mRNA_P-wetherbeei_contig14155.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: W7U8D1_9STRA (Mitochondrial carrier protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U8D1_9STRA) HSP 1 Score: 181 bits (458), Expect = 2.140e-52 Identity = 111/232 (47.84%), Postives = 135/232 (58.19%), Query Frame = 1
Query: 1 ETAAVRLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPV----LRDAATGEATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
ET RL+AGA AGGVA ACYPLDL+RTRL Q YR I HA +IA EG+ GLYRGLGT+L V VP+LA+SY IYGT+KE + +A+ E +L CGA SG+ SSL+TYP+DV+RRR+QI G + P G H G GP EL+ I+ HEG RGLYRGL PELLKV PM+ TF TYE+M++ L
Sbjct: 120 ETPFTRLIAGACAGGVACSACYPLDLIRTRLTIQDEGPGREYRSIGHAFRKIAASEGLGGLYRGLGTTLMVAVPNLAISYCIYGTMKEVIYHYKYPSRDVTEASEEEPHFLESLVCGATSGICSSLITYPMDVLRRRLQILG--------------------------LHP-----GNHRPGETVGPWNELKTILKHEGPRGLYRGLLPELLKVTPMVGCTFTTYELMKDVL 320
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: A0A7S2XV38_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV38_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.260e-48 Identity = 110/258 (42.64%), Postives = 140/258 (54.26%), Query Frame = 1
Query: 1 ETAAVRLLAGASAGGVATCACYPLDLVRTRLATQHVSQA-------------------GYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVP--------VLRD---AATGEATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
ET R ++GA AG A C CYPLDLVRTRL TQ Q YYRGI HAL RI+ EEG GLYRGLGT+L V VP+LA+S ++YGTLK+K +P V+ + + T E + T+ CG+ SG+ +SLVT+P+DV+RRRMQI G E I P GP++E++ ++ EG RGLYRGLA E+LKV PM+ TF TYE MR+ L
Sbjct: 107 ETPFTRFISGAIAGATACCVCYPLDLVRTRLTTQKTPQPVAVQSAPIPGAAATTVVGEPYYRGIFHALQRISKEEGYLGLYRGLGTTLGVAVPNLAISLSVYGTLKDKFLNMPQRSYLRKFVIEENGASITVELSPLGTMMCGSTSGICASLVTFPIDVIRRRMQIEG-------------------LLETKGEIRP-------------HGPLDEVKIVLRREGIRGLYRGLATEVLKVVPMVGCTFLTYEAMRDML 332
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: A0A6U3R4F3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A6U3R4F3_9STRA) HSP 1 Score: 159 bits (403), Expect = 5.090e-44 Identity = 104/238 (43.70%), Postives = 136/238 (57.14%), Query Frame = 1
Query: 1 ETAAVRLLAGASAGGVATCACYPLDLVRTRLATQHVSQAG---YYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLK-------EKAATVPVLRDAATGEATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
+T A+RL +GA+AG +A CYPLDLVRTRLATQ G YYRGI+HA RI +EG+ G+Y GL T+L VQVP+LA+SY++YG L+ E +R ++ G L CGAASG++S+L+T+P DVVRRRMQ+ QP L PT R P+EE+ +I EG GLYRGL PELLK PM+ TF YE++ ++L
Sbjct: 139 DTTAIRLCSGATAGAMACSICYPLDLVRTRLATQISQPDGGKPYYRGIVHAHYRIVADEGLLGIYGGLCTTLAVQVPNLAISYSVYGFLQDIIGKRNEDNEGHEKVRGSSVGT-----NLCCGAASGISSTLITFPADVVRRRMQL------------QPLHRL------------PTD----------FRTPLEEMLHISRAEGLEGLYRGLTPELLKAVPMVGCTFMVYELLMDRL 337
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: A0A6U4JKN7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4JKN7_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.880e-43 Identity = 100/228 (43.86%), Postives = 134/228 (58.77%), Query Frame = 1
Query: 1 ETAAVRLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPV-LRDAATGEATTAATLAC--GAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMR 675
E+A RL AGA+AGG+A ACYPLDLVRTRL TQ + A +Y GI +I EGV GLYRGLG +L VQ+P+LA+SY++YGT KE + + + GE +A +C GAA+G+ASSL+T+PLDV+RRR Q+ G + DG+ R P+ +L +I +G GLYRG+ PE+LKV P++ LTF TYE +R
