mRNA_P-wetherbeei_contig14108.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14108.1.1
Unique NamemRNA_P-wetherbeei_contig14108.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00056FF33A (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xenophilus azovorans TaxID=151755 RepID=UPI00056FF33A)

HSP 1 Score: 249 bits (637), Expect = 1.320e-78
Identity = 129/268 (48.13%), Postives = 171/268 (63.81%), Query Frame = 1
Query:    7 RVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            R++  W  PV+V  +AG G+ +GT  VA+A PDGHT+GM + A  +NPAIR  +PYDTV D+ GVS +  +A A VAH S+PA  V   IA AK   +  LSY TPG+GTL H+SG L  + AGI LLHVPY  S  A AD+L+G+  L F +W  V+  VR+ ++KVLGV  KERL+  P  P IAETL G E +S  G++     P+ +VD+V AD +AVV+      ++R FGME VGSSP  YD  I  E+A W  V+  A ++
Sbjct:   57 RLSDRWQQPVVVDNRAGGGSAIGTNVVAKAAPDGHTIGMVVMAHVVNPAIRNDLPYDTVGDLVGVSQITTSACALVAHPSLPADTVAELIALAKAHPNT-LSYATPGVGTLNHVSGALLNQQAGIDLLHVPYGGSAAAHADVLSGRVPLMFDVWAPVKEYVRSGRLKVLGVTLKERLASDPTYPAIAETLPGFEVVSAFGMVTSSKVPRPIVDRVGADIAAVVKEEAFAAKVRDFGMEPVGSSPQDYDRFIRTEIARWSRVVKAANIQ 323          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI000878A691 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Hydrogenophaga sp. PML113 TaxID=1899350 RepID=UPI000878A691)

HSP 1 Score: 247 bits (631), Expect = 9.690e-78
Identity = 122/269 (45.35%), Postives = 174/269 (64.68%), Query Frame = 1
Query:    4 DRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            +R+++ W  PV++  +AG G+ +GT  VA+A  DGHT+GM + A  +NPAIR+ +PYDT+ D+ GVS +  +A   VAH SVPA++V+  IA +K + +  LSY TPG GTL H+SG L    AG  LLHVPY  S  A AD+L+G+  L F +W  V   VRA ++KVLG+  K+R+   P  PTIAET+ G E +S  G++     P+ V+DK+ AD +AVV+ P    ++R FGME VGSSP +YD  I  E++ W  V+  + +K
Sbjct:   53 ERLSEKWKQPVVIENRAGGGSTIGTNLVAKAPADGHTIGMVVMAHVVNPAIRSDLPYDTLGDLAGVSQITTSACVLVAHPSVPANNVRELIALSKAQPAT-LSYATPGAGTLNHMSGALLNSLAGTDLLHVPYGGSAAAHADVLSGRVPLMFDVWAPVREYVRAGRLKVLGITLKDRMPSDPTYPTIAETVPGFEVVSAFGMVTSSKVPRPVIDKLGADIAAVVKEPTFAAKVRDFGMEPVGSSPQEYDRFIRSEVSRWSRVVRESNIK 320          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI001AD790D3 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Bradyrhizobium neotropicale TaxID=1497615 RepID=UPI001AD790D3)

HSP 1 Score: 236 bits (601), Expect = 3.350e-73
Identity = 120/272 (44.12%), Postives = 170/272 (62.50%), Query Frame = 1
Query:    1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
            SD +   W  PVIV  K GAGT++GT+AVA++ PDGHT+G+ I+A  INPA+RA MP+DTVRD+RG++ LA A M  VA+ S PA D+   +  A+T+    L+Y TPG  T  H++ EL Q+ A IK+LHVPY  S  A+ D+LA +  L F +W SV+  VR + +KVLGV N  R+ + P+   I ET  G E  S  G++ P  TP   V+ +++D  A V+SP    +   FGM+AVGS+P  +D  +  E+  WK +   A ++ N
Sbjct:   53 SDAMAAKWSVPVIVENKPGAGTLIGTDAVAKSAPDGHTIGVVITAHVINPAVRAQMPFDTVRDLRGLTQLAEAHMVVVANPSFPADDIPGLVKAARTQNE-PLAYATPGPATATHMAAELLQKMADIKMLHVPYNGSANALTDVLANRVPLMFDVWHSVQQHVREKTIKVLGVTNATRIPNAPQYACIGETYPGYEANSMFGLVVPAKTPDLAVNALSSDLIAFVKSPGFAAKADAFGMQAVGSTPQDFDRFVVGEIDKWKKIASDANIRLN 323          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A1J5S353_9ZZZZ (Tripartite tricarboxylate transporter family receptor n=1 Tax=mine drainage metagenome TaxID=410659 RepID=A0A1J5S353_9ZZZZ)

