mRNA_P-wetherbeei_contig1411.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A836CLX4_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLX4_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.830e-32 Identity = 85/191 (44.50%), Postives = 106/191 (55.50%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQ---GEHFFGGGDSFVFSSLGWGG-------------------GRGGASPLGNT-CFMFCD-HRGIGMGGG-PGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFV 498
+LS V ALA LP W+LL+SLD HG++L TLLA CA +PTL+A+AD G VFGGFA GA WSR G F+G G+SF+FS L G G + + CF++ D RG GMGGG GGEF ++DD+L GTSG C TF N L+S F + LE+W FV
Sbjct: 1045 LLSPEMVTALAMRLPRAQAGSDWRLLFSLDRHGSALATLLALCADAQPTLVAIADARGTVFGGFAAGAAWSRPSAHGGPGFYGSGESFLFSFLRCEGPTAVRIWRWNPPASAXXXXXXGAVAHRDSADCFLYSDPSRGFGMGGGGAGGEFGWYVDDSLSSGTSGSCGTFRNDCLSSEREFAVMGLEVWAFV 1235
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A024GE06_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GE06_9STRA) HSP 1 Score: 112 bits (281), Expect = 9.260e-26 Identity = 69/171 (40.35%), Postives = 94/171 (54.97%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGAS------PLGNTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGF 495
+L+L V L + LP T +W L+YS D G+SL+TLL + PTLL + D VFGGFA+ W R H++G G+SF+FS + G S N FMFC + MGGG G F +FLD+ L GT+G C+TFG+ LA + F C+ +E+W F
Sbjct: 765 ILTLDHVARLDQHLPITTQLCNWYLVYSTDRDGSSLDTLLIMSESKYPTLLVVKDANDNVFGGFASDV-WRRSS--HYYGNGESFLFSF------QAGLSLTVYPWSRRNNYFMFCSEEALMMGGG--GNFGLFLDNDLHCGTTGACETFGSLPLAPTQDFYCMQVELWAF 924
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A6A4EWR5_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A4EWR5_9STRA) HSP 1 Score: 110 bits (276), Expect = 4.410e-25 Identity = 67/177 (37.85%), Postives = 95/177 (53.67%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLG----------NTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVN 501
+L+L + + +LP T W +YS++A+G+SL TLL + PTLL + D G VFGGFA+ W R H++G G+SF+FS +S G N+ FM C + MGGG G F +FLD L RG+SG C+T+ + L +S F CV +E+WGF
Sbjct: 886 ILTLEHIAYIDHALPITSQLCRWFRIYSIEANGSSLETLLILAQKQSPTLLVVKDADGNVFGGFASDE-WHRAF--HYYGTGESFLFSFAN-------SSTAGGFVKYQWSRKNSYFMLCSDESLIMGGG--GNFGLFLDSDLSRGSSGACETYNSPPLTTSQDFSCVHVELWGFTT 1050
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A5D6XY19_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XY19_9STRA) HSP 1 Score: 110 bits (275), Expect = 6.050e-25 Identity = 70/180 (38.89%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFS--------SLGWGGGRGGASPLG----NTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVNA 504
+L+L V L ++P T W LLYS +A+G+SL+TLL G+ PTLL + D G VFGGFA+ W R ++G G++F+F+ GGG GG + N F C + MGGG G F +FLD L G++G C+TF + L SS F CV +E+WGF +
Sbjct: 937 ILTLEHVARLDSAVPITCQLCRWCLLYSSEANGSSLHTLLMLSRGQSPTLLVIKDDLGHVFGGFASDE-WRRAT--QYYGNGETFLFTFGHRGQGPHSSSGGGTGGFTKFPWSRRNNYFQLCSEESLVMGGG--GSFGLFLDYDLSSGSTGACETFSSRPLVSSQEFSCVHVEVWGFTTS 1111
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A0N7L380_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L380_PLAHL) HSP 1 Score: 110 bits (274), Expect = 8.180e-25 Identity = 66/170 (38.82%), Postives = 91/170 (53.53%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGAS---PLGNTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVN 501
+L+ + + +LP T W +YS++A+G+SL TLL + PTLL + D G VFGGFA+ W R +++G G+SF+FS G N+ FM C + MGGG G F +FLD L RGTSG C+TF + L S F CV +E+WGF
Sbjct: 877 ILTADHIACIDHALPITTQLCRWYKIYSVEANGSSLETLLTLAKKQSPTLLVVKDAKGNVFGGFASDE-WHRAF--NYYGTGESFLFSFANTSAAGGFVKYQWSRKNSYFMLCSDESLIMGGG--GNFGLFLDSDLSRGTSGACETFNSPPLTVSQEFSCVQVELWGFTT 1041
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A225X5E2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X5E2_9STRA) HSP 1 Score: 110 bits (274), Expect = 8.180e-25 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLG------------NTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVN 501
+L+L + + +LP T W +YS++A+G+SL TLL + PTLL + D G VFGGFA+ W H++G G+SF+FS A P N+ FM C + MGGG G F +FLD L GTSG C+TF + L +S F CV +E+WGF +
