mRNA_P-wetherbeei_contig14173.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: D7FIP5_ECTSI (Uncharacterized protein ycf23 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIP5_ECTSI) HSP 1 Score: 228 bits (581), Expect = 2.020e-69 Identity = 122/184 (66.30%), Postives = 150/184 (81.52%), Query Frame = 1
Query: 322 TTVVAATFSSACA----FAP--LAADVLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSPQK 855
T V+AA + +CA F+P ++ DVLAPF+AGKALK+ISGL++FD++LV+KVARAA GG + +D+AC PDLV AA+A + PVCVSAVDP LFPACV+AGA MVELGNFD FY++G+TFSA DVL+MTR+TR LLPTTPLSVTVPHTL LD+QV LA ELE G D++QTEGK+SL P K
Sbjct: 4 TCVIAAAAALSCADAFCFSPARMSGDVLAPFQAGKALKVISGLNKFDADLVSKVARAAAAGGGTHIDIACDPDLVRAAKAVS-NVPVCVSAVDPELFPACVDAGAEMVELGNFDCFYDQGLTFSAEDVLEMTRKTRALLPTTPLSVTVPHTLDLDDQVDLAVELEGLGVDVIQTEGKFSLDPSK 186
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A835YK10_9STRA (Uncharacterized protein ycf23 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK10_9STRA) HSP 1 Score: 196 bits (499), Expect = 3.520e-57 Identity = 102/182 (56.04%), Postives = 132/182 (72.53%), Query Frame = 1
Query: 304 MKLLLATTVVAATFSSACAFAPLAADVLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
M L + V A+ F ++ D +APF+A KALKIISG+ FDSELV KVA AA+ GGA+ +D+A P+LV A+ AP+ +CVSA++P L CVEAGA MVELGNFD FY++G+ F+A DV+ MT+ TR LLP TPLSVT+PH LH+D+QV+LAQ L+ G D++QTEGKYSL P
Sbjct: 1 MALKVTAAAVVASLCGVEGFMTMSGDAIAPFRAHKALKIISGITNFDSELVRKVAVAAQAGGATHLDIAADPELVKLAKRTAPSVSICVSAIEPELLVPCVEAGADMVELGNFDMFYDQGMDFTADDVITMTKATRALLPKTPLSVTIPHKLHMDQQVTLAQALQELGVDVIQTEGKYSLDP 182
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A7T1HVB9_9SYNE (DUF561 domain-containing protein n=1 Tax=Synechococcus sp. CBW1004 TaxID=1353136 RepID=A0A7T1HVB9_9SYNE) HSP 1 Score: 177 bits (448), Expect = 7.570e-50 Identity = 92/149 (61.74%), Postives = 112/149 (75.17%), Query Frame = 1
Query: 403 GKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
G+ALK+I+GL FD+ V ++ARAA GGA +D+AC PDLV A +A AP P+CVSAVDP LFPA +EAGA M E+GNFD FY +G FSAA+VL++TRRTR+LLP LSVTVPH L LDEQ LA +L AGAD++QTEG S P
Sbjct: 18 GRALKVIAGLTNFDTASVQRIARAAAAGGADLLDLACDPDLVRAVQAVAPELPLCVSAVDPELFPAAIEAGAVMAEIGNFDTFYAQGRVFSAAEVLELTRRTRELLPHVVLSVTVPHVLPLDEQEQLAVDLAEAGADLIQTEGGTSARP 166
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: K9P7N7_CYAGP (Uncharacterized protein n=3 Tax=Cyanobacteria TaxID=1117 RepID=K9P7N7_CYAGP) HSP 1 Score: 174 bits (442), Expect = 5.730e-49 Identity = 97/149 (65.10%), Postives = 111/149 (74.50%), Query Frame = 1
Query: 403 GKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
G+ALK+I+GLD FD+ V +V RAA GGA VD+AC P LV A A AP PVCVSAVDP LFP VEAGAAMVE+GN+D+FY +G F AA+VL +TRRTR LLP T LSVTVPHTL LD Q LA EL AAGAD++QTEG S P
