mRNA_P-wetherbeei_contig1417.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1417.1.2
Unique NamemRNA_P-wetherbeei_contig1417.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: A0A8K1CTW6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTW6_PYTOL)

HSP 1 Score: 140 bits (352), Expect = 3.240e-34
Identity = 62/99 (62.63%), Postives = 79/99 (79.80%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLKA 298
            ++SLS+F+D+K IL+VNVASACGYT  NY+ELQ LYE++   G  +LAFPCNQFG QEP   + IL FV  +Y VTFP+L K+EVNGP AHP+F++LKA
Sbjct:   46 DISLSTFQDSKAILLVNVASACGYTESNYKELQVLYEKYHADGLEILAFPCNQFGGQEPEGETQILKFVQEKYQVTFPVLAKIEVNGPNAHPLFQYLKA 144
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: A0A835YHD0_9STRA (Glutathione peroxidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHD0_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.910e-33
Identity = 65/103 (63.11%), Postives = 80/103 (77.67%), Query Frame = 2 
Query:    2 ELSLSSFKD-NKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLKAASG 307
            ++ LS++K+ N V LVVNVAS CGYT  NY+ELQ LYE ++  GF VLAFPCNQFG+QEPGS +DI DF T +Y VTFP++ KVEVNG G  P+F FLK A+G
Sbjct:   41 DVPLSAYKETNPVALVVNVASQCGYTDTNYRELQQLYEEYEEDGFIVLAFPCNQFGSQEPGSPADIRDFTTEKYGVTFPLMAKVEVNGDGEDPLFTFLKEATG 143
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: H3G551_PHYRM (Glutathione peroxidase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G551_PHYRM)

HSP 1 Score: 130 bits (327), Expect = 2.430e-31
Identity = 62/99 (62.63%), Postives = 76/99 (76.77%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKV-EVNGPGAHPVFKFLK 295
            E+S+  F    VILVVNVAS CGYT +NY+ELQ LYE++  +GFTVL FPCNQFGAQEPG++ +IL F   +Y VTFP+  KV +VNG  AHP+FKFLK
Sbjct:   14 EVSMREFSAFPVILVVNVASDCGYTDKNYRELQDLYEKYHDEGFTVLGFPCNQFGAQEPGTAEEILKFTREKYHVTFPLFTKVVDVNGDNAHPLFKFLK 112
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: A0A2P4XJ83_9STRA (Glutathione peroxidase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XJ83_9STRA)

HSP 1 Score: 132 bits (331), Expect = 3.000e-31
Identity = 60/98 (61.22%), Postives = 75/98 (76.53%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLK 295
            ++S+  F    VILVVNVAS CGYT +NY+ELQ LYE++  +GF VLAFPCNQFG QEPG++ DIL F   +Y VTFP+  KV+VNG  AHP+F+FLK
Sbjct:   42 QVSMREFNAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFMVLAFPCNQFGGQEPGTAEDILKFTQEKYHVTFPLFTKVDVNGENAHPLFQFLK 139
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: M4B8U8_HYAAE (Glutathione peroxidase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B8U8_HYAAE)

HSP 1 Score: 130 bits (327), Expect = 1.150e-30
Identity = 59/98 (60.20%), Postives = 75/98 (76.53%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLK 295
            E+S+ +F    VILVVNVAS CGYT +NY+ELQ LYE++  +GF VL FPCNQFG QEPG++ DI+ F   +Y VTFP+  KV+VNG  AHP+F+FLK
Sbjct:   46 EVSMRTFSAFPVILVVNVASECGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTNDDIMKFTKEKYHVTFPLFTKVDVNGDKAHPLFQFLK 143
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: K3WSD1_GLOUD (Glutathione peroxidase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSD1_GLOUD)

HSP 1 Score: 130 bits (327), Expect = 1.250e-30
Identity = 59/98 (60.20%), Postives = 74/98 (75.51%), Query Frame = 2 
Query:    5 LSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLKA 298
            ++L SF   K ILVVNVASACGYT +NY+ELQ LYE++  QG  +LAFPCNQFG+QE G+ + I+ FV   Y VTFP+  KV+VNG  AHP+F FLK+
Sbjct:   59 VALRSFAHQKAILVVNVASACGYTDQNYKELQALYEKYHEQGLEILAFPCNQFGSQESGTQAQIMQFVEEHYHVTFPVFAKVDVNGANAHPLFTFLKS 156
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: A0A0P1B4P4_PLAHL (Glutathione peroxidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4P4_PLAHL)

