mRNA_P-wetherbeei_contig14121.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14121.1.1
Unique NamemRNA_P-wetherbeei_contig14121.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A835Z520_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z520_9STRA)

HSP 1 Score: 164 bits (414), Expect = 4.390e-49
Identity = 77/113 (68.14%), Postives = 90/113 (79.65%), Query Frame = 1
Query:   16 RPIPAHPRWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            +P P H RWS PW+ EQALLCTVFAITGSSS+ LVRP L  I G+EG+ R+GPWSYR  S +LVSP+YT +LL  G+ AGRH +FA +ARRMWGRFLP PL  +VGCTPAKIK
Sbjct:   32 QPAPQHKRWSAPWFGEQALLCTVFAITGSSSMYLVRPFLPKI-GLEGSWREGPWSYRIGSFILVSPIYTALLLLTGSLAGRHNYFAAIARRMWGRFLPRPLAERVGCTPAKIK 143          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A7S3W7F3_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3W7F3_9SPIT)

HSP 1 Score: 144 bits (362), Expect = 7.130e-42
Identity = 66/112 (58.93%), Postives = 89/112 (79.46%), Query Frame = 1
Query:   40 WST---PWWREQA----LLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            W+T   P W+E      ++CTVFA+TGS+SVA+VRP LK   G+EG++R+GPWSYR  S++LVSP+Y  +L+T GTAAGRHTFFA+MAR+++GRFLPP L  +VGC PA++K
Sbjct:   29 WTTQPRPSWKENGVEAIIICTVFAVTGSTSVAVVRPFLKHTIGLEGSMREGPWSYRIFSLLLVSPIYATLLVTFGTAAGRHTFFASMARKIFGRFLPPALARRVGCGPAQMK 140          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A8J1ZW36_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J1ZW36_9DINO)

HSP 1 Score: 136 bits (342), Expect = 2.090e-36
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 1
Query:   25 PAHPRWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKI 351
            P   RWS  WW +  L CTVFAITG+SSV LVRPAL  + G+ G+L+DGP SYR  S+ LVSPVYTLILLT+GT AGRHT+FA MA++MW RFLP     K+ C PA +
Sbjct:  217 PERARWSQDWWLDGLLKCTVFAITGTSSVTLVRPALAKV-GLVGSLKDGPNSYRVLSIFLVSPVYTLILLTVGTLAGRHTYFAKMAQKMWRRFLPARWVDKMLCPPACV 324          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A8J1ZWE1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1ZWE1_9DINO)

HSP 1 Score: 130 bits (327), Expect = 7.200e-36
Identity = 63/108 (58.33%), Postives = 80/108 (74.07%), Query Frame = 1
Query:   31 HPRWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            H RWS  W+ +  + CTVFAITG++SV LVRPAL    G++G+L+DGP SYR  S+ +VSP+YT+ILLT+GT AGRH FFAN+A+RMW RFLP     K+ C PA  K
Sbjct:   93 HKRWSRGWFLDALIKCTVFAITGTTSVTLVRPALAKC-GVQGSLKDGPNSYRVLSLTVVSPIYTVILLTIGTVAGRHNFFANVAQRMWRRFLPQRWVDKMLCPPATRK 199          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A7S2D5C5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D5C5_9STRA)