Sbjct: 18 GRALKVIAGLDNFDAARVQRVVRAAAAGGADLVDLACDPTLVRLAVALAPGLPVCVSAVDPLLFPPAVEAGAAMVEIGNYDSFYPQGRIFGAAEVLALTRRTRALLPETVLSVTVPHTLPLDGQERLAVELVAAGADLIQTEGGTSARP 166
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A081GHX8_9CYAN (Uncharacterized protein n=1 Tax=Cyanobium sp. CACIAM 14 TaxID=1496688 RepID=A0A081GHX8_9CYAN) HSP 1 Score: 173 bits (439), Expect = 1.600e-48 Identity = 93/149 (62.42%), Postives = 110/149 (73.83%), Query Frame = 1
Query: 403 GKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
G+ LK+I+GLD FD+ V +VA AA GGA VDVAC P LV A AP PVCVS VDP+LFPA V AGAAMVE+GN+D+FY +G F AA+VL++TRR+R LLP T LSVTVPHTL LDEQ LA +L AAGAD++QTEG P
Sbjct: 18 GRLLKVIAGLDNFDAASVQRVAAAAAAGGADLVDVACEPALVRLVAAVAPGLPVCVSGVDPALFPAAVAAGAAMVEIGNYDSFYPQGRVFDAAEVLELTRRSRDLLPNTVLSVTVPHTLPLDEQERLAVDLVAAGADLIQTEGGTGARP 166
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A166CRX2_DAUCS (Uncharacterized protein ycf23 n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166CRX2_DAUCS) HSP 1 Score: 170 bits (431), Expect = 1.060e-46 Identity = 88/158 (55.70%), Postives = 117/158 (74.05%), Query Frame = 1
Query: 382 VLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSPQK 855
VL F A KA+KIISGL FD + V V AA+ GGA+ VD+AC PDLV A + + P+CVS+VDP+ FPA +EAGA MVE+GN+D+FYEKG+TFS ++L++TR T+++LP+ LSVTVPHTL L +Q+ LA++LE G D++QTEG SP K
Sbjct: 60 VLKDFHAKKAIKIISGLQNFDKDNVASVVTAADKGGATHVDIACDPDLVKLATSLT-SLPICVSSVDPAAFPAAIEAGAVMVEIGNYDSFYEKGVTFSPEEILNLTRETKKILPSVALSVTVPHTLSLPDQIKLAEQLEQEGVDVIQTEGGKYSSPTK 216
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A1Y1HWD8_KLENI (Uncharacterized protein ycf23 n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HWD8_KLENI) HSP 1 Score: 169 bits (429), Expect = 2.380e-46 Identity = 98/168 (58.33%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 346 SSACAFAPLAADVLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
S+ A AP DVL PF KA K+I+GL F+ E V ++ AAE GGA+ VD+AC P+LV A + + PVCVSAV+P LF V AGA MVE+GN+D FY +G TF A +VL +TRRTRQLLPT PLSVTVPHTL L +QV LA+ LE AGADI+QTEG S +P
Sbjct: 56 SAGQADAPSRQDVLRPFAEKKAFKVIAGLKNFNRENVAEIVAAAEQGGATHVDIACDPELVKLACSLT-SVPVCVSAVEPELFVPAVAAGATMVEIGNYDPFYAEGRTFDAEEVLALTRRTRQLLPTIPLSVTVPHTLPLPDQVHLAELLENAGADIIQTEGGVSSAP 222
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A4P5VHX2_9CYAN (Uncharacterized protein n=1 Tax=Cyanobium sp. TaxID=2164130 RepID=A0A4P5VHX2_9CYAN) HSP 1 Score: 164 bits (416), Expect = 4.880e-45 Identity = 89/146 (60.96%), Postives = 105/146 (71.92%), Query Frame = 1
Query: 412 LKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
LK+I+GL D V K+ARAA GGA VD+AC P LV A AA P P+CVSAV+P LFPA V AGAAMVE+GNFD+FY +G F A +VL++TRRTR LLP LSVTVPH L LD+Q LA +L AAGAD++QTEG S P