HSP 1 Score: 130 bits (326), Expect = 1.250e-30
Identity = 59/98 (60.20%), Postives = 73/98 (74.49%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLK 295
            E+S+  F    VILVVNVAS CGYT +NY+ELQ LYE++  +GF VL FPCNQFG QEPG++ DIL F   +Y VTFP+  KV+VNG  AHP+F +LK
Sbjct:   38 EVSMREFHAFPVILVVNVASQCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTADDILKFTQEKYHVTFPLFSKVDVNGENAHPLFTYLK 135
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: D0NQR7_PHYIT (Glutathione peroxidase n=3 Tax=Phytophthora infestans TaxID=4787 RepID=D0NQR7_PHYIT)

HSP 1 Score: 127 bits (320), Expect = 2.540e-30
Identity = 58/95 (61.05%), Postives = 70/95 (73.68%), Query Frame = 2 
Query:   11 LSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLK 295
            +  F    VILVVNVAS CGYT +NY+ELQ LYE++  +GF VL FPCNQFG QEPG++ DIL F   +Y VTFP+  KV+VNG  AHP+F FLK
Sbjct:    1 MREFNAFPVILVVNVASDCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEDILKFAQEKYHVTFPLFNKVDVNGENAHPLFNFLK 95
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: G4ZTH2_PHYSP (Glutathione peroxidase n=4 Tax=Phytophthora TaxID=4783 RepID=G4ZTH2_PHYSP)

HSP 1 Score: 127 bits (319), Expect = 3.460e-30
Identity = 58/95 (61.05%), Postives = 71/95 (74.74%), Query Frame = 2 
Query:   11 LSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLK 295
            +  F   +VILVVNVAS CGYT +NY+ELQ LYE++  +GF VL FPCNQFG QEPG++  IL F   +Y VTFP+  KV+VNG  AHP+FKFLK
Sbjct:    1 MREFSAFRVILVVNVASDCGYTDKNYRELQELYEKYHDEGFMVLGFPCNQFGGQEPGTAEGILKFTQEKYHVTFPLFTKVDVNGDNAHPLFKFLK 95
[Close]
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Match: A0A2C9UCD3_MANES (Glutathione peroxidase n=2 Tax=Manihot esculenta TaxID=3983 RepID=A0A2C9UCD3_MANES)