HSP 1 Score: 128 bits (321), Expect = 3.720e-35
Identity = 63/112 (56.25%), Postives = 78/112 (69.64%), Query Frame = 1
Query:   40 WST---PWWREQ----ALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            W+T   P WRE     A++ TVF ITGSSSVALVRPALK   G+EGT+ +GPWSYR  S++ VSPVY  +LLT+GT AGRHTFF+ MA  ++GRFLP  +   + C P   K
Sbjct:   54 WTTQKRPSWREDMGEAAVIFTVFGITGSSSVALVRPALKHTIGLEGTMSEGPWSYRIGSILAVSPVYACVLLTVGTVAGRHTFFSMMATNIFGRFLPSSVSKYIACPPVLAK 165          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A7S0EHZ5_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EHZ5_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 7.260e-35
Identity = 61/106 (57.55%), Postives = 75/106 (70.75%), Query Frame = 1
Query:   49 PWWREQ----ALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            P WRE     A++  VF ITGS+SVA VRPALK   G+EG++R+GPWSYR  SV+LVSP+Y   L+T GT AGRH FFA MAR+++GRFLP   R    C PA+ K
Sbjct:   74 PHWRENRTEAAVIFCVFGITGSTSVAFVRPALKHTIGLEGSMREGPWSYRVLSVVLVSPIYAAFLVTFGTLAGRHIFFAGMARKIFGRFLPSQYRGYAACPPARAK 179          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A5J4YKR9_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YKR9_PORPP)

HSP 1 Score: 124 bits (312), Expect = 1.130e-33
Identity = 59/110 (53.64%), Postives = 76/110 (69.09%), Query Frame = 1
Query:   25 PAHPRWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGCTPAKIK 354
            P   ++S  W  ++  LC VF I G++SV +VRPAL  + G+EG +RDGPWSYR  SV+ VSP+Y+LILLT GT AGRH FFA +  RMW RFLP  +  +V C PA+ K
Sbjct:   84 PQLAKYSVEWVLDKLFLCVVFGIVGTTSVRVVRPALNKM-GLEGNMRDGPWSYRIGSVLAVSPIYSLILLTTGTLAGRHAFFARVVYRMWNRFLPSKVLHRVICRPAQQK 192          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A7S2CGE4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CGE4_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.130e-33
Identity = 60/106 (56.60%), Postives = 78/106 (73.58%), Query Frame = 1
Query:   37 RWST---PWWRE----QALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVG 333
            RW+T   P W+E     A++  VF  TGSSSVALVRPALK+  G+EG +RDGPWSYR AS++ VSPVY  +L+T GT AGRHTFF+ MA +++GRF+P  L  ++G
Sbjct:   49 RWTTQPRPSWKECKTEAAVIFCVFGATGSSSVALVRPALKNTIGLEGNMRDGPWSYRIASIICVSPVYACVLVTFGTVAGRHTFFSAMAGKIFGRFIPSALGRRLG 154          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A7S2SP63_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP63_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.930e-31
Identity = 58/102 (56.86%), Postives = 73/102 (71.57%), Query Frame = 1
Query:   43 STPWWREQ----ALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLRAKVGC 336
            S P WRE     A+   VF +TGSSSVALVRPAL+ + G EG++ +GPWSYR  S ++VSP+Y  +LLT GT AGRHTFFA +A + +GRFLP  L  K+GC
Sbjct:   62 SRPSWREDKVEAAVAFVVFGVTGSSSVALVRPALQRV-GFEGSMWEGPWSYRIGSFLIVSPIYACLLLTFGTLAGRHTFFAALAGKSFGRFLPSKLAEKIGC 162          
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Match: A0A1Y1YZ79_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YZ79_9FUNG)