Sbjct: 21 LKVIAGLTNLDPVAVLKIARAAAAGGADLVDIACEPALVRAVAAACPQLPICVSAVNPELFPAAVAAGAAMVEIGNFDSFYPQGRIFGADEVLELTRRTRALLPEVVLSVTVPHVLPLDQQELLAVDLVAAGADLIQTEGGTSARP 166
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A2R6WR99_MARPO (Uncharacterized protein ycf23 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WR99_MARPO) HSP 1 Score: 166 bits (421), Expect = 6.780e-45 Identity = 106/200 (53.00%), Postives = 127/200 (63.50%), Query Frame = 1
Query: 277 SSCLPDALQMKLL---------LATTVVAATFSSACAFAPLAADVLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
SS LP Q K A VV A SSA + + L F A KALK+I+GL FD + V V AAE GGA+ VD+AC DLV A A+ + P+CVS+V P F A V AGA MVE+GN+D FY+ G FSA +VLD+TRRTR LLP LSVTVPHTL LDEQVSLA++LE AGAD++QTEG S +P
Sbjct: 47 SSLLPSVFQAKNFSGYSKSRAKYARNVVKAAASSARSDEEIREFCLKQFSARKALKVIAGLHNFDRKSVADVVIAAEKGGATHVDIACDADLVRLA-ASLTSLPICVSSVIPEAFVAAVHAGAHMVEIGNYDGFYKSGRVFSAEEVLDLTRRTRSLLPKVVLSVTVPHTLPLDEQVSLAEKLETAGADLIQTEGGTSSAP 245
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Match: A0A388JY51_CHABU (Uncharacterized protein ycf23 n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388JY51_CHABU) HSP 1 Score: 166 bits (419), Expect = 9.170e-45 Identity = 95/156 (60.90%), Postives = 115/156 (73.72%), Query Frame = 1
Query: 382 VLAPFKAGKALKIISGLDRFDSELVTKVARAAELGGASCVDVACRPDLVTAARAAAPTTPVCVSAVDPSLFPACVEAGAAMVELGNFDAFYEKGITFSAADVLDMTRRTRQLLPTTPLSVTVPHTLHLDEQVSLAQELEAAGADILQTEGKYSLSP 849
VL PF+ +ALKIISGL D+E V V AA+ GGA+ VD+A P+LV A T PVCVS+VDP F A V+AGA M+E+GN+D+FY++G TFSAA+VL++T RTRQLLP LSVTVPHTL LDEQV LA+ LEA G DI+QTEG S SP
Sbjct: 119 VLKPFQERRALKIISGLHNLDAENVAAVVAAADQGGATHVDIASDPELVRMALEIT-TLPVCVSSVDPDSFIAAVDAGAHMIEIGNYDSFYKEGRTFSAAEVLELTCRTRQLLPRIVLSVTVPHTLPLDEQVKLAEALEAEGVDIIQTEGGTSSSP 273 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14173.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14173.1.1 >prot_P-wetherbeei_contig14173.1.1 ID=prot_P-wetherbeei_contig14173.1.1|Name=mRNA_P-wetherbeei_contig14173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=185bp MKLLLATTVVAATFSSACAFAPLAADVLAPFKAGKALKIISGLDRFDSELback to top mRNA from alignment at P-wetherbeei_contig14173:149..1701- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14173.1.1 ID=mRNA_P-wetherbeei_contig14173.1.1|Name=mRNA_P-wetherbeei_contig14173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1553bp|location=Sequence derived from alignment at P-wetherbeei_contig14173:149..1701- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14173:149..1701- >mRNA_P-wetherbeei_contig14173.1.1 ID=mRNA_P-wetherbeei_contig14173.1.1|Name=mRNA_P-wetherbeei_contig14173.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=555bp|location=Sequence derived from alignment at P-wetherbeei_contig14173:149..1701- (Phaeothamnion wetherbeei SAG_119_79)back to top |