HSP 1 Score: 129 bits (323), Expect = 7.330e-30
Identity = 60/102 (58.82%), Postives = 76/102 (74.51%), Query Frame = 2 
Query:    2 ELSLSSFKDNKVILVVNVASACGYTHRNYQELQPLYERHKRQGFTVLAFPCNQFGAQEPGSSSDILDFVTSRYSVTFPMLGKVEVNGPGAHPVFKFLKAASG 307
            E+SLS FK  KV+L+VNVAS CG T  NY EL  LYE++K QGF +LAFPCNQFG QEPGS+ +I  F  +R+   FP+  KV+VNGP   PV+KFLK+++G
Sbjct:   93 EVSLSKFK-GKVLLIVNVASKCGLTSSNYTELSHLYEKYKSQGFEILAFPCNQFGGQEPGSNPEIKQFACTRFKAEFPIFDKVDVNGPNTAPVYKFLKSSAG 193
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1417.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTW6_PYTOL3.240e-3462.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A835YHD0_9STRA1.910e-3363.11Glutathione peroxidase n=1 Tax=Tribonema minus Tax... [more]
H3G551_PHYRM2.430e-3162.63Glutathione peroxidase n=1 Tax=Phytophthora ramoru... [more]
A0A2P4XJ83_9STRA3.000e-3161.22Glutathione peroxidase n=1 Tax=Phytophthora palmiv... [more]
M4B8U8_HYAAE1.150e-3060.20Glutathione peroxidase n=1 Tax=Hyaloperonospora ar... [more]
K3WSD1_GLOUD1.250e-3060.20Glutathione peroxidase n=1 Tax=Globisporangium ult... [more]
A0A0P1B4P4_PLAHL1.250e-3060.20Glutathione peroxidase n=1 Tax=Plasmopara halstedi... [more]
D0NQR7_PHYIT2.540e-3061.05Glutathione peroxidase n=3 Tax=Phytophthora infest... [more]
G4ZTH2_PHYSP3.460e-3061.05Glutathione peroxidase n=4 Tax=Phytophthora TaxID=... [more]
A0A2C9UCD3_MANES7.330e-3058.82Glutathione peroxidase n=2 Tax=Manihot esculenta T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1417contigP-wetherbeei_contig1417:3..3891 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LG39
PFAMsAnk,Ank_2,Ank_4,Ank_5
Model size2675
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons6
Evalue2.32e-10
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Ec32 ortholog descriptionAnkyrin repeat
Ec32 orthologEc-11_002050.1
Descriptionspectrin binding
Cds size1488
COG categoryI
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1417.1.2prot_P-wetherbeei_contig1417.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1417 3..2266 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186011.3955498-CDS-P-wetherbeei_contig1417:2..1791683186011.3955498-CDS-P-wetherbeei_contig1417:2..179Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1417 3..179 -
1683186011.404385-CDS-P-wetherbeei_contig1417:392..10161683186011.404385-CDS-P-wetherbeei_contig1417:392..1016Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1417 393..1016 -
1683186011.4118068-CDS-P-wetherbeei_contig1417:1339..14361683186011.4118068-CDS-P-wetherbeei_contig1417:1339..1436Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1417 1340..1436 -
1683186011.4201477-CDS-P-wetherbeei_contig1417:1676..22661683186011.4201477-CDS-P-wetherbeei_contig1417:1676..2266Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1417 1677..2266 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186011.4293528-UTR-P-wetherbeei_contig1417:2266..28771683186011.4293528-UTR-P-wetherbeei_contig1417:2266..2877Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1417 2267..2877 -
1683186011.438352-UTR-P-wetherbeei_contig1417:3130..36711683186011.438352-UTR-P-wetherbeei_contig1417:3130..3671Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1417 3131..3671 -
1683186011.447382-UTR-P-wetherbeei_contig1417:3857..38911683186011.447382-UTR-P-wetherbeei_contig1417:3857..3891Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1417 3858..3891 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1417.1.2

>prot_P-wetherbeei_contig1417.1.2 ID=prot_P-wetherbeei_contig1417.1.2|Name=mRNA_P-wetherbeei_contig1417.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=496bp
MADDAYVVCNADSPREAGASTNRQRGDLLGDDISSSPPRYYLPAAQAALS
KMLYRKKKAMPADANEPTTGFTRLREAPAPSETGAEPEQRLSSIWDIAQR
GDLAALSRIIKASPESARLAHCDGWTPLHAAAEGGSDPAVSLLLRAVGGA
PPPRTLSASLWNAPDAPARMGLTPLHVASMKGNWQCVRTLLGGGADRDAR
ADDLRTPIHFACEVGAALCVKELLYAHAKVNVSDQYARTPLHFAAIEGSA
DCVRRCLAAGACPRIPDVWGRSPLLLAEMTGHEEVSALLRAAGGDTRGSG
GDASGSSPDSGCSSADGSTPSGCGEGDGDADVGKEEAPANKAPDGRRDGD
AAAMTAVIVAAGGNAHWDASGSATSTAAPSSRPLPSAPEAEDGALWIVQD
ETRRMLETKEGLVAAFRSMGDAADWANSLHLRSGAFQVVEIAASRLIDFV
RDVQFAILGDAPTDVAPAGGAASAAGGDSGLGGGWGTSSLAGSLGA
back to top