HSP 1 Score: 235 bits (599), Expect = 6.320e-73
Identity = 117/270 (43.33%), Postives = 177/270 (65.56%), Query Frame = 1
Query:    1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            S+++   WG PVIVV K GAGT+LGT  VA++ PDG+TLG+ +SA  INP +R  MPYDTV+D+ GVSL A + +  VA+ S P +++   IA AK ++  +L++ T GIGT  H++GE+ +  AGI +LHVPY     A  +++AG+  + F    +  P +++ K+K L V   +R    P +PTIAETL G+ET S +G++ P  TP+ VV+K++AD + V+Q PD+R R+   GM  VG++P Q+DA+I  E+  W  V+  +G +
Sbjct:   51 SEKLGTLWGKPVIVVYKPGAGTMLGTNYVAKSAPDGYTLGVVVSAHVINPTLRTKMPYDTVKDLSGVSLAATSQLVLVANPSFPPNNLAELIALAK-KEPGKLTFATSGIGTAMHLTGEMIKRQAGIDMLHVPYNGGAPAYVEVMAGRVPMLFDTLFAALPYIKSGKLKALAVSGAQRDPIAPNIPTIAETLPGIETRSIIGIVVPHATPRDVVEKISADLAKVLQMPDLRARMSEIGMTPVGTTPEQFDAIIRSEIVKWGKVVKSSGAR 319          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00041C1F26 (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Azohydromonas australica TaxID=364039 RepID=UPI00041C1F26)

HSP 1 Score: 233 bits (594), Expect = 3.930e-72
Identity = 119/272 (43.75%), Postives = 175/272 (64.34%), Query Frame = 1
Query:    1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
            ++R+   WG PV+V  K GAGT+LGT+ VA++ PDG+TLGMAI+A  INPA++  +PYDT +D+ GV+ ++ A     AH S+P S+V   IAYAK     +LSY TPG+GT  H++GE+    AGI ++HVPY+ S  A  D+L G+  L F +  S  P V+  K+KV+ + + +R    P +P +AET+ G   +S +GVIAP G P+ ++++++AD    V+S ++  R+   GME VGSSP  YDAVI  E+  W  V+  A +KP 
Sbjct:   54 AERLQAQWGQPVVVDYKPGAGTMLGTDFVAKSAPDGYTLGMAITAHMINPALQPKLPYDTTKDLVGVAQVSQAHFGLFAHPSLPVSNVSELIAYAKKNPG-KLSYATPGMGTGTHLAGEMLNHMAGIDMVHVPYKGSAAAQQDVLGGRVPLLFDVLFSSMPFVKDGKLKVIALSSPKRALASPDIPLVAETVPGFSAMSFIGVIAPAGVPRPLLNQISADIGKAVRSTELSGRLVELGMEPVGSSPEAYDAVIRSEIDKWSRVVKAANIKPE 324          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: UPI00131CA44E (tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131CA44E)

HSP 1 Score: 230 bits (586), Expect = 5.760e-71
Identity = 116/268 (43.28%), Postives = 175/268 (65.30%), Query Frame = 1
Query:    1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAG 804
            + R+  +W  PVIV  K GAGT+LGT+ VA+A+PDG+T GM +SA  INP++R  +PYDT++D   VS +    M   A+ S PA+++   IA AK ++  ++ Y + G GT  H+  E+ +  AGI LLHVPY+    A  D++ GQ  L   ++ S  PL++A K+K + +F+  R +  P +PTI+ET+ GV  +S +G++AP  TP  +V K +AD +AV++SPD  ER+R  G+EAVGS+PAQ+DAVI  ++A W  V+  +G
Sbjct:   51 AQRLGAAWKQPVIVDNKPGAGTVLGTDYVAKAQPDGYTFGMVVSAHAINPSLRPNLPYDTLKDFAAVSEIGVQHMVIAANPSFPANNLAELIALAK-KEPGQIGYASSGSGTALHLGMEMLKTQAGIDLLHVPYKGGAPAQQDVVGGQVPLLVDIYHSSAPLIQAGKLKAIALFSPTRPASIPNIPTISETVPGVSALSVIGIVAPAATPPAIVAKASADMAAVIRSPDFVERLRGMGVEAVGSTPAQFDAVIRADIARWAPVVKSSG 317          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A556AFE4_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Verticiella sediminum TaxID=1247510 RepID=A0A556AFE4_9BURK)

