mRNA_P-wetherbeei_contig14152.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14152.2.1
Unique NamemRNA_P-wetherbeei_contig14152.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A2R5GUQ1_9STRA (Ankyrin repeat domain-containing protein 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUQ1_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 8.830e-7
Identity = 31/66 (46.97%), Postives = 38/66 (57.58%), Query Frame = 1
Query:   58 QALVNAGASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGADHAARDDDSRTPAEYIDN-TVRTAF 252
            Q LVNAGA ++  + K +TP+H ACE GHV  A  LL  GA   ARD D   P E      +R+AF
Sbjct:  176 QELVNAGAVLEACNDKKRTPMHEACEGGHVETASALLELGASPDARDVDGHLPVELAKTQALRSAF 241          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A6G0Z0E9_APHCR (Ankyrin repeat and death domain-containing protein 1A-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0Z0E9_APHCR)

HSP 1 Score: 52.4 bits (124), Expect = 1.200e-6
Identity = 21/38 (55.26%), Postives = 30/38 (78.95%), Query Frame = 1
Query:  103 KGKTPLHWACERGHVAVAGWLLGNGADHAARDDDSRTP 216
            +G+TPLH ACE+GHV V  +LLG+GAD  A+D++  +P
Sbjct:   47 QGRTPLHSACEKGHVDVVEFLLGHGADMLAKDEEQNSP 84          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A6P8ISK9_ACTTE (ankyrin repeat domain-containing protein 46-like n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8ISK9_ACTTE)

HSP 1 Score: 53.5 bits (127), Expect = 1.750e-6
Identity = 31/73 (42.47%), Postives = 42/73 (57.53%), Query Frame = 1
Query:    1 NKVSSLFQKLYPFRSILEAQALVNAGASV--KCRDCKGKTPLHWACERGHVAVAGWLLGNGADHAARDDDSRT 213
            N++S L Q       I++ + LVN+G     KCRD +G+TPLH A  RG+V +   LL NG D   RDD+  T
Sbjct:    7 NQLSPLIQACMD-NDIVQVEKLVNSGKVCVSKCRDHRGRTPLHLAAFRGNVNMISLLLENGGDLWTRDDNGNT 78          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A7J6SJA4_PEROL (Uncharacterized protein n=1 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6SJA4_PEROL)

HSP 1 Score: 52.0 bits (123), Expect = 6.030e-6
Identity = 29/61 (47.54%), Postives = 38/61 (62.30%), Query Frame = 1
Query:   40 RSILEAQALVNAGASVK-CRDCKGK-TPLHWACERGHVAVAGWLLGNGADHAARDDDSRTP 216
            + +++  A+V  GASV  C   KG  TPLH+A   GHVA+A +LL NGAD  A+  D  TP
Sbjct:   25 KCLVDRGAVVECGASVNYCGGSKGGWTPLHFAAFNGHVAIAKFLLENGADPNAQSTDGETP 85          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: UPI001CB89C4C (acyl-CoA-binding domain-containing protein 1-like n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB89C4C)

HSP 1 Score: 51.6 bits (122), Expect = 1.320e-5
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1
Query:   67 VNAGASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGAD 183
            V AG SV  +D +G+TPLHWA +RGH+ VA  LL   AD
Sbjct:  219 VQAGVSVDAKDSEGRTPLHWAVDRGHIDVAELLLSRNAD 257          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A2U1PH01_ARTAN (Acyl-CoA-binding protein, ACBP n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PH01_ARTAN)

HSP 1 Score: 51.2 bits (121), Expect = 1.400e-5
Identity = 22/39 (56.41%), Postives = 27/39 (69.23%), Query Frame = 1
Query:   67 VNAGASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGAD 183
            V AG SV  +D +G+TPLHWA +RGH+ VA  LL   AD
Sbjct:  134 VEAGISVDAKDSEGRTPLHWAVDRGHIDVAELLLNRNAD 172          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A2T7NV49_POMCA (Uncharacterized protein n=1 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7NV49_POMCA)

HSP 1 Score: 51.6 bits (122), Expect = 1.520e-5
Identity = 26/61 (42.62%), Postives = 36/61 (59.02%), Query Frame = 1
Query:   43 SILEAQALVNAGASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGADHAARDDDSRTPAEY 225
            S+L  Q LV+  A    RDC+G+TPLH+AC++GH A    L+  GA+    D+  R P  Y
Sbjct: 1196 SLLLQQPLVDLNA----RDCQGRTPLHFACKKGHYAFIEQLVACGANVLVEDNKGRPPLYY 1252          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A132BDE8_9HELO (Ankyrin n=1 Tax=Mollisia scopiformis TaxID=149040 RepID=A0A132BDE8_9HELO)

HSP 1 Score: 51.6 bits (122), Expect = 1.530e-5
Identity = 21/35 (60.00%), Postives = 26/35 (74.29%), Query Frame = 1
Query:   76 GASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGA 180
            G +V  RD + +TPLHWAC RGHV++   LLGNGA
Sbjct:  557 GTAVDIRDGEDRTPLHWACARGHVSMVSLLLGNGA 591          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: UPI001C4B300D (acyl-CoA-binding domain-containing protein 2-like isoform X3 n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4B300D)