mRNA from alignment at P-wetherbeei_contig1417:3..3891-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1417.1.2 ID=mRNA_P-wetherbeei_contig1417.1.2|Name=mRNA_P-wetherbeei_contig1417.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3889bp|location=Sequence derived from alignment at P-wetherbeei_contig1417:3..3891- (Phaeothamnion wetherbeei SAG_119_79)
CGAGTTGTCCCTCTCCAGCTTCAAGGACAACAAGGCAAGTTCACACCTCG
TCCATCAGGATTCGGTATGGACCGTGGAGCAACTTTGTTGTTCTTACTTG
CATATCATTCATTACCTCCTGCAGCTTATCATTCGTTAGCTCCGCAGCCT
CAATGTTGCATTGCTTTCTATATCCTCTCTAACGCTATTATGCCATGATA
CTACTTCCCTCACATGTCAGGTTATCCTCGTTGTCAACGTGGCGAGTGCC
TGCGGCTACACGCATCGAAACTATCAGGAGCTTCAGCCGTTGTACGAACG
GCACAAGAGGCAAGGCTTCACGGTCCTCGCATTCCCTTGCAATCAGTTCG
GCGCACAGGAGCCCGGAAGCTCCTCGGATATCCTCGACTTTGTGACGTCG
CGCTATAGCGTTACATTTCCGATGCTGGGAAAGGTCGAGGTGAACGGTCC
TGGCGCTCACCCTGTCTTCAAATTCCTCAAGGCCGCTTCCGGCGACCCCA
CCGACATGTAAGCAAACGCGCGGTTCGCAATATGGTCTTCAACCTCCATT
GATCGGCTCGCACTGGGCGTCGAATATCTCAAGCTCGGTCGCCTCTTATG
CGTTCACTAAACGAGCCGATTAACCTCGCACACATCCCCTCGTGTTACCC
CGTCTAATAGCTCGATTCTCTTGCTATTGTTACTACATCGCTTTTGCCAT
TCTTTATCCCTCTCGGCCGCTCGGAAACGACATGCGCGCCGCATATGGCA
CCCTTCCTTCAGCCCGTGGAACTTTTCAAAGGTGAAAGGAGAAAATGTGC
TTTGCCTGCCAACTGCAGAAAGAAAGATTGACCGCGTCCGTCATTGTGCA
CTCGAGTCACCCATACTTGCCTGCTTTGTCGCTTTCGTCGCCTAATGGCT
CTTACGTCTTGTCAACGACTGTTGCCGGACGTGGTCCCTCCTTTCTGCTG
TGCCGCAGTTCCTGGTCGTGAACGGGCAGCCGGTGGCTCGGTATTCCCAC
GGCACGAACCCGAGCGAGATTGAGGCTGACATTGTGGAGGCGCTGCTGGC
CGGGGACGGAAGCCAGGGGGAGCTGTGAAGGGTAATGATTCCTAGAGTCC
ATGTAAGTATCCTTCTGCCGACTTATTTGTTGCATTCTTCACCTCACACG
AAAGGAAGTCTAATAAAGGGGGAACTTCTCTCCCGTCCTGAGCCGCATGA
CGGGAGGTCTACTCATCGTGCCTTGCTCTGGCCATTGTTGGCCTGTTGTG
GTGGTTGACGCACCCGCCGGTGACAGTCGCGGCGGCGGTGGCGGCTTCTG
CGACCGTGGCGGCGGCGGGGCGGCGGCAGGGCGGCGGCGGTGACGGTGCA
TGCGGCAGCGGACCAAGGCACCACCGTAGTACAGTGTATGTTGTTTTGGC
TGTTTGTGCGCCCGGAATGGTTCTGGACGCACTCAGTGAAAAGCGAGAAA
CGAAAATTCTCTCAACCAAGGTTTTCGAACGCGAAACGACGCCTTTGGCG
AATCTCTCCATGTATTAACCCACGCAGCCCCATACAGGACCTGAAAGCGC
TCGTTTTTGGAGAAGCGAAAAGGAAAGGATCATCAAGTCTTTCCATTGCT
CGTTCGCGACAGTCTTCGCGGAGAGATGGCCGACGATGCCTACGTCGTGT
GCAATGCTGATTCCCCGCGAGAAGCTGGCGCAAGCACAAACAGGCAACGA
GGTGATTTGTTGGGAGACGACATTTCGTCGTCTCCACCTCGGTATTATCT
CCCAGCAGCACAAGCCGCCCTTTCCAAGATGTTATACAGGAAGAAGAAAG