Sbjct: 880 ILTLEHIAFIDHALPITTQLCRWYRIYSVEANGSSLETLLILAKKQSPTLLVVKDAKGNVFGGFASDE-WHHAF--HYYGTGESFLFSF---------ADPSAAGGFVKYQWSRKNSYFMLCSEESLIMGGG--GNFGLFLDSDLSAGTSGACETFNSPPLTTSQEFSCVQVELWGFTS 1044
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: D0MQX0_PHYIT (Uncharacterized protein n=56 Tax=Phytophthora TaxID=4783 RepID=D0MQX0_PHYIT) HSP 1 Score: 109 bits (273), Expect = 1.110e-24 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLG------------NTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVN 501
+L + + + +LP T W +YS++A+G+SL TLL + PTLL + D G VFGG+A+ W H++G G+SF+FS ASP N+ FM C + MGGG G F +FLD L RGTSG C+TF + L +S F CV +E+WGF
Sbjct: 807 ILEIEHLAYIDHALPITSQLCRWYRIYSVEANGSSLETLLILARKQSPTLLVVKDAQGNVFGGYASDE-WHHAF--HYYGTGESFLFSF---------ASPSAAGGFVKYQWSRKNSYFMLCSDESLIMGGG--GNFGLFLDSDLSRGTSGACETFNSPPLTTSQEFSCVQVELWGFTT 971
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A7S1XQU5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQU5_9STRA) HSP 1 Score: 103 bits (257), Expect = 3.140e-23 Identity = 70/168 (41.67%), Postives = 93/168 (55.36%), Query Frame = 1
Query: 1 VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGR---EPTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLGNTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARL--ASSSPFECVALEMW 489
+L P + L +LP+ L W L YS+ HGASL L ARC R P++LA+AD GAVFG +AT A W R++G ++GGG +FVFS G G + + + C+ CD I +GGG G AI +D L G G TFGN L A+ F C+ LE+W
Sbjct: 174 ILLAPHLAELDAALPENLRGGSWALRYSMKRHGASLAALYARCGARGDDAPSVLAIADDEGAVFGAYATHA-W-RDRGAEWYGGGGTFVFSFAGGEGLKVFGATGADECYQRCDAGTICVGGGDG---AIRVDAELLHGRCGASPTFGNGVLTGAAEPSFRCLRLEVW 336
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A1U8AGM8_NELNU (nuclear receptor coactivator 7-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8AGM8_NELNU) HSP 1 Score: 98.6 bits (244), Expect = 3.040e-21 Identity = 64/157 (40.76%), Postives = 86/157 (54.78%), Query Frame = 1
Query: 37 SLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGRE-PTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLGNTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVNA 504
SLP+ + W LLYS+ HG SL TL+ + A P LL + D GAVFGG P + + G +FVF+++ +G R + N F C + +GGG G FA+ LD L RGTSGPC+TFGN LA S FE +E+WGF ++
Sbjct: 228 SLPNIVKGCQWALLYSMTKHGLSLRTLIRKSADLPGPCLLIVGDMQGAVFGGLLE-CPLKPTTTKKYQGTNQTFVFTTI-YGQPRLFRATGANRYFYLCSDDLLALGGG--GNFALCLDGDLLRGTSGPCETFGNLCLAHSPEFELKNVELWGFTHS 380
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Match: A0A7J7CRI3_TRIWF (TLDc domain-containing protein n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7CRI3_TRIWF) HSP 1 Score: 96.7 bits (239), Expect = 8.250e-21 Identity = 67/158 (42.41%), Postives = 85/158 (53.80%), Query Frame = 1
Query: 37 SLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGRE-PTLLALADRGGAVFGGFATGAPWSREQGEHFFGGGDSFVFSSLGWGGGRGGASPLG-NTCFMFCDHRGIGMGGGPGGEFAIFLDDALCRGTSGPCQTFGNARLASSSPFECVALEMWGFVNA 504
SLP+ + R W LLYS HG SL TL + A P LL D GAVFGG P + G +FVF+++ +G R P G N + C + + +GGG G FA+ LD L RGTSGPC+TFGN LA S FE +E+WGF +A
Sbjct: 176 SLPNIVMGRRWVLLYSTSKHGISLRTLTRKSADLPGPCLLIAGDMRGAVFGGLLE-CPLKPTAKRKYQGTHQTFVFTTI-YGAPRI-FRPTGVNRYYYLCLNDLLALGGG--GNFALCLDGDLLRGTSGPCETFGNLCLAHSEEFELKNVELWGFAHA 328 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1411.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1411.4.1 >prot_P-wetherbeei_contig1411.4.1 ID=prot_P-wetherbeei_contig1411.4.1|Name=mRNA_P-wetherbeei_contig1411.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp VLSLPQVHALARSLPDTLCTRHWQLLYSLDAHGASLNTLLARCAGREPTLback to top mRNA from alignment at P-wetherbeei_contig1411:6315..6896- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1411.4.1 ID=mRNA_P-wetherbeei_contig1411.4.1|Name=mRNA_P-wetherbeei_contig1411.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig1411:6315..6896- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1411:6315..6896- >mRNA_P-wetherbeei_contig1411.4.1 ID=mRNA_P-wetherbeei_contig1411.4.1|Name=mRNA_P-wetherbeei_contig1411.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig1411:6315..6896- (Phaeothamnion wetherbeei SAG_119_79)back to top |