mRNA_P-wetherbeei_contig14112.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14112.1.1
Unique NamemRNA_P-wetherbeei_contig14112.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A521W594_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A521W594_9PROT)

HSP 1 Score: 214 bits (546), Expect = 7.180e-69
Identity = 107/136 (78.68%), Postives = 123/136 (90.44%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P N+PNL TW RIL+IPLIVG+FYLP+ WL  E +NIAAT +FV+AA+TDWLDGYLAR L+Q SAFGAFLDPVADKLMVA AL+VLLQL RVE +VALIIIGREIAISALREWMA++GQ+KSVAVA+IGK+KTVGQ
Sbjct:    2 PLNIPNLFTWLRILLIPLIVGLFYLPDVWLSYEGRNIAATVVFVIAAVTDWLDGYLARALNQASAFGAFLDPVADKLMVAAALIVLLQLGRVETVVALIIIGREIAISALREWMAKIGQAKSVAVAFIGKVKTVGQ 137
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BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A521VNW2_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VNW2_9PROT)

HSP 1 Score: 209 bits (533), Expect = 6.820e-67
Identity = 102/136 (75.00%), Postives = 121/136 (88.97%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P N+PNL TW RIL+IPLIVG+FYLP+ WL  E +N+AAT +FV+AA+TDWLDGYLARVL+Q+SAFGAFLDPVADKLM+A +L++LLQL RV+ +V LIIIGREIAISALREWMA MGQ+KSVAVA IGK+KTV Q
Sbjct:    2 PLNIPNLFTWLRILLIPLIVGLFYLPDEWLSYEGRNVAATVVFVIAAVTDWLDGYLARVLNQVSAFGAFLDPVADKLMIAASLIILLQLGRVDAVVGLIIIGREIAISALREWMATMGQAKSVAVALIGKVKTVSQ 137
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BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F4E3G6_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_67_28 TaxID=1797503 RepID=A0A1F4E3G6_9PROT)

HSP 1 Score: 209 bits (532), Expect = 9.680e-67
Identity = 103/136 (75.74%), Postives = 122/136 (89.71%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P N+PNLVTW RIL+IPLIVG++YLP++WL   +KN  ATA+FV AA+TDWLDGYLAR L+QMSAFGAFLDPVADKLM+A AL+VLLQL+RVE +V LIIIGREIAISALREWMAQ+G+SK+VAVA+IGK+KT  Q
Sbjct:    2 PLNVPNLVTWLRILLIPLIVGIYYLPDAWLAYGDKNATATAVFVFAALTDWLDGYLARALNQMSAFGAFLDPVADKLMIAAALIVLLQLERVEAVVGLIIIGREIAISALREWMAQVGRSKNVAVAFIGKVKTASQ 137
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BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: UPI001987A9D5 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI001987A9D5)

HSP 1 Score: 205 bits (522), Expect = 3.660e-65
Identity = 106/136 (77.94%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P NLPNLVT  RIL+IPLIVG+FYLP++WL  E KNI AT IF+ AAITDWLDGYLAR LDQMSAFGAF DPVADKL+V GAL+VLL L+RV+ +VALIIIGREI ISALREWMA +G SKSVAVA+IGKLKTV Q
Sbjct:    2 PLNLPNLVTLLRILLIPLIVGIFYLPDAWLSFEGKNILATGIFIFAAITDWLDGYLARKLDQMSAFGAFFDPVADKLVVVGALIVLLHLNRVDMVVALIIIGREIVISALREWMATLGHSKSVAVAFIGKLKTVLQ 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F4CP54_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CP54_9PROT)

HSP 1 Score: 204 bits (520), Expect = 6.910e-65
Identity = 102/136 (75.00%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P N PNLVT  RI++IPLI+G++YLPE WL  + KN+AAT +F++AA TDWLDGYLAR LDQ+SAFGAFLDPVADKL+V GALV LL L RV+ LVALII+GREIAISALREWMA++GQ+KSVAVA+IGKLKTVGQ
Sbjct:    2 PLNAPNLVTLSRIILIPLIIGLYYLPEEWLSYQGKNLAATVVFILAAATDWLDGYLARRLDQISAFGAFLDPVADKLIVVGALVALLHLGRVDMLVALIIVGREIAISALREWMAKVGQAKSVAVAFIGKLKTVGQ 137
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BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F4B594_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4B594_9PROT)

