mRNA_P-wetherbeei_contig14201.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14201.1.1
Unique NamemRNA_P-wetherbeei_contig14201.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A0S8B4A1_9PROT (Tyrosine recombinase XerD n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B4A1_9PROT)

HSP 1 Score: 428 bits (1101), Expect = 8.330e-149
Identity = 217/300 (72.33%), Postives = 250/300 (83.33%), Query Frame = 1
Query:    4 EAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKG-GTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            ++ L+DAF DALWLEDGL++N++EAYRRDL+ L  WL +    +L    +  L AFFA+RH +G G   R++SDAR+LSSL+RFYQYCLRE  +  DPTL+L+ PKR PRFPK+L+EADVEALLAAPD++ PLGLRDRAMLE LYA GLRVSELV L+T E NLDAGVVR+ GKGSKERLVPLGEEAV W++RYL +AR  L A +  S ALFVT RGA MTRQAFWHL +R+G RAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:    9 DSGLLDAFCDALWLEDGLARNSIEAYRRDLEQLSLWLLRERRGALTAVDEASLHAFFAARHRRGPGRAPRSASDARLLSSLRRFYQYCLREHRVVEDPTLRLEPPKRTPRFPKSLSEADVEALLAAPDVDSPLGLRDRAMLETLYACGLRVSELVALKTVEANLDAGVVRLFGKGSKERLVPLGEEAVGWIERYLREARAAL-AKRRHSPALFVTARGAPMTRQAFWHLTRRYGARAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERLKALHAKHHPRG 307          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A521V2L0_9PROT (Tyrosine recombinase XerD n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521V2L0_9PROT)

HSP 1 Score: 425 bits (1093), Expect = 6.470e-147
Identity = 224/300 (74.67%), Postives = 251/300 (83.67%), Query Frame = 1
Query:    1 AEAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            A A L+DAF DALWLEDGLSKNTLE+YRRDL  L  +L +   + L  A + DL +F A+R        RASS AR LSSLKRFYQYCLRE  + ADPTL+L+ PK A RFPK+L+EADVEALLAAPD    LGLRDRAMLEVLYA+GLRVSELV L+TF T+LDAGVVR++GKG+KERLVPLGEEAVDWV+RYL +ARP LLAG+A +DALFVT RGA MTRQAFWH IKR+G RAIPGK+LSPHV+RHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:   62 ANAALLDAFCDALWLEDGLSKNTLESYRRDLAQLAAFLQR---RGLDAASESDLFSFLATR------AGRASSAARRLSSLKRFYQYCLRERRVAADPTLRLEPPKPARRFPKSLSEADVEALLAAPDPKSALGLRDRAMLEVLYASGLRVSELVALRTFATSLDAGVVRILGKGAKERLVPLGEEAVDWVRRYLEEARPRLLAGRA-ADALFVTARGAAMTRQAFWHNIKRYGARAIPGKSLSPHVMRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERLKALHAKHHPRG 351          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A1F4EZP2_9PROT (Tyrosine recombinase XerD n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EZP2_9PROT)

HSP 1 Score: 421 bits (1081), Expect = 5.590e-146
Identity = 223/300 (74.33%), Postives = 247/300 (82.33%), Query Frame = 1
Query:    1 AEAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            A+A L+DAF DALWLEDGLS+NTLE+YRRDL  L  +L     + L  A + DL AF A+R        RASS AR LSSLKRFYQYCLRE  + ADPTL+LD+PK   RFPK+L+EAD+EALLAAPD    LGLRDRAMLEVLYA GLRVSELV L+TFET+LDAGVVRV+GKGSKERLVPLGEEA+DWVKRYL +ARP LL  ++ SDALFVT RG  MTRQAFWH IKR G RAIPGK+LSPHVLRHAFATHLINHGADLRVVQ+LLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:    4 ADAALLDAFCDALWLEDGLSRNTLESYRRDLAQLAAFLE---ARGLDAAGEADLFAFLATR------AGRASSAARRLSSLKRFYQYCLRERRLAADPTLRLDAPKPPRRFPKSLSEADIEALLAAPDPKTVLGLRDRAMLEVLYATGLRVSELVALKTFETSLDAGVVRVLGKGSKERLVPLGEEAIDWVKRYLGEARPELLRRRS-SDALFVTARGGAMTRQAFWHNIKRFGARAIPGKSLSPHVLRHAFATHLINHGADLRVVQLLLGHADISTTQIYTHVARERLKALHAKHHPRG 293          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A1F3YNE0_9PROT (Tyrosine recombinase XerD n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YNE0_9PROT)