HSP 1 Score: 228 bits (581), Expect = 3.070e-70
Identity = 114/265 (43.02%), Postives = 169/265 (63.77%), Query Frame = 1
Query:   16 KSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            ++W  PV+V  K GAGT++G   VA+A  DGHT G+ ISA TINPAIR+ MPYDT+R++ G++ +A A MA VA A  P  DV   + YA+  +  +L+Y TPG GT  H++GE+F+ AAG +++HVPY  S  A+ DL+ G+  L F +  SV P V+A K+K+L V    R  + P  PTIAETL G E  S +G++AP  TP+  +  +  D + V+  P+VR ++   G+  VGSSPA+++  I +++  W  V   +G++
Sbjct:   54 RTWQQPVVVENKPGAGTMIGAATVAKAPADGHTFGIVISAYTINPAIRSKMPYDTLRELTGITQVARANMALVAPADAPFDDVPGLVRYAQAHQG-QLTYATPGPGTATHLAGEMFKRAAGAEIVHVPYNGSGPALTDLIGGRVDLMFDIVHSVRPHVQAGKLKLLAVTAGARDPEMPDTPTIAETLPGFEIYSTIGLVAPAATPEATIATLQRDVAGVLAQPEVRSKLAELGVTPVGSSPAEWNDFIRQDIQRWTEVARASGIR 317          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A4Z0BF27_9BURK (Tripartite tricarboxylate transporter substrate binding protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0BF27_9BURK)

HSP 1 Score: 227 bits (578), Expect = 1.140e-69
Identity = 121/264 (45.83%), Postives = 167/264 (63.26%), Query Frame = 1
Query:   19 SWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            SW  PV++  K G GT LGT AVA+A  DG+TLGMAISALTINP++ A +PYDT RDI GVS +A A     AH S+P + +   I YAK     +LSY TPG GT  H++GE+    A +KL+HVPY+ S  A  D++ G+  L F +  S  P V+  ++KVL + + +R    P +P IAE++ G   +S +GVIAP G P  ++ K++AD    V+SP+V  R+   GME VGS+  QY+A+IA E+  W  V+  AG+K
Sbjct:   64 SWKQPVVLDYKPGGGTTLGTNAVAKAPADGYTLGMAISALTINPSLVANLPYDTRRDIVGVSQVAQAHFGLFAHPSLPVNSMPELIKYAKDNPG-KLSYATPGAGTGTHLAGEMLGHMADLKLVHVPYKGSAPAQQDVIGGRVPLLFDVLFSSMPFVKDNRLKVLALSSPQRAVSSPDIPLIAESVPGFSAMSLIGVIAPAGLPPELLRKISADIGQAVRSPEVTSRMAQLGMEPVGSTSDQYNALIASEIDKWARVIKTAGIK 326          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A4V2EAP0_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobium sp. Leo121 TaxID=1571195 RepID=A0A4V2EAP0_9BRAD)

HSP 1 Score: 233 bits (594), Expect = 3.170e-69
Identity = 118/272 (43.38%), Postives = 168/272 (61.76%), Query Frame = 1
Query:    1 SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVKPN 816
            SD +   W  PVIV  K GAGT++GT+ VA++ PDGHT+G+ I+A  INPA+RA MP+DTVRD+RG++ LA A M  VA+ S PA D+   +  A+T+    L+Y TPG  T  H++ EL Q+ A IK+LHVPY  S  A+ D+LA +  L F +W SV+  VR + +KVLGV N  R+ + P+   I ET  G E  S  G++ P  TP   V+ +++D  A V+SP    +   FGM+ VGS+P  +D  +  E+  WK +   A ++ N
Sbjct:  314 SDAMAAKWSVPVIVENKPGAGTLIGTDTVAKSAPDGHTIGVVITAHVINPAVRAQMPFDTVRDLRGLTQLAEAHMVVVANPSFPADDIPGLVKAARTQNE-PLAYATPGPATATHMAAELLQKMADIKMLHVPYNGSANALTDVLANRVPLMFDVWHSVQQHVREKTIKVLGVTNATRIPNAPQYACIGETYPGYEANSMFGLVVPAKTPDLAVNALSSDLIAFVKSPGFAAKAEAFGMQPVGSTPQDFDRFVVGEIDKWKKIASDANIRLN 584          
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Match: A0A261VI94_9BORD (MFS transporter n=1 Tax=Bordetella genomosp. 2 TaxID=1983456 RepID=A0A261VI94_9BORD)

