mRNA_P-wetherbeei_contig14230.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A1F4BC39_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BC39_9PROT) HSP 1 Score: 118 bits (296), Expect = 2.060e-28 Identity = 75/129 (58.14%), Postives = 88/129 (68.22%), Query Frame = 1
Query: 10 DIAGAAPAAPVGTSSVVPLDPDFKLDLSGDVTMAPGSAPDIPPLDIP---DIKLDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
DIA A AAP ++V+ DF+++L AP +A D KLD +SLNLD+ PKA A A GG KD HWYDVQTKFDLAKAYQEMGDKDGA+EILQEVIKEGD Q+ +AK LL+SLG
Sbjct: 681 DIALEA-AAPAQDANVI----DFQIELPKVEASAPEAAXXXXXXXXXXGLDFKLDGLSLNLDE-PKAGAPAAGGDKDGHWYDVQTKFDLAKAYQEMGDKDGAKEILQEVIKEGDTEQKAQAKTLLDSLG 803
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A3N5NA58_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5NA58_9PROT) HSP 1 Score: 107 bits (266), Expect = 2.820e-27 Identity = 66/130 (50.77%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 16 AGAAPAAPVGTSSVVPLDPDFKLDLSGDVTMAPGS----APDIPPLDIPDIK--LDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
AG P PV ++ + D + S DVT+ P P+ P + ++ LD +SL+L K +A DDHWYDVQTKFDLAKAYQEMGDKDGAREIL EVIKEGDA QQ EA +LL+ LG
Sbjct: 4 AGTQPP-PVEPTTDISFDLQLPGETSTDVTVPPTDISLQVPEFKPAETSTMEFALDTVSLDLGSVEKKEAPPPAPVHDDHWYDVQTKFDLAKAYQEMGDKDGAREILAEVIKEGDAQQQAEANELLSKLG 132
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A7X1P296_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P296_9PROT) HSP 1 Score: 110 bits (274), Expect = 1.930e-25 Identity = 71/138 (51.45%), Postives = 85/138 (61.59%), Query Frame = 1
Query: 25 APAAPVGTSSVVPLDPDFKLDLSGDVTMAPGSAPD----IPP----LDIPDIK----------LDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSL 384
AP P G++ D D+S D + S P +PP LD+P+ K LD +SL+L A K++AA G A DDHWYDVQTKFDLAKAYQEMGDK+GAREIL EVIKEGDA QQ EA +LL+ L
Sbjct: 788 APTIPQGSAMPPVTAADTTADISFDFELPAQSPPTADMVVPPTDIKLDVPEFKPADTTTIDFALDTVSLDLGGAEKSEAA-GAPAHDDHWYDVQTKFDLAKAYQEMGDKEGAREILAEVIKEGDAQQQAEANELLSKL 924
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A3N5W953_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5W953_9PROT) HSP 1 Score: 105 bits (261), Expect = 8.300e-25 Identity = 70/141 (49.65%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 1 MDFDIAG-----AAPAAPVGTSSVVPLDPDFKL---DLSGDVTMAPGSAPDIPPLDIP-DIKLD--DISLNLDDAPKADAAA-GGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
+D I+G AA A P +D +F+L D V AP +AP D D K+D D+++NLDDA A G KD HWYDVQ KFDLAKAYQEMGD DGAREILQEV+KEGDA Q+ +A++LL +LG
Sbjct: 164 LDSTISGMASDIAADATPTVAGDASTIDFNFELPPVDSPAPVAAAPAAAP---ATDAGFDFKIDVGDLNINLDDASTTTTATPAAGGKDSHWYDVQQKFDLAKAYQEMGDNDGAREILQEVLKEGDAEQKGQAQKLLGTLG 301
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A1F4DJT2_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DJT2_9PROT) HSP 1 Score: 105 bits (262), Expect = 7.880e-24 Identity = 56/79 (70.89%), Postives = 63/79 (79.75%), Query Frame = 1
Query: 151 DIKLDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
++ L DI+LNLDD P+ DAAA G KD HWYDVQ KFDLAKAYQEM DK GA+EILQEVI+EGD QQ +AK LL SLG
Sbjct: 696 ELDLGDINLNLDDKPQ-DAAAAGEVKDAHWYDVQAKFDLAKAYQEMSDKAGAQEILQEVIREGDPEQQAQAKALLASLG 773
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A7C2Y786_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2Y786_9PROT) HSP 1 Score: 100 bits (250), Expect = 3.270e-22 Identity = 59/108 (54.63%), Postives = 69/108 (63.89%), Query Frame = 1
Query: 61 PLDPDFKLDLSGDVTMAPGSAPDIPPLDIPDIKLDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSL 384
PL+ +L +G + P + D KL DI LNLD P + A GG KD HWYDVQTKFDLAKAY+EMGDK GAR+IL EVI+EGDA QQ +AK LL L
Sbjct: 686 PLEFHIELPPAGGASSTPSATADT----AASFKLPDIDLNLDATPPS---AAGGGKDAHWYDVQTKFDLAKAYEEMGDKAGARQILGEVIREGDAEQQAQAKSLLARL 786