CGATGCCGGCAGACGCAAACGAGCCGACCACCGGCTTTACGCGTCTTAGG
GAGGCGCCTGCGCCGAGTGAGACCGGTGCGGAACCGGAGCAGCGGCTGTC
GTCCATCTGGGACATCGCACAGCGCGGTGACCTTGCGGCCCTCAGCCGAA
TCATAAAAGCTTCGCCGGAGTCGGCGCGCCTGGCGCATTGCGACGGATGG
ACGCCGCTGCACGCGGCCGCCGAAGGGGGATCGGATCCCGCGGTCTCCCT
CCTCCTCCGGGCGGTGGGCGGCGCCCCCCCCCCACGCACCCTGTCGGCAT
CGCTTTGGAACGCGCCCGACGCACCCGCACGCATGGGCCTGACGCCTCTC
CACGTCGCGAGCATGAAGGGCAACTGGCAATGCGTCCGGACGTTGCTCGG
CGGCGGAGCGGATAGGTAAGGTTGTTTTGGACTTGTCTTGAACGCTTTTT
TTCGTTGCAATGGGGGAAGGTTACAGCGGACAGGAAGACAGGAAGGTCCT
TTCTTTAAACTGCGGGAGGAATACTGCCTCACATAGTCAAGCTCTCCAAT
TTGCAGTTTCTTCCCCTAGCCTCTTCTGCACCTCAGTCAAAGTTCTTCGA
CGTAAAAAGATTAACTGCTAGCCCTCAAACTGCTCAATGACAATGCATTT
TGCAGGGACGCGAGGGCAGACGACCTGCGGACACCCATCCACTTCGCCTG
CGAGGTCGGTGCGGCACTCTGCGTGAAGGAATTGCTATATGCGCACGCCA
AGGTAAGGCCAGTTGCATAGTCTTGCGTAGTCTTGCAATGCACGCCATCG
GACCTTTCAAACGTTCAATTCGGCGTTACTTATCTCTTTGTCGCGGCACG
GCCATATGCGCGGGCACGGCCATGTGCGCTGTGCATTCTGGTTCAGCGAC
TCGATCTTCTGCTTGCTCCTCTCCTTCAGCTGGATAGAATGCTCTTCGCT
ACCTCCACTGTTGAGTTTTCCTTGGGTTGGCGTCACTTGCCCAGCGGCCA
TCCTCACACCGACCTCTTTTCTTCATGTCACATCCCTCCGACCGTGATCG
CCGGCCCCTCCACCGCCGGCCGCAGGTGAACGTTTCGGACCAGTACGCGC
GCACGCCGTTGCATTTCGCGGCGATCGAGGGCAGCGCGGACTGCGTGCGG
CGCTGCCTGGCGGCGGGGGCGTGCCCACGCATTCCGGACGTGTGGGGTCG
CTCGCCGCTGCTGCTGGCCGAAATGACCGGCCATGAGGAGGTTTCCGCGC
TGCTGCGGGCCGCGGGTGGCGACACTAGGGGCAGCGGCGGTGATGCCAGC
GGCAGCAGTCCCGACAGCGGTTGCAGCAGTGCCGACGGCAGCACCCCTAG
CGGCTGTGGCGAAGGAGACGGCGATGCCGATGTCGGTAAAGAAGAGGCGC
CAGCCAACAAGGCGCCAGACGGCAGGAGGGACGGCGACGCGGCGGCCATG
ACGGCCGTGATTGTCGCAGCGGGCGGGAATGCGCACTGGGATGCCTCGGG
CTCCGCCACAAGCACTGCGGCGCCGTCGTCGCGGCCGCTTCCGTCGGCCC
CGGAGGCAGAGGACGGCGCGCTGTGGATCGTGCAGGATGAGACCCGACGC
ATGCTGGAGACTAAAGAGGGGCTGGTGGCCGCGTTCCGGAGCATGGGTGA
CGCCGCCGACTGGGCCAATTCGCTGCATCTGCGGAGCGGCGCCTTTCAGG
TTGGTGCATTTGCAGCCATCGCCTTAATTTGCTGCTCAAAGGTTTCAGCT
TGCTGAGATGGGCTAGGCACTGAAGCTGCCAAGTGGAAGAACTGCTTTTT
TTATCCAACGGCGTTTTCAAACGAGGTTATATATTCCTTTCCAGTCCATC
TGAAAATGTTTCTTAGACGATTCCCTTGTATCATTCACCCTTGCATCGAC
CTACCCGTTCAGGTGGTGGAAATTGCGGCTTCTAGGCTCATTGACTTTGT
ACGAGACGTACAATTTGCAATCTTGGGCGACGCTCCGACCGACGTTGCTC
CAGCCGGCGGTGCTGCCAGCGCCGCCGGCGGCGACAGCGGCCTCGGTGGC
GGCTGGGGCACGAGCAGTTTAGCTGGCAGCCTGGGAGCG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1417:3..3891-