HSP 1 Score: 418 bits (1075), Expect = 5.090e-145
Identity = 220/299 (73.58%), Postives = 244/299 (81.61%), Query Frame = 1
Query:    4 EAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            +A L+DAF DALWLEDGLSKNTL +YRRDL+    +L K+    L +A +  L AF A R        RASS ARMLSSLKRFY +CLRE  + ADPTLKLD PKR PRFP+TL+EADVEALLAAPD+N PLG+RDRAM EVLYAAGLRVSELVG++ FE NL+AGVVRVMGKGSKERLVPLGEEAVDWV+RY  + R  LL  K  SD LF+T RGAGMTRQAFW  IKR+G RA+PGK LSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ER+K LHA HHPRG
Sbjct:    8 DAALLDAFCDALWLEDGLSKNTLSSYRRDLEQFASFLKKTP---LEKASEEKLFAFLAVRRG------RASSAARMLSSLKRFYGWCLRERRIRADPTLKLDPPKRTPRFPRTLSEADVEALLAAPDVNTPLGMRDRAMFEVLYAAGLRVSELVGMKVFEVNLEAGVVRVMGKGSKERLVPLGEEAVDWVRRYTKEFRFSLLK-KGSSDHLFITSRGAGMTRQAFWQNIKRYGARAVPGKPLSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERMKALHAKHHPRG 296          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A521YYE3_9PROT (Tyrosine recombinase XerD n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521YYE3_9PROT)

HSP 1 Score: 415 bits (1067), Expect = 5.100e-144
Identity = 218/296 (73.65%), Postives = 246/296 (83.11%), Query Frame = 1
Query:   13 LVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            L+DAF DALWLEDGLSKNT+ +YR DL+ L      +A K L +  + DL +F A+R  KG    RASS AR++SSLKRFYQYCLRE  + ADPTLKLD PKRAPRFPKTL+EADVEALL APD++ PLGLRDRAMLE LYA GLRVSELV L+TFE NL+AGVVRV+GKG+KERLVPLGEEAVDW+KRYLA       A K  +DALF+T RGAGMTRQAFWHLI+R+G RAIPG+ LSPH+LRHAFATHLINHGADLRVVQ+LLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:    6 LLDAFCDALWLEDGLSKNTISSYRTDLEQL------AARKDLLKIDEADLFSFLATR--KG----RASSAARLVSSLKRFYQYCLRERRIAADPTLKLDPPKRAPRFPKTLSEADVEALLGAPDVSTPLGLRDRAMLETLYATGLRVSELVALKTFEVNLEAGVVRVLGKGAKERLVPLGEEAVDWIKRYLA-------ARKGDADALFLTGRGAGMTRQAFWHLIRRYGVRAIPGQKLSPHMLRHAFATHLINHGADLRVVQLLLGHADISTTQIYTHVARERLKALHAKHHPRG 282          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A1F4ET10_9PROT (Tyrosine recombinase XerD n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4ET10_9PROT)

HSP 1 Score: 411 bits (1057), Expect = 4.110e-142
Identity = 213/299 (71.24%), Postives = 246/299 (82.27%), Query Frame = 1
Query:    4 EAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            +A L+D F DALWLEDGL++N++E+YRRDL+L   +L +     LA A + +L AF ASR        RASS AR++SSLKRFY+YC+RE ++ ADPTL+LD PKRAPRFP++L+EADVEALLAAPD   PLG+RDRAMLE LYA GLRVSELV L++FE NLDAGVVRV+GKGSKERLVPLGEEAV WV RYL +ARP+L   K  +DALFVT RGA MTRQAFW+ I+ +G RA PGK LSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:   19 DAALLDEFCDALWLEDGLARNSIESYRRDLELFAAFLGEHG---LARAAEAELFAFLASRRG------RASSAARLVSSLKRFYRYCMRERKIAADPTLRLDPPKRAPRFPRSLSEADVEALLAAPDTRTPLGMRDRAMLEALYATGLRVSELVALKSFEANLDAGVVRVLGKGSKERLVPLGEEAVHWVSRYLEEARPVLAKRKV-ADALFVTGRGAAMTRQAFWYRIRGYGARATPGKRLSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERLKALHAKHHPRG 307          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A2W4JSQ8_9PROT (Tyrosine recombinase XerD n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4JSQ8_9PROT)

