mRNA_P-wetherbeei_contig14108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00056FF33A (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xenophilus azovorans TaxID=151755 RepID=UPI00056FF33A) HSP 1 Score: 249 bits (637), Expect = 1.320e-78 Identity = 129/268 (48.13%), Postives = 171/268 (63.81%), Query Frame = 1
Query: 7 RVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
R++ W PV+V +AG G+ +GT VA+A PDGHT+GM + A +NPAIR +PYDTV D+ GVS + +A A VAH S+PA V IA AK + LSY TPG+GTL H+SG L + AGI LLHVPY S A AD+L+G+ L F +W V+ VR+ ++KVLGV KERL+ P P IAETL G E +S G++ P+ +VD+V AD +AVV+ ++R FGME VGSSP YD I E+A W V+ A ++
Sbjct: 57 RLSDRWQQPVVVDNRAGGGSAIGTNVVAKAAPDGHTIGMVVMAHVVNPAIRNDLPYDTVGDLVGVSQITTSACALVAHPSLPADTVAELIALAKAHPNT-LSYATPGVGTLNHVSGALLNQQAGIDLLHVPYGGSAAAHADVLSGRVPLMFDVWAPVKEYVRSGRLKVLGVTLKERLASDPTYPAIAETLPGFEVVSAFGMVTSSKVPRPIVDRVGADIAAVVKEEAFAAKVRDFGMEPVGSSPQDYDRFIRTEIARWSRVVKAANIQ 323
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI000878A691 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hydrogenophaga sp. PML113 TaxID=1899350 RepID=UPI000878A691) HSP 1 Score: 247 bits (631), Expect = 9.690e-78 Identity = 122/269 (45.35%), Postives = 174/269 (64.68%), Query Frame = 1
Query: 4 DRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
+R+++ W PV++ +AG G+ +GT VA+A DGHT+GM + A +NPAIR+ +PYDT+ D+ GVS + +A VAH SVPA++V+ IA +K + + LSY TPG GTL H+SG L AG LLHVPY S A AD+L+G+ L F +W V VRA ++KVLG+ K+R+ P PTIAET+ G E +S G++ P+ V+DK+ AD +AVV+ P ++R FGME VGSSP +YD I E++ W V+ + +K
Sbjct: 53 ERLSEKWKQPVVIENRAGGGSTIGTNLVAKAPADGHTIGMVVMAHVVNPAIRSDLPYDTLGDLAGVSQITTSACVLVAHPSVPANNVRELIALSKAQPAT-LSYATPGAGTLNHMSGALLNSLAGTDLLHVPYGGSAAAHADVLSGRVPLMFDVWAPVREYVRAGRLKVLGITLKDRMPSDPTYPTIAETVPGFEVVSAFGMVTSSKVPRPVIDKLGADIAAVVKEPTFAAKVRDFGMEPVGSSPQEYDRFIRSEVSRWSRVVRESNIK 320
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI001AD790D3 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium neotropicale TaxID=1497615 RepID=UPI001AD790D3) HSP 1 Score: 236 bits (601), Expect = 3.350e-73 Identity = 120/272 (44.12%), Postives = 170/272 (62.50%), Query Frame = 1
Query: 1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
SD + W PVIV K GAGT++GT+AVA++ PDGHT+G+ I+A INPA+RA MP+DTVRD+RG++ LA A M VA+ S PA D+ + A+T+ L+Y TPG T H++ EL Q+ A IK+LHVPY S A+ D+LA + L F +W SV+ VR + +KVLGV N R+ + P+ I ET G E S G++ P TP V+ +++D A V+SP + FGM+AVGS+P +D + E+ WK + A ++ N
Sbjct: 53 SDAMAAKWSVPVIVENKPGAGTLIGTDAVAKSAPDGHTIGVVITAHVINPAVRAQMPFDTVRDLRGLTQLAEAHMVVVANPSFPADDIPGLVKAARTQNE-PLAYATPGPATATHMAAELLQKMADIKMLHVPYNGSANALTDVLANRVPLMFDVWHSVQQHVREKTIKVLGVTNATRIPNAPQYACIGETYPGYEANSMFGLVVPAKTPDLAVNALSSDLIAFVKSPGFAAKADAFGMQAVGSTPQDFDRFVVGEIDKWKKIASDANIRLN 323
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A1J5S353_9ZZZZ (Tripartite tricarboxylate transporter family receptor n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5S353_9ZZZZ) HSP 1 Score: 235 bits (599), Expect = 6.320e-73 Identity = 117/270 (43.33%), Postives = 177/270 (65.56%), Query Frame = 1
Query: 1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