Sbjct: 135 ESAWSRLAAGAAAGGIACTACYPLDLVRTRLTTQ-IPGAAFYDGIADCAYKITKYEGVLGLYRGLGATLAVQIPNLALSYSVYGTAKEAFLQRGLFVVKGSEGERKISAAGSCVSGAAAGIASSLLTFPLDVIRRRQQVVGLHSRVR---------------------------DGVV----SRSPLADLHHIFLSDGVSGLYRGILPEILKVIPVVSLTFVTYEGLR 330
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: W4FG36_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FG36_9STRA) HSP 1 Score: 157 bits (396), Expect = 1.020e-42 Identity = 92/223 (41.26%), Postives = 134/223 (60.09%), Query Frame = 1
Query: 16 RLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPVLRDAATGEATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
R ++GA A +T CYP+DL+RTRL TQ + YRGI HA RI EEG GLYRGL +L V VP++A+++T++ +LK+ V LR+ AT + TL+CGA SG++SS+VT+P+DVVRRRMQI+G L + ++T+ A ++ + + + +G RG YRGL PELLKV PM+ +TFGT++M+++ L
Sbjct: 166 RFVSGAVAAATSTTVCYPIDLIRTRLITQ-LDNNIRYRGISHAFHRIRAEEGTRGLYRGLSATLLVTVPNMAINFTVFESLKDA---VQALREDATTPLSALDTLSCGALSGISSSIVTFPVDVVRRRMQISG---------------LHHGSGKETAAEAAQATATAWGI----------AKELYQQQGVRGFYRGLTPELLKVIPMVGITFGTFDMLKQSL 359
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: A0A662XSX2_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XSX2_9STRA) HSP 1 Score: 154 bits (388), Expect = 2.590e-41 Identity = 100/234 (42.74%), Postives = 133/234 (56.84%), Query Frame = 1
Query: 28 GASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATV----------PVLRDAATGEAT-----TAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
GA AG VAT ACYP+DL+RTRLATQ S Y GI HA+ RI EEG GLYRG+G +L V VP+LA+++T+Y +LKE+A P R+AA + TL CG +G+ASSL+T+P+DVVRRR+QI +A H +++GI PT PV + +G RG YRGL PEL+KV PM+ +TFGT+E +++ L
Sbjct: 184 GALAGAVATVACYPIDLIRTRLATQLNSDIRY-TGIRHAVQRIRAEEGARGLYRGMGATLMVTVPNLAINFTLYESLKERARAFRRDQRLVGLDPADREAAANQYDDTHLGVVDTLLCGGTAGIASSLLTFPIDVVRRRLQI----SAIHA---------------ESAGIQPT--------------PVGIASELFRSQGIRGFYRGLTPELMKVVPMVGITFGTFERLKKLL 383
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: A0A5D6XG49_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XG49_9STRA) HSP 1 Score: 152 bits (384), Expect = 6.180e-41 Identity = 97/232 (41.81%), Postives = 129/232 (55.60%), Query Frame = 1
Query: 16 RLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPVLRDAATG-----------EATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMRE 678
+ ++GA AG AT ACYP+DL+RTRLATQ S Y+ GI HA RI EEGV GLYRGLG +L V VP+LA+++T+Y TLK + + R G + TL CG +G+ASSLVT+P+DVVRRR+QI+G A H GI PT PV ++ +G +G YRGL PEL+KV PM+ +TFG +E +++
Sbjct: 164 QFVSGAVAGATATIACYPIDLIRTRLATQLNSDIRYH-GIRHAAQRIRAEEGVRGLYRGLGATLAVTVPNLAINFTLYETLKGRM--MAFRRKGRLGLNEDEIEEVNHHLSVVDTLVCGGLAGIASSLVTFPIDVVRRRLQISGIHATLH-------------------GIPPT--------------PVGIATELLRTQGVQGFYRGLTPELMKVVPMVGITFGMFERLKK 359
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: G4ZEZ4_PHYSP (Uncharacterized protein n=14 Tax=Phytophthora TaxID=4783 RepID=G4ZEZ4_PHYSP) HSP 1 Score: 151 bits (382), Expect = 1.940e-40 Identity = 105/244 (43.03%), Postives = 139/244 (56.97%), Query Frame = 1
Query: 1 ETAAVRLLA-GASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAAT----------VPVLRDAAT-----GEATTAATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