HSP 1 Score: 410 bits (1054), Expect = 1.170e-141
Identity = 209/300 (69.67%), Postives = 241/300 (80.33%), Query Frame = 1
Query:    1 AEAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            A+A L+D F D LWLEDGL++NTLEAYRRDL+LLG+WLAK  G+ L EA + DL  + A+RHE GG   RAS+ AR+LSS KRFY Y LRE  + ADPTL+L   K+ PRFPKTL+EA VEALLAAPD+  PLGLRDRAMLE LYA GLRVSELV L+  E  LD GVVR+ GKG+KERLVPLGE AV+W++RYL   RPL   G+  +DA+F+T RG  MTRQAFW+LI+RH   AIPG ALSPH LRHAFATHL+NHGADLRVVQMLLGHADISTTQIYTHVA+ERLK+LHA HHPR 
Sbjct:   11 ADAALLDEFCDQLWLEDGLARNTLEAYRRDLRLLGEWLAKR-GRGLLEATETDLLGYLAARHE-GGRRPRASTQARLLSSFKRFYHYLLRERRISADPTLELGPSKKPPRFPKTLSEAQVEALLAAPDVETPLGLRDRAMLETLYATGLRVSELVALRLPEVQLDMGVVRIFGKGAKERLVPLGEVAVEWIERYLRQVRPLFAKGRT-NDAVFLTPRGEPMTRQAFWYLIRRHAATAIPGVALSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKRLHAEHHPRA 307          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A1F4BHS6_9PROT (Tyrosine recombinase XerD n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_19 TaxID=1797491 RepID=A0A1F4BHS6_9PROT)

HSP 1 Score: 410 bits (1053), Expect = 1.400e-141
Identity = 215/300 (71.67%), Postives = 242/300 (80.67%), Query Frame = 1
Query:    1 AEAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            A++ L+D F DALWLEDGL+KNTL +YRRDL  L  +L +   + L  A + DL ++ A+R        R+SS AR LSSLKRFYQYCLRE  +  DPTLKLD PK   RFPK+L+EADVEALLAAPD   P GLRDRAMLEVLYA+GLRVSELV L+ FE NLDAGVVRV+GKG+KERLVPLGEEA+DWV+RYL  AR  LL G+A  DALFVT RGA MTRQAFWH IKR+G  AIPGK+LSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ER+K LHA HHPRG
Sbjct:   13 ADSALLDVFCDALWLEDGLAKNTLASYRRDLSQLAAYLGQ---RGLDTATEADLFSYLATR------AGRSSSAARRLSSLKRFYQYCLRERRIAVDPTLKLDPPKPPRRFPKSLSEADVEALLAAPDCGTPRGLRDRAMLEVLYASGLRVSELVALKIFEANLDAGVVRVLGKGAKERLVPLGEEAIDWVRRYLEQARAQLLRGRA-GDALFVTARGAAMTRQAFWHNIKRYGAAAIPGKSLSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERMKALHAKHHPRG 302          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A1F4C7W8_9PROT (Tyrosine recombinase XerD n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4C7W8_9PROT)

HSP 1 Score: 405 bits (1042), Expect = 7.850e-140
Identity = 204/299 (68.23%), Postives = 241/299 (80.60%), Query Frame = 1
Query:    4 EAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            +A L+D F D LWLEDGL+KNTLEAYRRDL L GDWLA++  ++L + R+ DL A+FA R+ +     RASS AR+ SSLKRF+Q+ LRE  + ADPTLKLD+PK+  RFPK+LTE+DVEALLAAPD+   LGLRDRAMLE+LYA GLRVSELV L+  E N D GVVRV GKG KER+VP+GEEA  W+ R+L   RP LLA +A SDA FVT RGA MTRQA W+LIK+H + ++PGK++SPH LRHAFATHL+NHGADLRVVQMLLGHADISTTQIYTHVA+ERLK LH  HHPRG
Sbjct:   12 DAALLDEFCDHLWLEDGLAKNTLEAYRRDLTLFGDWLARTQKRALLDTREEDLSAYFAFRYTQARL--RASSQARLHSSLKRFFQFALRENRVAADPTLKLDTPKKPQRFPKSLTESDVEALLAAPDVESALGLRDRAMLEMLYATGLRVSELVALKLIEINQDMGVVRVFGKGGKERMVPMGEEASAWLTRFLKQGRPRLLA-RAQSDAAFVTARGAAMTRQALWYLIKKHARASVPGKSMSPHTLRHAFATHLLNHGADLRVVQMLLGHADISTTQIYTHVARERLKLLHQKHHPRG 307          
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Match: A0A537BWR9_9PROT (Tyrosine recombinase XerD n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A537BWR9_9PROT)