HSP 1 Score: 225 bits (573), Expect = 5.390e-69
Identity = 114/263 (43.35%), Postives = 167/263 (63.50%), Query Frame = 1
Query:   22 WGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINPAIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKSVELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQLFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISRLGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYDAVIAKELADWKSVLGRAGVK 810
            WG PVIV  K GAGT++G + VA+A PDG T+GM ISA TINP++R +MPYDT+RD++GV+ LA + +A VA A  P   V   I  A+ R+  +L+Y +PG GT  H++GELF+ AAG+ ++HVPY+ S  A  DL+ GQ  L F L QS  P+VR+ ++K++ + + +R    P  PT+ ETL G E  S  G++AP GTP   +  +    + V+QSP V + +   GM  V S+PA +D  +  E+  W+ V  ++ V+
Sbjct:   59 WGQPVIVENKPGAGTLIGADYVAKAAPDGQTMGMVISAYTINPSVRRSMPYDTLRDLQGVTQLAESKLALVARADAPFDTVPELIELAR-RQPAKLTYASPGAGTSTHLAGELFKHAAGVDIVHVPYKGSSPAQTDLIGGQVDLMFDLLQSALPMVRSGRLKIIALASPQRDPAFPDYPTVGETLDGFEVGSMFGLVAPAGTPTDKLQAIRDAAAQVIQSPKVAQAMTDLGMTPVVSTPAAFDRFLRDEIDKWREVAQQSNVR 320          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14108.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00056FF33A1.320e-7848.13tripartite tricarboxylate transporter substrate bi... [more]
UPI000878A6919.690e-7845.35tripartite tricarboxylate transporter substrate bi... [more]
UPI001AD790D33.350e-7344.12tripartite tricarboxylate transporter substrate bi... [more]
A0A1J5S353_9ZZZZ6.320e-7343.33Tripartite tricarboxylate transporter family recep... [more]
UPI00041C1F263.930e-7243.75tripartite tricarboxylate transporter substrate bi... [more]
UPI00131CA44E5.760e-7143.28tripartite tricarboxylate transporter substrate bi... [more]
A0A556AFE4_9BURK3.070e-7043.02Tripartite tricarboxylate transporter substrate bi... [more]
A0A4Z0BF27_9BURK1.140e-6945.83Tripartite tricarboxylate transporter substrate bi... [more]
A0A4V2EAP0_9BRAD3.170e-6943.38Uncharacterized protein n=2 Tax=Bradyrhizobium sp.... [more]
A0A261VI94_9BORD5.390e-6943.35MFS transporter n=1 Tax=Bordetella genomosp. 2 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14108contigP-wetherbeei_contig14108:3..821 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123504.JQKD01000007_gene3420
PFAMsTctC
Model size819
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.52e-79
EggNOG OGsCOG3181@1|root,COG3181@2|Bacteria,1NTMU@1224|Proteobacteria,2W1QZ@28216|Betaproteobacteria,4AGAF@80864|Comamonadaceae
DescriptionTripartite tricarboxylate transporter family receptor
Cds size819
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.4190285-CDS-P-wetherbeei_contig14108:2..8211683186009.4190285-CDS-P-wetherbeei_contig14108:2..821Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14108 3..821 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14108.1.1prot_P-wetherbeei_contig14108.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14108 3..821 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14108.1.1