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A1F4DRQ1_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DRQ1_9PROT) HSP 1 Score: 97.1 bits (240), Expect = 7.260e-21 Identity = 65/160 (40.62%), Postives = 93/160 (58.13%), Query Frame = 1
Query: 1 MDFDIAGAAPAAPVGTSS---------VVPLDPDFKLDLSGDVTMAPGSAPD----IPPLDIP----------------DIKLD--DISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
+DF++ AAP+ +++ + P +P+ K D++ + +A D +P +D+P D KLD ++LNLDD A AA+ G KD HWYDVQ KFDLAK YQEMG+K+ A EIL+EV+KEGDA Q+ +AK LL++LG
Sbjct: 609 LDFNLDAAAPSDTAASATDAGAGFKIEIPPAEPEMKPDIAHGAHESVPAALDFNLELPKVDVPQAGAPAQPKQEQGADVDFKLDFGSVNLNLDDKQPAGAASRGD-KDAHWYDVQQKFDLAKVYQEMGEKNNAVEILEEVMKEGDAEQRAQAKALLDTLG 767
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: UPI001989EA25 (Uncharacterized protein n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI001989EA25) HSP 1 Score: 95.9 bits (237), Expect = 1.870e-20 Identity = 64/133 (48.12%), Postives = 77/133 (57.89%), Query Frame = 1
Query: 1 MDFDIAGAAPAAPVGTSSVVP-----LDPDFKLDLSGDVTMAPGSAPDIPPLDIPDIKLDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSL 384
+DFD + A TSS P +SG APG P+I L ISL+L + A KDDHWYDVQTKFDLAKAYQEMGDKDGAREIL+EV++EGDA Q+T A+ +L+SL
Sbjct: 784 LDFDFDLDSLTASTATSSAAPPAEXXXXXXXXXXMSGLSLDAPGEPRMENRSVAPEIDLSGISLDL--GTETAPAISPTGKDDHWYDVQTKFDLAKAYQEMGDKDGAREILKEVLQEGDAEQKTAAQSVLSSL 914
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: A0A7V8ZPP4_9BURK (FimV family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7V8ZPP4_9BURK) HSP 1 Score: 95.1 bits (235), Expect = 3.480e-20 Identity = 66/134 (49.25%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 10 DIAGAAPAAPVGTSSVVPLDPDFKLDLSGDVT---MAPGSAPDIPPLDIPDIK----LDDISLNLDDAPKA-DAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
D AA A G S PL F+LD T A G + D+P++ L I LN D A A + A++D WYDVQTKFDLAKAYQEMGDK+GAREILQEV++EGDA QQ +K LL SLG
Sbjct: 772 DHDAAASRAQAGELS--PLTSAFELDFPRQETGDRQATGDGNEQDRKDVPNVAVHTDLSTIDLNFDSARTAQERVEAPVARNDQWYDVQTKFDLAKAYQEMGDKEGAREILQEVVQEGDAEQQANSKALLASLG 903
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Match: UPI00199A3CAB (Uncharacterized protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI00199A3CAB) HSP 1 Score: 93.2 bits (230), Expect = 1.400e-19 Identity = 61/144 (42.36%), Postives = 81/144 (56.25%), Query Frame = 1
Query: 1 MDFDIAGAA------------PAAPVGTSSVVPLDPDFKLDLSGDVTM---APGSAPDIPPLDIPDIKLDDISLNLDDAPKADAAAGGGAKDDHWYDVQTKFDLAKAYQEMGDKDGAREILQEVIKEGDAAQQTEAKQLLNSLG 387
+DFD+ GA P + P+DPD + + D+ + +P + P P D P + L +S +L A DA G D W +V TK DLAKAYQEMGDKDGARE+L EV+KEGDAAQQ +A+Q+L+ LG
Sbjct: 376 LDFDLGGATDADDSEKTMLLPPRKKAAEPAARPMDPDATVAMDFDLNLDLDSPRTEPAKPAADAP-LDLGGLSFDLGGA--GDATTGNA--DPKWQEVATKLDLAKAYQEMGDKDGARELLNEVVKEGDAAQQGQARQMLSGLG 514 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14230.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14230.1.1 >prot_P-wetherbeei_contig14230.1.1 ID=prot_P-wetherbeei_contig14230.1.1|Name=mRNA_P-wetherbeei_contig14230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp MDFDIAGAAPAAPVGTSSVVPLDPDFKLDLSGDVTMAPGSAPDIPPLDIPback to top mRNA from alignment at P-wetherbeei_contig14230:123..512+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14230.1.1 ID=mRNA_P-wetherbeei_contig14230.1.1|Name=mRNA_P-wetherbeei_contig14230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig14230:123..512+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14230:123..512+ >mRNA_P-wetherbeei_contig14230.1.1 ID=mRNA_P-wetherbeei_contig14230.1.1|Name=mRNA_P-wetherbeei_contig14230.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig14230:123..512+ (Phaeothamnion wetherbeei SAG_119_79)back to top |