HSP 1 Score: 404 bits (1039), Expect = 2.020e-139
Identity = 215/296 (72.64%), Postives = 242/296 (81.76%), Query Frame = 1
Query:   13 LVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEARDPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTLKLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLRVSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARPLLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG 900
            L+DAF DALWLEDGL+KN++ +YR DL+ L  +L       L +A + +L AF ASR  KG    RA+S AR +SSLKRFY+YCLRE  + ADPTLKLD PKR PRFPKTL+EADVEALLAAPD +  LG+RDRAMLE LYA GLRVSELV L+ FE NL+AGVVRV+GKGSKERLVPLGEEAV W+++YL + R  LL  K   DALFVT RGAGMTRQAFWHLI+R+G RAIPGK LSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVA+ERLK LHA HHPRG
Sbjct:   20 LLDAFCDALWLEDGLAKNSIASYRADLEQLAAFL----NDGLLKAGEAELYAFLASR--KG----RATSAARRVSSLKRFYRYCLRERRIAADPTLKLDPPKRPPRFPKTLSEADVEALLAAPDASTALGVRDRAMLETLYATGLRVSELVALKVFEANLEAGVVRVLGKGSKERLVPLGEEAVHWLQKYLKEGRGPLLKTKNV-DALFVTARGAGMTRQAFWHLIRRYGTRAIPGKRLSPHVLRHAFATHLINHGADLRVVQMLLGHADISTTQIYTHVARERLKALHARHHPRG 304          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14201.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8B4A1_9PROT8.330e-14972.33Tyrosine recombinase XerD n=1 Tax=Betaproteobacter... [more]
A0A521V2L0_9PROT6.470e-14774.67Tyrosine recombinase XerD n=2 Tax=Betaproteobacter... [more]
A0A1F4EZP2_9PROT5.590e-14674.33Tyrosine recombinase XerD n=2 Tax=unclassified Bet... [more]
A0A1F3YNE0_9PROT5.090e-14573.58Tyrosine recombinase XerD n=1 Tax=Betaproteobacter... [more]
A0A521YYE3_9PROT5.100e-14473.65Tyrosine recombinase XerD n=2 Tax=unclassified Bet... [more]
A0A1F4ET10_9PROT4.110e-14271.24Tyrosine recombinase XerD n=1 Tax=Betaproteobacter... [more]
A0A2W4JSQ8_9PROT1.170e-14169.67Tyrosine recombinase XerD n=1 Tax=Proteobacteria b... [more]
A0A1F4BHS6_9PROT1.400e-14171.67Tyrosine recombinase XerD n=1 Tax=Betaproteobacter... [more]
A0A1F4C7W8_9PROT7.850e-14068.23Tyrosine recombinase XerD n=2 Tax=unclassified Bet... [more]
A0A537BWR9_9PROT2.020e-13972.64Tyrosine recombinase XerD n=5 Tax=Betaproteobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14201contigP-wetherbeei_contig14201:254..1156 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog580332.Slit_2734
Preferred namexerD
PFAMsPhage_int_SAM_1,Phage_integrase
Model size903
Max annot lvl28216|Betaproteobacteria
KEGG koko:K04763
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.21e-136
EggNOG OGsCOG4974@1|root,COG4974@2|Bacteria,1MVNF@1224|Proteobacteria,2VIHD@28216|Betaproteobacteria,44V19@713636|Nitrosomonadales
DescriptionPhage integrase, N-terminal SAM-like domain
Cds size903
COG categoryL
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186012.9748724-CDS-P-wetherbeei_contig14201:253..11561683186012.9748724-CDS-P-wetherbeei_contig14201:253..1156Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14201 254..1156 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14201.1.1prot_P-wetherbeei_contig14201.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14201 254..1156 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14201.1.1