HSP 1 Score: 51.2 bits (121), Expect = 1.860e-5
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 1
Query:   76 GASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGADHAARDDDSRTP 216
            GASV  RD +G+TPLHWA +RGH+ V   LL   AD  A+     TP
Sbjct:  239 GASVNSRDSEGRTPLHWAVDRGHINVVQTLLDKNADVNAKKFQLPTP 285          
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Match: A0A2C5YAE2_9HYPO (Uncharacterized protein n=1 Tax=Ophiocordyceps camponoti-rufipedis TaxID=2004952 RepID=A0A2C5YAE2_9HYPO)

HSP 1 Score: 51.2 bits (121), Expect = 1.880e-5
Identity = 23/63 (36.51%), Postives = 34/63 (53.97%), Query Frame = 1
Query:   64 LVNAGASVKCRDCKGKTPLHWACERGHVAVAGWLLGNGADHAARD-DDSRTPAEYIDNTVRTA 249
            LV AG+ +   D  GKTPLHWA ++G +    WL+ +GAD      +   T  +Y +  +R A
Sbjct:  264 LVRAGSDINAVDLAGKTPLHWAADKGALRAIEWLMRHGADDGVEACETGMTALDYAERRLREA 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14152.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2R5GUQ1_9STRA8.830e-746.97Ankyrin repeat domain-containing protein 1 n=1 Tax... [more]
A0A6G0Z0E9_APHCR1.200e-655.26Ankyrin repeat and death domain-containing protein... [more]
A0A6P8ISK9_ACTTE1.750e-642.47ankyrin repeat domain-containing protein 46-like n... [more]
A0A7J6SJA4_PEROL6.030e-647.54Uncharacterized protein n=1 Tax=Perkinsus olseni T... [more]
UPI001CB89C4C1.320e-556.41acyl-CoA-binding domain-containing protein 1-like ... [more]
A0A2U1PH01_ARTAN1.400e-556.41Acyl-CoA-binding protein, ACBP n=1 Tax=Artemisia a... [more]
A0A2T7NV49_POMCA1.520e-542.62Uncharacterized protein n=1 Tax=Pomacea canalicula... [more]
A0A132BDE8_9HELO1.530e-560.00Ankyrin n=1 Tax=Mollisia scopiformis TaxID=149040 ... [more]
UPI001C4B300D1.860e-551.06acyl-CoA-binding domain-containing protein 2-like ... [more]
A0A2C5YAE2_9HYPO1.880e-536.51Uncharacterized protein n=1 Tax=Ophiocordyceps cam... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14152contigP-wetherbeei_contig14152:1382..1651 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog38033.XP_001227418.1
PFAMsAnk,Ank_2,Ank_3,Ank_4
Model size270
Max annot lvl2759|Eukaryota
KEGG koko:K16460
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.03e-07
EggNOG OGsCOG0666@1|root,KOG4177@2759|Eukaryota
Descriptionspectrin binding
Cds size270
COG categoryI
BRITEko00000,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186010.9289024-CDS-P-wetherbeei_contig14152:1381..16511683186010.9289024-CDS-P-wetherbeei_contig14152:1381..1651Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14152 1382..1651 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14152.2.1prot_P-wetherbeei_contig14152.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14152 1382..1651 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14152.2.1

>prot_P-wetherbeei_contig14152.2.1 ID=prot_P-wetherbeei_contig14152.2.1|Name=mRNA_P-wetherbeei_contig14152.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=90bp
NKVSSLFQKLYPFRSILEAQALVNAGASVKCRDCKGKTPLHWACERGHVA
VAGWLLGNGADHAARDDDSRTPAEYIDNTVRTAFPGQAA*
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mRNA from alignment at P-wetherbeei_contig14152:1382..1651-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14152.2.1 ID=mRNA_P-wetherbeei_contig14152.2.1|Name=mRNA_P-wetherbeei_contig14152.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig14152:1382..1651- (Phaeothamnion wetherbeei SAG_119_79)
AACAAAGTCAGTAGTTTGTTCCAAAAACTCTATCCTTTCCGGTCAATCTT GGAAGCGCAGGCGCTGGTGAATGCTGGAGCAAGCGTCAAGTGCCGCGATT GTAAAGGGAAGACGCCGCTCCACTGGGCGTGCGAGCGCGGTCACGTCGCC GTCGCCGGCTGGCTGCTCGGCAACGGCGCCGATCACGCCGCGCGGGACGA CGACAGCCGCACTCCGGCCGAATACATTGACAACACGGTTCGTACTGCGT TCCCAGGGCAGGCGGCCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14152:1382..1651-

>mRNA_P-wetherbeei_contig14152.2.1 ID=mRNA_P-wetherbeei_contig14152.2.1|Name=mRNA_P-wetherbeei_contig14152.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=270bp|location=Sequence derived from alignment at P-wetherbeei_contig14152:1382..1651- (Phaeothamnion wetherbeei SAG_119_79)
AACAAAGTCAGTAGTTTGTTCCAAAAACTCTATCCTTTCCGGTCAATCTT
GGAAGCGCAGGCGCTGGTGAATGCTGGAGCAAGCGTCAAGTGCCGCGATT
GTAAAGGGAAGACGCCGCTCCACTGGGCGTGCGAGCGCGGTCACGTCGCC
GTCGCCGGCTGGCTGCTCGGCAACGGCGCCGATCACGCCGCGCGGGACGA
CGACAGCCGCACTCCGGCCGAATACATTGACAACACGGTTCGTACTGCGT
TCCCAGGGCAGGCGGCCTAG
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