S+++ WG PVIVV K GAGT+LGT VA++ PDG+TLG+ +SA INP +R MPYDTV+D+ GVSL A + + VA+ S P +++ IA AK ++ +L++ T GIGT H++GE+ + AGI +LHVPY A +++AG+ + F + P +++ K+K L V +R P +PTIAETL G+ET S +G++ P TP+ VV+K++AD + V+Q PD+R R+ GM VG++P Q+DA+I E+ W V+ +G +
Sbjct: 51 SEKLGTLWGKPVIVVYKPGAGTMLGTNYVAKSAPDGYTLGVVVSAHVINPTLRTKMPYDTVKDLSGVSLAATSQLVLVANPSFPPNNLAELIALAK-KEPGKLTFATSGIGTAMHLTGEMIKRQAGIDMLHVPYNGGAPAYVEVMAGRVPMLFDTLFAALPYIKSGKLKALAVSGAQRDPIAPNIPTIAETLPGIETRSIIGIVVPHATPRDVVEKISADLAKVLQMPDLRARMSEIGMTPVGTTPEQFDAIIRSEIVKWGKVVKSSGAR 319
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00041C1F26 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Azohydromonas australica TaxID=364039 RepID=UPI00041C1F26) HSP 1 Score: 233 bits (594), Expect = 3.930e-72 Identity = 119/272 (43.75%), Postives = 175/272 (64.34%), Query Frame = 1
Query: 1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
++R+ WG PV+V K GAGT+LGT+ VA++ PDG+TLGMAI+A INPA++ +PYDT +D+ GV+ ++ A AH S+P S+V IAYAK +LSY TPG+GT H++GE+ AGI ++HVPY+ S A D+L G+ L F + S P V+ K+KV+ + + +R P +P +AET+ G +S +GVIAP G P+ ++++++AD V+S ++ R+ GME VGSSP YDAVI E+ W V+ A +KP
Sbjct: 54 AERLQAQWGQPVVVDYKPGAGTMLGTDFVAKSAPDGYTLGMAITAHMINPALQPKLPYDTTKDLVGVAQVSQAHFGLFAHPSLPVSNVSELIAYAKKNPG-KLSYATPGMGTGTHLAGEMLNHMAGIDMVHVPYKGSAAAQQDVLGGRVPLLFDVLFSSMPFVKDGKLKVIALSSPKRALASPDIPLVAETVPGFSAMSFIGVIAPAGVPRPLLNQISADIGKAVRSTELSGRLVELGMEPVGSSPEAYDAVIRSEIDKWSRVVKAANIKPE 324
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00131CA44E (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131CA44E) HSP 1 Score: 230 bits (586), Expect = 5.760e-71 Identity = 116/268 (43.28%), Postives = 175/268 (65.30%), Query Frame = 1
Query: 1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAG 804
+ R+ +W PVIV K GAGT+LGT+ VA+A+PDG+T GM +SA INP++R +PYDT++D VS + M A+ S PA+++ IA AK ++ ++ Y + G GT H+ E+ + AGI LLHVPY+ A D++ GQ L ++ S PL++A K+K + +F+ R + P +PTI+ET+ GV +S +G++AP TP +V K +AD +AV++SPD ER+R G+EAVGS+PAQ+DAVI ++A W V+ +G
Sbjct: 51 AQRLGAAWKQPVIVDNKPGAGTVLGTDYVAKAQPDGYTFGMVVSAHAINPSLRPNLPYDTLKDFAAVSEIGVQHMVIAANPSFPANNLAELIALAK-KEPGQIGYASSGSGTALHLGMEMLKTQAGIDLLHVPYKGGAPAQQDVVGGQVPLLVDIYHSSAPLIQAGKLKAIALFSPTRPASIPNIPTISETVPGVSALSVIGIVAPAATPPAIVAKASADMAAVIRSPDFVERLRGMGVEAVGSTPAQFDAVIRADIARWAPVVKSSG 317
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A556AFE4_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Verticiella sediminum TaxID=1247510 RepID=A0A556AFE4_9BURK) HSP 1 Score: 228 bits (581), Expect = 3.070e-70 Identity = 114/265 (43.02%), Postives = 169/265 (63.77%), Query Frame = 1
Query: 16 KSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
++W PV+V K GAGT++G VA+A DGHT G+ ISA TINPAIR+ MPYDT+R++ G++ +A A MA VA A P DV + YA+ + +L+Y TPG GT H++GE+F+ AAG +++HVPY S A+ DL+ G+ L F + SV P V+A K+K+L V R + P PTIAETL G E S +G++AP TP+ + + D + V+ P+VR ++ G+ VGSSPA+++ I +++ W V +G++
Sbjct: 54 RTWQQPVVVENKPGAGTMIGAATVAKAPADGHTFGIVISAYTINPAIRSKMPYDTLRELTGITQVARANMALVAPADAPFDDVPGLVRYAQAHQG-QLTYATPGPGTATHLAGEMFKRAAGAEIVHVPYNGSGPALTDLIGGRVDLMFDIVHSVRPHVQAGKLKLLAVTAGARDPEMPDTPTIAETLPGFEIYSTIGLVAPAATPEATIATLQRDVAGVLAQPEVRSKLAELGVTPVGSSPAEWNDFIRQDIQRWTEVARASGIR 317