HSP 1 Score: 117 bits (293), Expect = 2.130e-31
Identity = 51/95 (53.68%), Postives = 70/95 (73.68%), Query Frame = 1
Query:   37 RWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGIEGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGRFLPPPLR 321
            RWS PWW+E +++ TVFAITGSS+V +VRP LK+  GIEG+ ++GPWSYR A +    P+Y+ +L+T+GT  GR  +F  +A RMWGRF+P   R
Sbjct:   47 RWSWPWWKEWSIIMTVFAITGSSTVKIVRPVLKNGFGIEGSWKEGPWSYRGAYLATTLPLYSCVLVTVGTLFGRRPYFQRIALRMWGRFVPKKYR 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14121.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z520_9STRA4.390e-4968.14Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3W7F3_9SPIT7.130e-4258.93Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]
A0A8J1ZW36_9DINO2.090e-3661.47Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A8J1ZWE1_9DINO7.200e-3658.33Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S2D5C5_9STRA3.720e-3556.25Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S0EHZ5_9EUKA7.260e-3557.55Hypothetical protein n=1 Tax=Phaeocystis antarctic... [more]
A0A5J4YKR9_PORPP1.130e-3353.64Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
A0A7S2CGE4_9STRA1.130e-3356.60Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2SP63_9STRA1.930e-3156.86Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Y1YZ79_9FUNG2.130e-3153.68Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14121contigP-wetherbeei_contig14121:123..476 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog227086.JGI_V11_91083
Preferred nameglrx-22
PFAMsDUF547,Glutaredoxin
Model size354
Max annot lvl2759|Eukaryota
KEGG koko:K03676
Hectar predicted targeting categorysignal anchor
Exons1
Evalue2e-32
EggNOG OGsCOG0695@1|root,KOG1752@2759|Eukaryota
Descriptionprotein disulfide oxidoreductase activity
Cds size354
COG categoryO
BRITEko00000,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.8425896-CDS-P-wetherbeei_contig14121:122..4761683186009.8425896-CDS-P-wetherbeei_contig14121:122..476Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14121 123..476 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14121.1.1prot_P-wetherbeei_contig14121.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14121 123..476 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14121.1.1

>prot_P-wetherbeei_contig14121.1.1 ID=prot_P-wetherbeei_contig14121.1.1|Name=mRNA_P-wetherbeei_contig14121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=118bp
PPSPCRPIPAHPRWSTPWWREQALLCTVFAITGSSSVALVRPALKSITGI
EGTLRDGPWSYRFASVMLVSPVYTLILLTLGTAAGRHTFFANMARRMWGR
FLPPPLRAKVGCTPAKIK
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mRNA from alignment at P-wetherbeei_contig14121:123..476-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14121.1.1 ID=mRNA_P-wetherbeei_contig14121.1.1|Name=mRNA_P-wetherbeei_contig14121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig14121:123..476- (Phaeothamnion wetherbeei SAG_119_79)
CCCCCATCCCCGTGCAGGCCCATCCCCGCCCACCCGAGGTGGTCGACCCC GTGGTGGCGCGAGCAGGCGCTGCTATGCACAGTGTTTGCCATCACTGGCA GCTCATCCGTCGCCCTCGTGCGGCCGGCGCTCAAGAGCATCACGGGCATT GAGGGAACGCTTCGCGACGGGCCCTGGAGCTACCGGTTCGCCAGCGTTAT GCTGGTGTCGCCCGTCTACACGCTCATTCTGCTGACGTTGGGCACAGCGG CCGGGCGGCATACCTTCTTTGCCAACATGGCGAGGCGAATGTGGGGCCGC TTCCTGCCGCCGCCGTTGCGGGCGAAGGTCGGGTGTACTCCGGCGAAGAT AAAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14121:123..476-

>mRNA_P-wetherbeei_contig14121.1.1 ID=mRNA_P-wetherbeei_contig14121.1.1|Name=mRNA_P-wetherbeei_contig14121.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=354bp|location=Sequence derived from alignment at P-wetherbeei_contig14121:123..476- (Phaeothamnion wetherbeei SAG_119_79)
CCCCCATCCCCGTGCAGGCCCATCCCCGCCCACCCGAGGTGGTCGACCCC
GTGGTGGCGCGAGCAGGCGCTGCTATGCACAGTGTTTGCCATCACTGGCA
GCTCATCCGTCGCCCTCGTGCGGCCGGCGCTCAAGAGCATCACGGGCATT
GAGGGAACGCTTCGCGACGGGCCCTGGAGCTACCGGTTCGCCAGCGTTAT
GCTGGTGTCGCCCGTCTACACGCTCATTCTGCTGACGTTGGGCACAGCGG
CCGGGCGGCATACCTTCTTTGCCAACATGGCGAGGCGAATGTGGGGCCGC
TTCCTGCCGCCGCCGTTGCGGGCGAAGGTCGGGTGTACTCCGGCGAAGAT
AAAG
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