HSP 1 Score: 203 bits (517), Expect = 1.850e-64
Identity = 101/136 (74.26%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P N+PNLVT  RIL+IPLIVG+FYLP+ WL    +N+AAT  FV+AA+TDWLDGYLAR L+QMSAFGAFLDPVADKLM+A +L+VLLQL RV+ +VALIIIGREIAISALREWMAQ+GQ+KSVAVA++GK+KT  Q
Sbjct:    2 PLNIPNLVTCLRILLIPLIVGLFYLPDEWLSMGERNVAATVAFVIAALTDWLDGYLARALNQMSAFGAFLDPVADKLMIAASLIVLLQLGRVDAVVALIIIGREIAISALREWMAQVGQAKSVAVAFVGKVKTTMQ 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F3YP33_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YP33_9PROT)

HSP 1 Score: 203 bits (517), Expect = 1.850e-64
Identity = 105/136 (77.21%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P NLPNL+T  RIL+IPLIVGVFYLP++WL  + KNIAATA+F+VAAITDWLDGYLAR L+QMSAFGAF DPVADKL+V GAL+VLLQL RV+ +V LIIIGREIAISALREWMA +G+ +SVAVA IGKLKTV Q
Sbjct:    2 PLNLPNLITLLRILLIPLIVGVFYLPDAWLAYDGKNIAATAVFIVAAITDWLDGYLARRLNQMSAFGAFFDPVADKLVVVGALIVLLQLGRVDMVVGLIIIGREIAISALREWMATVGRGRSVAVALIGKLKTVIQ 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F4D866_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4D866_9PROT)

HSP 1 Score: 201 bits (510), Expect = 2.440e-63
Identity = 97/136 (71.32%), Postives = 119/136 (87.50%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P NLPNL+TW RI++IPL VG+FY  +SW+ A N+N+ AT IF VAAITDWLDG+LAR LDQ SAFGAFLDPVADKLMVA AL+ L+QL+RV+ L+ALIIIGRE+A+SALREWMA +G+SKSVAV+++GK+KTV Q
Sbjct:    2 PLNLPNLLTWLRIILIPLFVGIFYFEKSWVSAPNQNLVATIIFTVAAITDWLDGWLARKLDQTSAFGAFLDPVADKLMVAAALITLVQLERVDALIALIIIGREMAVSALREWMATIGESKSVAVSFLGKIKTVSQ 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: A0A1F4BGK4_9PROT (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BGK4_9PROT)

HSP 1 Score: 200 bits (508), Expect = 4.470e-63
Identity = 94/136 (69.12%), Postives = 120/136 (88.24%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P NLPNL+TW RIL+IPL VG+FY  +SW+   N+N+ AT IF VAAITDWLDG+LAR L+QMSAFGAFLDPVADKLMVA AL++L+QL+RV+ ++ALIIIGRE+A+SALREWMAQ+G++KS+AV+++GK+KT  Q
Sbjct:    2 PLNLPNLLTWLRILLIPLFVGIFYFEKSWVSIANQNLVATIIFTVAAITDWLDGWLARRLNQMSAFGAFLDPVADKLMVAAALIILVQLERVDAIIALIIIGREVAVSALREWMAQIGEAKSIAVSFLGKIKTTSQ 137
[Close]
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Match: UPI0019A1B733 (CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Prolixibacteraceae bacterium TaxID=2053594 RepID=UPI0019A1B733)