>prot_P-wetherbeei_contig14108.1.1 ID=prot_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=273bp
SDRVTKSWGHPVIVVTKAGAGTILGTEAVARAKPDGHTLGMAISALTINP
AIRATMPYDTVRDIRGVSLLANAAMAAVAHASVPASDVKSFIAYAKTRKS
VELSYLTPGIGTLGHISGELFQEAAGIKLLHVPYQESPRAVADLLAGQGQ
LFFGLWQSVEPLVRAEKVKVLGVFNKERLSDHPKVPTIAETLAGVETISR
LGVIAPRGTPQGVVDKVAADFSAVVQSPDVRERIRPFGMEAVGSSPAQYD
AVIAKELADWKSVLGRAGVKPN*
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mRNA from alignment at P-wetherbeei_contig14108:3..821+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14108.1.1 ID=mRNA_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig14108:3..821+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGACCGGGTAACGAAGAGCTGGGGACATCCCGTCATCGTGGTGACGAA GGCTGGAGCGGGGACAATTCTTGGAACGGAAGCCGTTGCGCGGGCGAAGC CCGACGGACATACCCTCGGCATGGCGATCTCGGCACTGACGATCAATCCG GCCATCCGTGCGACGATGCCCTACGATACCGTGCGCGACATTCGCGGCGT GTCGCTCCTGGCCAACGCCGCGATGGCGGCGGTCGCCCATGCATCCGTGC CTGCCAGCGACGTCAAATCGTTCATCGCCTATGCCAAGACCCGTAAGAGC GTGGAGCTGAGCTATCTGACGCCGGGGATCGGTACGCTGGGGCACATTTC CGGCGAGTTGTTCCAGGAGGCTGCAGGCATCAAGTTGCTGCACGTGCCCT ATCAGGAGAGCCCGCGCGCGGTCGCCGACCTGCTGGCCGGGCAAGGGCAA TTGTTCTTCGGCTTGTGGCAATCGGTGGAACCGCTGGTCCGCGCCGAAAA GGTCAAGGTTCTGGGTGTCTTCAACAAGGAGCGTCTCAGCGATCACCCGA AGGTTCCGACGATCGCGGAAACGCTGGCGGGCGTGGAGACGATTTCGCGC CTTGGCGTCATTGCACCCAGGGGAACACCGCAAGGCGTGGTCGACAAGGT CGCGGCCGACTTCAGCGCCGTCGTACAAAGCCCCGATGTGCGGGAACGAA TCCGGCCGTTCGGGATGGAAGCTGTCGGTTCGTCCCCGGCGCAATACGAT GCCGTGATCGCGAAAGAACTGGCCGATTGGAAGTCAGTGCTCGGGCGCGC TGGTGTAAAGCCGAACTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14108:3..821+

>mRNA_P-wetherbeei_contig14108.1.1 ID=mRNA_P-wetherbeei_contig14108.1.1|Name=mRNA_P-wetherbeei_contig14108.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=819bp|location=Sequence derived from alignment at P-wetherbeei_contig14108:3..821+ (Phaeothamnion wetherbeei SAG_119_79)
TCCGACCGGGTAACGAAGAGCTGGGGACATCCCGTCATCGTGGTGACGAA
GGCTGGAGCGGGGACAATTCTTGGAACGGAAGCCGTTGCGCGGGCGAAGC
CCGACGGACATACCCTCGGCATGGCGATCTCGGCACTGACGATCAATCCG
GCCATCCGTGCGACGATGCCCTACGATACCGTGCGCGACATTCGCGGCGT
GTCGCTCCTGGCCAACGCCGCGATGGCGGCGGTCGCCCATGCATCCGTGC
CTGCCAGCGACGTCAAATCGTTCATCGCCTATGCCAAGACCCGTAAGAGC
GTGGAGCTGAGCTATCTGACGCCGGGGATCGGTACGCTGGGGCACATTTC
CGGCGAGTTGTTCCAGGAGGCTGCAGGCATCAAGTTGCTGCACGTGCCCT
ATCAGGAGAGCCCGCGCGCGGTCGCCGACCTGCTGGCCGGGCAAGGGCAA
TTGTTCTTCGGCTTGTGGCAATCGGTGGAACCGCTGGTCCGCGCCGAAAA
GGTCAAGGTTCTGGGTGTCTTCAACAAGGAGCGTCTCAGCGATCACCCGA
AGGTTCCGACGATCGCGGAAACGCTGGCGGGCGTGGAGACGATTTCGCGC
CTTGGCGTCATTGCACCCAGGGGAACACCGCAAGGCGTGGTCGACAAGGT
CGCGGCCGACTTCAGCGCCGTCGTACAAAGCCCCGATGTGCGGGAACGAA
TCCGGCCGTTCGGGATGGAAGCTGTCGGTTCGTCCCCGGCGCAATACGAT
GCCGTGATCGCGAAAGAACTGGCCGATTGGAAGTCAGTGCTCGGGCGCGC
TGGTGTAAAGCCGAACTGA
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