ET+ + + A GA AG AT ACYP+DL+RTRLATQ S Y GI HA+ RI+ EEGV GLYRG+G +L V VP+LA+++T+Y +LK+ A T V R+ A TL CG +G+ASSL+T+P+DVVRRR+QI +A H Q++GI PT S G EL +G RG YRGL PEL+KV PM+ +TFGT+E +++ L
Sbjct: 173 ETSWMTMFASGALAGATATVACYPIDLIRTRLATQLNSDIRY-TGIRHAVQRISAEEGVLGLYRGMGATLMVTVPNLAINFTLYESLKDYARTFRRSQALAGLTGVEREQAAEMHDGAHLCVTDTLLCGGTAGIASSLLTFPIDVVRRRLQI----SAIHA---------------QSAGIKPTPS-----------GIASEL---FQTQGVRGFYRGLTPELMKVVPMVGITFGTFERLKKLL 382
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: B8BZB2_THAPS (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BZB2_THAPS) HSP 1 Score: 149 bits (377), Expect = 2.150e-40 Identity = 99/230 (43.04%), Postives = 126/230 (54.78%), Query Frame = 1
Query: 16 RLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPV---LR--DAATGEATTA--ATLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMREKL 684
RL+AGA AG A ACYPLDLVRTRL TQ Q +Y+GI A +I EGV GLY G+ +L V VPS ++SY +YG+LKE A + LR D TGE TL CGAASG+ S+LVT+P D VRRRMQI Q+ AP + G V+ +R + +G +G YRG+ PE+LKV PM+ F YEM+++KL
Sbjct: 117 RLVAGAVAGSTACVACYPLDLVRTRLTTQLDGQE-HYKGITDAFVKIVRSEGVLGLYSGIAPTLMVAVPSFSISYMVYGSLKEYALEDELFYNLRKVDTVTGEEKLGFQLTLMCGAASGILSTLVTFPFDTVRRRMQI------------------------QSLHFAPHEQISG----------VQMMRRLFKSDGLKGFYRGITPEVLKVIPMVSTMFTVYEMLKDKL 311
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Match: K3WLW9_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLW9_GLOUD) HSP 1 Score: 150 bits (378), Expect = 4.860e-40 Identity = 95/233 (40.77%), Postives = 126/233 (54.08%), Query Frame = 1
Query: 16 RLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTRIAGEEGVAGLYRGLGTSLCVQVPSLAMSYTIYGTLKEKAATVPVLRDAATGEATTAA-------------TLACGAASGVASSLVTYPLDVVRRRMQIAGGRAACHLVVAQPASLLRKAAFEQTSGIAPTSSVDGLHVHGHLRGPVEELRYIVAHEGARGLYRGLAPELLKVCPMICLTFGTYEMMR 675
+ +GA AG VAT ACYP+DL+RTRLATQ S Y+ GI HA RI EEG+ GLYRGLG +L V VP+LA+++T+Y LK T ++ + E A TL CG +G+ASSLVT+P+DVVRRR+QI+G +H HG PV ++ +G RG YRGL PEL+KV PM+ +TFG +E ++
Sbjct: 163 QFASGALAGAVATIACYPIDLIRTRLATQLNSDIRYH-GIRHAAQRIRAEEGLLGLYRGLGATLAVTVPNLAINFTLYEALKGHVRTFRKVQRSLGLEGDEKAAMDDEGFHIGVMDTLVCGGVAGIASSLVTFPIDVVRRRLQISG-----------------------------------IHAHGIPPTPVGIASELLQTQGIRGFYRGLTPELMKVVPMVGITFGMFERLK 359 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14155.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14155.1.1 >prot_P-wetherbeei_contig14155.1.1 ID=prot_P-wetherbeei_contig14155.1.1|Name=mRNA_P-wetherbeei_contig14155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp ETAAVRLLAGASAGGVATCACYPLDLVRTRLATQHVSQAGYYRGILHALTback to top mRNA from alignment at P-wetherbeei_contig14155:224..1657+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14155.1.1 ID=mRNA_P-wetherbeei_contig14155.1.1|Name=mRNA_P-wetherbeei_contig14155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1434bp|location=Sequence derived from alignment at P-wetherbeei_contig14155:224..1657+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14155:224..1657+ >mRNA_P-wetherbeei_contig14155.1.1 ID=mRNA_P-wetherbeei_contig14155.1.1|Name=mRNA_P-wetherbeei_contig14155.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig14155:224..1657+ (Phaeothamnion wetherbeei SAG_119_79)back to top |