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A4Z0BF27_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0BF27_9BURK) HSP 1 Score: 227 bits (578), Expect = 1.140e-69 Identity = 121/264 (45.83%), Postives = 167/264 (63.26%), Query Frame = 1
Query: 19 SWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
SW PV++ K G GT LGT AVA+A DG+TLGMAISALTINP++ A +PYDT RDI GVS +A A AH S+P + + I YAK +LSY TPG GT H++GE+ A +KL+HVPY+ S A D++ G+ L F + S P V+ ++KVL + + +R P +P IAE++ G +S +GVIAP G P ++ K++AD V+SP+V R+ GME VGS+ QY+A+IA E+ W V+ AG+K
Sbjct: 64 SWKQPVVLDYKPGGGTTLGTNAVAKAPADGYTLGMAISALTINPSLVANLPYDTRRDIVGVSQVAQAHFGLFAHPSLPVNSMPELIKYAKDNPG-KLSYATPGAGTGTHLAGEMLGHMADLKLVHVPYKGSAPAQQDVIGGRVPLLFDVLFSSMPFVKDNRLKVLALSSPQRAVSSPDIPLIAESVPGFSAMSLIGVIAPAGLPPELLRKISADIGQAVRSPEVTSRMAQLGMEPVGSTSDQYNALIASEIDKWARVIKTAGIK 326
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A4V2EAP0_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium sp. Leo121 TaxID=1571195 RepID=A0A4V2EAP0_9BRAD) HSP 1 Score: 233 bits (594), Expect = 3.170e-69 Identity = 118/272 (43.38%), Postives = 168/272 (61.76%), Query Frame = 1
Query: 1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
SD + W PVIV K GAGT++GT+ VA++ PDGHT+G+ I+A INPA+RA MP+DTVRD+RG++ LA A M VA+ S PA D+ + A+T+ L+Y TPG T H++ EL Q+ A IK+LHVPY S A+ D+LA + L F +W SV+ VR + +KVLGV N R+ + P+ I ET G E S G++ P TP V+ +++D A V+SP + FGM+ VGS+P +D + E+ WK + A ++ N
Sbjct: 314 SDAMAAKWSVPVIVENKPGAGTLIGTDTVAKSAPDGHTIGVVITAHVINPAVRAQMPFDTVRDLRGLTQLAEAHMVVVANPSFPADDIPGLVKAARTQNE-PLAYATPGPATATHMAAELLQKMADIKMLHVPYNGSANALTDVLANRVPLMFDVWHSVQQHVREKTIKVLGVTNATRIPNAPQYACIGETYPGYEANSMFGLVVPAKTPDLAVNALSSDLIAFVKSPGFAAKAEAFGMQPVGSTPQDFDRFVVGEIDKWKKIASDANIRLN 584
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A261VI94_9BORD (MFS transporter n=1 Tax=Bordetella genomosp. 2 TaxID=1983456 RepID=A0A261VI94_9BORD) HSP 1 Score: 225 bits (573), Expect = 5.390e-69 Identity = 114/263 (43.35%), Postives = 167/263 (63.50%), Query Frame = 1
Query: 22 WGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
WG PVIV K GAGT++G + VA+A PDG T+GM ISA TINP++R +MPYDT+RD++GV+ LA + +A VA A P V I A+ R+ +L+Y +PG GT H++GELF+ AAG+ ++HVPY+ S A DL+ GQ L F L QS P+VR+ ++K++ + + +R P PT+ ETL G E S G++AP GTP + + + V+QSP V + + GM V S+PA +D + E+ W+ V ++ V+
Sbjct: 59 WGQPVIVENKPGAGTLIGADYVAKAAPDGQTMGMVISAYTINPSVRRSMPYDTLRDLQGVTQLAESKLALVARADAPFDTVPELIELAR-RQPAKLTYASPGAGTSTHLAGELFKHAAGVDIVHVPYKGSSPAQTDLIGGQVDLMFDLLQSALPMVRSGRLKIIALASPQRDPAFPDYPTVGETLDGFEVGSMFGLVAPAGTPTDKLQAIRDAAAQVIQSPKVAQAMTDLGMTPVVSTPAAFDRFLRDEIDKWREVAQQSNVR 320 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14108.1.1 >prot_P-wetherbeei_contig14108.1.1 ID=prot_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPback to top mRNA from alignment at P-wetherbeei_contig14108:3..821+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14108.1.1 ID=mRNA_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig14108:3..821+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14108:3..821+ >mRNA_P-wetherbeei_contig14108.1.1 ID=mRNA_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig14108:3..821+ (Phaeothamnion wetherbeei SAG_119_79)back to top |