>prot_P-wetherbeei_contig14201.1.1 ID=prot_P-wetherbeei_contig14201.1.1|Name=mRNA_P-wetherbeei_contig14201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp
AEAELVDAFSDALWLEDGLSKNTLEAYRRDLKLLGDWLAKSAGKSLAEAR
DPDLQAFFASRHEKGGTGHRASSDARMLSSLKRFYQYCLREGEMDADPTL
KLDSPKRAPRFPKTLTEADVEALLAAPDMNEPLGLRDRAMLEVLYAAGLR
VSELVGLQTFETNLDAGVVRVMGKGSKERLVPLGEEAVDWVKRYLADARP
LLLAGKAPSDALFVTERGAGMTRQAFWHLIKRHGQRAIPGKALSPHVLRH
AFATHLINHGADLRVVQMLLGHADISTTQIYTHVAKERLKKLHAMHHPRG
*
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mRNA from alignment at P-wetherbeei_contig14201:254..1156+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14201.1.1 ID=mRNA_P-wetherbeei_contig14201.1.1|Name=mRNA_P-wetherbeei_contig14201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig14201:254..1156+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGAGGCGGAACTGGTCGACGCGTTTTCCGACGCCCTGTGGCTGGAGGA CGGGCTGTCGAAGAACACGCTCGAGGCCTACCGCAGGGACCTGAAGTTAC TTGGCGACTGGCTGGCGAAATCAGCCGGCAAGTCGCTCGCCGAGGCGCGG GACCCCGACCTTCAGGCGTTCTTCGCTTCGAGGCATGAGAAAGGCGGCAC CGGGCACCGGGCGTCGTCCGACGCGCGCATGCTCTCCAGCCTCAAGCGTT TCTACCAGTACTGCCTGCGTGAGGGCGAGATGGACGCGGACCCTACGCTG AAGCTCGATTCGCCCAAGCGCGCGCCGCGGTTTCCGAAGACGCTGACCGA AGCCGACGTCGAGGCCCTGCTCGCGGCGCCGGACATGAACGAGCCGCTGG GGCTGCGCGACCGCGCGATGCTCGAGGTGCTTTACGCAGCGGGCCTGCGC GTGTCGGAACTGGTCGGCCTGCAGACCTTCGAGACCAACCTCGACGCGGG CGTGGTGCGTGTGATGGGCAAGGGGTCGAAGGAGCGCCTCGTGCCGCTCG GCGAGGAGGCCGTGGACTGGGTGAAGCGTTACCTCGCGGATGCGCGGCCG CTGCTGCTCGCGGGCAAGGCGCCGAGCGACGCGCTGTTCGTCACCGAGCG CGGTGCGGGCATGACGCGGCAGGCATTCTGGCACCTCATCAAGCGGCACG GCCAGCGCGCGATCCCCGGCAAGGCGCTGTCCCCGCACGTACTGCGCCAC GCTTTCGCCACCCACCTCATCAACCACGGGGCGGACCTGCGCGTGGTGCA GATGCTGCTCGGCCACGCGGATATCTCCACCACGCAGATCTATACGCACG TCGCGAAGGAAAGGCTGAAGAAACTCCATGCGATGCACCACCCGCGGGGC TGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14201:254..1156+

>mRNA_P-wetherbeei_contig14201.1.1 ID=mRNA_P-wetherbeei_contig14201.1.1|Name=mRNA_P-wetherbeei_contig14201.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig14201:254..1156+ (Phaeothamnion wetherbeei SAG_119_79)
GCCGAGGCGGAACTGGTCGACGCGTTTTCCGACGCCCTGTGGCTGGAGGA
CGGGCTGTCGAAGAACACGCTCGAGGCCTACCGCAGGGACCTGAAGTTAC
TTGGCGACTGGCTGGCGAAATCAGCCGGCAAGTCGCTCGCCGAGGCGCGG
GACCCCGACCTTCAGGCGTTCTTCGCTTCGAGGCATGAGAAAGGCGGCAC
CGGGCACCGGGCGTCGTCCGACGCGCGCATGCTCTCCAGCCTCAAGCGTT
TCTACCAGTACTGCCTGCGTGAGGGCGAGATGGACGCGGACCCTACGCTG
AAGCTCGATTCGCCCAAGCGCGCGCCGCGGTTTCCGAAGACGCTGACCGA
AGCCGACGTCGAGGCCCTGCTCGCGGCGCCGGACATGAACGAGCCGCTGG
GGCTGCGCGACCGCGCGATGCTCGAGGTGCTTTACGCAGCGGGCCTGCGC
GTGTCGGAACTGGTCGGCCTGCAGACCTTCGAGACCAACCTCGACGCGGG
CGTGGTGCGTGTGATGGGCAAGGGGTCGAAGGAGCGCCTCGTGCCGCTCG
GCGAGGAGGCCGTGGACTGGGTGAAGCGTTACCTCGCGGATGCGCGGCCG
CTGCTGCTCGCGGGCAAGGCGCCGAGCGACGCGCTGTTCGTCACCGAGCG
CGGTGCGGGCATGACGCGGCAGGCATTCTGGCACCTCATCAAGCGGCACG
GCCAGCGCGCGATCCCCGGCAAGGCGCTGTCCCCGCACGTACTGCGCCAC
GCTTTCGCCACCCACCTCATCAACCACGGGGCGGACCTGCGCGTGGTGCA
GATGCTGCTCGGCCACGCGGATATCTCCACCACGCAGATCTATACGCACG
TCGCGAAGGAAAGGCTGAAGAAACTCCATGCGATGCACCACCCGCGGGGC
TGA
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