>mRNA_P-wetherbeei_contig1417.1.2 ID=mRNA_P-wetherbeei_contig1417.1.2|Name=mRNA_P-wetherbeei_contig1417.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1488bp|location=Sequence derived from alignment at P-wetherbeei_contig1417:3..3891- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCCGACGATGCCTACGTCGTGTGCAATGCTGATTCCCCGCGAGAAGC
TGGCGCAAGCACAAACAGGCAACGAGGTGATTTGTTGGGAGACGACATTT
CGTCGTCTCCACCTCGGTATTATCTCCCAGCAGCACAAGCCGCCCTTTCC
AAGATGTTATACAGGAAGAAGAAAGCGATGCCGGCAGACGCAAACGAGCC
GACCACCGGCTTTACGCGTCTTAGGGAGGCGCCTGCGCCGAGTGAGACCG
GTGCGGAACCGGAGCAGCGGCTGTCGTCCATCTGGGACATCGCACAGCGC
GGTGACCTTGCGGCCCTCAGCCGAATCATAAAAGCTTCGCCGGAGTCGGC
GCGCCTGGCGCATTGCGACGGATGGACGCCGCTGCACGCGGCCGCCGAAG
GGGGATCGGATCCCGCGGTCTCCCTCCTCCTCCGGGCGGTGGGCGGCGCC
CCCCCCCCACGCACCCTGTCGGCATCGCTTTGGAACGCGCCCGACGCACC
CGCACGCATGGGCCTGACGCCTCTCCACGTCGCGAGCATGAAGGGCAACT
GGCAATGCGTCCGGACGTTGCTCGGCGGCGGAGCGGATAGGGACGCGAGG
GCAGACGACCTGCGGACACCCATCCACTTCGCCTGCGAGGTCGGTGCGGC
ACTCTGCGTGAAGGAATTGCTATATGCGCACGCCAAGGTGAACGTTTCGG
ACCAGTACGCGCGCACGCCGTTGCATTTCGCGGCGATCGAGGGCAGCGCG
GACTGCGTGCGGCGCTGCCTGGCGGCGGGGGCGTGCCCACGCATTCCGGA
CGTGTGGGGTCGCTCGCCGCTGCTGCTGGCCGAAATGACCGGCCATGAGG
AGGTTTCCGCGCTGCTGCGGGCCGCGGGTGGCGACACTAGGGGCAGCGGC
GGTGATGCCAGCGGCAGCAGTCCCGACAGCGGTTGCAGCAGTGCCGACGG
CAGCACCCCTAGCGGCTGTGGCGAAGGAGACGGCGATGCCGATGTCGGTA
AAGAAGAGGCGCCAGCCAACAAGGCGCCAGACGGCAGGAGGGACGGCGAC
GCGGCGGCCATGACGGCCGTGATTGTCGCAGCGGGCGGGAATGCGCACTG
GGATGCCTCGGGCTCCGCCACAAGCACTGCGGCGCCGTCGTCGCGGCCGC
TTCCGTCGGCCCCGGAGGCAGAGGACGGCGCGCTGTGGATCGTGCAGGAT
GAGACCCGACGCATGCTGGAGACTAAAGAGGGGCTGGTGGCCGCGTTCCG
GAGCATGGGTGACGCCGCCGACTGGGCCAATTCGCTGCATCTGCGGAGCG
GCGCCTTTCAGGTGGTGGAAATTGCGGCTTCTAGGCTCATTGACTTTGTA
CGAGACGTACAATTTGCAATCTTGGGCGACGCTCCGACCGACGTTGCTCC
AGCCGGCGGTGCTGCCAGCGCCGCCGGCGGCGACAGCGGCCTCGGTGGCG
GCTGGGGCACGAGCAGTTTAGCTGGCAGCCTGGGAGCG
back to top