAMQAAAARLLGEHDFSAFRAAECQAKSPVKELREAWVWQAGDHVVFDFEASAFLHHMVRNLVGTLVYIGKGKHSPAWIDELLECRDRKRAAPTFSPDGLYLSGISYEAHWGLPEL 252
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Match: A0A6L5JV31_RHOTE (tRNA pseudouridine synthase A n=1 Tax=Rhodocyclus tenuis TaxID=1066 RepID=A0A6L5JV31_RHOTE) HSP 1 Score: 338 bits (867), Expect = 2.250e-114 Identity = 164/253 (64.82%), Postives = 193/253 (76.28%), Query Frame = 1
Query: 1 MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTDAGVHALAQVVHFDCNAERPASAWVRGTNTSMPSGAAVTWMHPVAADFSARYSAQERSYRYVLFNHPVRPALNEGRVAWCHAPLDVARMSAAATHLLGEHDFSAFRSAECQAKSPVRELRRLTIRRSGDYVVFDLAANAFLHHMVRNIVGSLVYVGNGRHEPAWLADVLDSGNRALAAPTLEAAGLYLAHVSYDAKWGLPALA 759
MRIALGIEY+G FCGWQTQP+G +VQDA++ ALA +AG+ I +CAGRTDAGVHA AQVVHFD RP SAWVRGTNT +P V W PVA DF AR+ AQ R YRY+L N P RPA+ GR W HAPLD++ M AAA LLGEHDFSAFR+AECQA+SP++ LRR + + GD++VFD AA AFLHHMVRN+VGSLVYVG GR PAW+ ++L + +R LAAPT AAGLYL V YD +WGLP LA
Sbjct: 1 MRIALGIEYDGGGFCGWQTQPAGGSVQDAVQTALAALAGQPIDIVCAGRTDAGVHASAQVVHFDAPVARPVSAWVRGTNTFLPPAVVVRWARPVADDFHARFCAQGRHYRYLLLNRPQRPAIWHGRAGWHHAPLDLSAMQAAACSLLGEHDFSAFRAAECQARSPIKRLRRADVSQQGDFIVFDFAAGAFLHHMVRNMVGSLVYVGLGRQAPAWIDELLAARDRRLAAPTFSAAGLYLVGVDYDPRWGLPPLA 253 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14230.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14230.2.1 >prot_P-wetherbeei_contig14230.2.1 ID=prot_P-wetherbeei_contig14230.2.1|Name=mRNA_P-wetherbeei_contig14230.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=262bp MRIALGIEYNGATFCGWQTQPSGCAVQDALERALAGIAGEKIATICAGRTback to top mRNA from alignment at P-wetherbeei_contig14230:623..1408+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14230.2.1 ID=mRNA_P-wetherbeei_contig14230.2.1|Name=mRNA_P-wetherbeei_contig14230.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig14230:623..1408+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14230:623..1408+ >mRNA_P-wetherbeei_contig14230.2.1 ID=mRNA_P-wetherbeei_contig14230.2.1|Name=mRNA_P-wetherbeei_contig14230.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=786bp|location=Sequence derived from alignment at P-wetherbeei_contig14230:623..1408+ (Phaeothamnion wetherbeei SAG_119_79)back to top |