HSP 1 Score: 199 bits (507), Expect = 6.340e-63
Identity = 98/136 (72.06%), Postives = 118/136 (86.76%), Query Frame = 1 
Query:   16 PHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVVAAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPLVALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ 423
            P NLPNLVTW RILMIPLIVGV+YLP  W+   NKN+AATAIF +AAITDWLDGYLAR L+Q S+FGAFLDPVADKLMVA AL++L+  + +   +A+IIIGREIAISALREWMA++G+SKSVAV+++GK+KTV Q
Sbjct:    2 PLNLPNLVTWLRILMIPLIVGVYYLPHDWIADHNKNLAATAIFSIAAITDWLDGYLARTLNQTSSFGAFLDPVADKLMVATALIILVDQNHLPSFIAMIIIGREIAISALREWMARIGKSKSVAVSFLGKVKTVSQ 137
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14112.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521W594_9PROT7.180e-6978.68CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A521VNW2_9PROT6.820e-6775.00CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F4E3G6_9PROT9.680e-6775.74CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
UPI001987A9D53.660e-6577.94CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F4CP54_9PROT6.910e-6575.00CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F4B594_9PROT1.850e-6474.26CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F3YP33_9PROT1.850e-6477.21CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F4D866_9PROT2.440e-6371.32CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
A0A1F4BGK4_9PROT4.470e-6369.12CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]
UPI0019A1B7336.340e-6372.06CDP-diacylglycerol--glycerol-3-phosphate 3-phospha... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14112contigP-wetherbeei_contig14112:2..424 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog261292.Nit79A3_2151
Preferred namepgsA
PFAMsCDP-OH_P_transf
Model size423
Max annot lvl28216|Betaproteobacteria
KEGG rclassRC00002,RC00017,RC02795
KEGG koko:K00995,ko:K08744
KEGG ReactionR01801,R02030
KEGG Pathwayko00564,ko01100,map00564,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.6e-64
EggNOG OGsCOG0558@1|root,COG0558@2|Bacteria,1RCZ7@1224|Proteobacteria,2VQI2@28216|Betaproteobacteria,372TT@32003|Nitrosomonadales
EC2.7.8.41,2.7.8.5
DescriptionBelongs to the CDP-alcohol phosphatidyltransferase class-I family
Cds size423
COG categoryI
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.6097748-CDS-P-wetherbeei_contig14112:1..4241683186009.6097748-CDS-P-wetherbeei_contig14112:1..424Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14112 2..424 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14112.1.1prot_P-wetherbeei_contig14112.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14112 2..424 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14112.1.1

>prot_P-wetherbeei_contig14112.1.1 ID=prot_P-wetherbeei_contig14112.1.1|Name=mRNA_P-wetherbeei_contig14112.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=141bp
MQSNVPHNLPNLVTWCRILMIPLIVGVFYLPESWLQAENKNIAATAIFVV
AAITDWLDGYLARVLDQMSAFGAFLDPVADKLMVAGALVVLLQLDRVEPL
VALIIIGREIAISALREWMAQMGQSKSVAVAYIGKLKTVGQ
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mRNA from alignment at P-wetherbeei_contig14112:2..424-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14112.1.1 ID=mRNA_P-wetherbeei_contig14112.1.1|Name=mRNA_P-wetherbeei_contig14112.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig14112:2..424- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGAGCAACGTCCCCCACAACCTCCCGAACCTGGTCACCTGGTGCAG
GATCCTGATGATCCCGCTGATCGTCGGCGTGTTCTACCTGCCTGAGTCCT
GGCTGCAGGCCGAGAATAAGAACATCGCCGCCACCGCGATCTTCGTGGTC
GCCGCCATCACCGACTGGCTGGACGGCTACCTCGCACGCGTGCTCGACCA
GATGTCAGCCTTCGGCGCGTTCCTCGACCCCGTGGCCGACAAGCTGATGG
TCGCGGGTGCCCTGGTCGTCCTGCTGCAGCTCGATCGGGTCGAGCCGCTG
GTCGCGCTGATCATCATTGGCCGCGAAATAGCGATTTCGGCGCTGCGCGA
GTGGATGGCGCAGATGGGCCAGTCCAAGAGCGTCGCGGTGGCCTACATCG
GCAAGCTGAAGACGGTGGGGCAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14112:2..424-

>mRNA_P-wetherbeei_contig14112.1.1 ID=mRNA_P-wetherbeei_contig14112.1.1|Name=mRNA_P-wetherbeei_contig14112.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=423bp|location=Sequence derived from alignment at P-wetherbeei_contig14112:2..424- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGAGCAACGTCCCCCACAACCTCCCGAACCTGGTCACCTGGTGCAG
GATCCTGATGATCCCGCTGATCGTCGGCGTGTTCTACCTGCCTGAGTCCT
GGCTGCAGGCCGAGAATAAGAACATCGCCGCCACCGCGATCTTCGTGGTC
GCCGCCATCACCGACTGGCTGGACGGCTACCTCGCACGCGTGCTCGACCA
GATGTCAGCCTTCGGCGCGTTCCTCGACCCCGTGGCCGACAAGCTGATGG
TCGCGGGTGCCCTGGTCGTCCTGCTGCAGCTCGATCGGGTCGAGCCGCTG
GTCGCGCTGATCATCATTGGCCGCGAAATAGCGATTTCGGCGCTGCGCGA
GTGGATGGCGCAGATGGGCCAGTCCAAGAGCGTCGCGGTGGCCTACATCG
GCAAGCTGAAGACGGTGGGGCAG
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