mRNA_P-wetherbeei_contig14107.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14107.2.1
Unique NamemRNA_P-wetherbeei_contig14107.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A7X9Q1X0_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A7X9Q1X0_9ACTN)

HSP 1 Score: 413 bits (1061), Expect = 2.340e-144
Identity = 211/250 (84.40%), Postives = 226/250 (90.40%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG+NFV LRDAGDPVELAAKYD DGADELVFLDITASSDGRDTMVDVV RTAEQVFIPFTVGGGIR V+DAR MLRAGADKVSVNTAAV RP +I++IA EFG+QCCVCAIDAKR  DGSG+EV+LHGGRTPTGIDA+ WA +AT LGAGEILLTSMDRDGTKEGFDLELT  I+DAV VPVIASGGVGTL HL EG+  GHATGVLAASIFHFG+HTI +AKA +AAAGV VR
Sbjct:    3 VARVIPCLDVTNGRVVKGVNFVGLRDAGDPVELAAKYDLDGADELVFLDITASSDGRDTMVDVVYRTAEQVFIPFTVGGGIRTVDDARTMLRAGADKVSVNTAAVHRPALISDIAAEFGAQCCVCAIDAKRMADGSGYEVYLHGGRTPTGIDALRWAEQATALGAGEILLTSMDRDGTKEGFDLELTRLIADAVRVPVIASGGVGTLQHLAEGIVEGHATGVLAASIFHFGEHTIAQAKAAMAAAGVQVR 252          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A539E2K8_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539E2K8_9ACTN)

HSP 1 Score: 402 bits (1034), Expect = 3.250e-140
Identity = 207/250 (82.80%), Postives = 222/250 (88.80%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVI CLDVT+GRVVKG+NFVDLRDAGDPVELA +YDR+G DELVFLDITASSDGRDTMVDVV RTAEQVFIPFTVGGGIR+V+DAR MLRAGADKVSVNTAAVQRP +IAEIA EFG+QC VCAIDAKRR DG GFEV LHGGRTPTG+DAVEWA +A   GAGEILLTSMDRDGTK+GFD+ELT  IS  VGVPVIASGGVGTLDHL  G+T G ATGVLAASIFHFG+HTI EAKA + AAGV VR
Sbjct:    3 VARVIACLDVTDGRVVKGVNFVDLRDAGDPVELAQRYDREGIDELVFLDITASSDGRDTMVDVVYRTAEQVFIPFTVGGGIRSVDDARTMLRAGADKVSVNTAAVQRPKLIAEIAAEFGAQCVVCAIDAKRRADGMGFEVHLHGGRTPTGLDAVEWAEKAEAAGAGEILLTSMDRDGTKDGFDIELTRAISSVVGVPVIASGGVGTLDHLARGITEGGATGVLAASIFHFGEHTIAEAKAAMTAAGVIVR 252          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A6I3EUK9_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=root TaxID=1 RepID=A0A6I3EUK9_9ACTN)

HSP 1 Score: 402 bits (1033), Expect = 4.960e-140
Identity = 210/254 (82.68%), Postives = 225/254 (88.58%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGS----GFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG+NFVDLRDAGDPVELA +YD +GADELVFLDITASSDGR+TMVDVV RTAEQVFIPFTVGGGIR+  DAR MLRAGADKVSVNTAAVQRP +I EIA EFG+QCCVCAIDAKR + GS    GFEV+LHGGRT TGIDAV WA  A  LGAGEILLTSMDRDGTKEGFDL LT  ++DAVGVPVIASGGVGTL+HLV+GVT G ATGVLAASIFHFGQHTI EAKAV+AAAG+ VR
Sbjct:    3 VARVIPCLDVTNGRVVKGVNFVDLRDAGDPVELAKRYDAEGADELVFLDITASSDGRETMVDVVYRTAEQVFIPFTVGGGIRSAGDARTMLRAGADKVSVNTAAVQRPGLIREIAAEFGAQCCVCAIDAKRTMPGSDIASGFEVYLHGGRTATGIDAVWWATEAARLGAGEILLTSMDRDGTKEGFDLPLTRRVADAVGVPVIASGGVGTLEHLVDGVTEGRATGVLAASIFHFGQHTIAEAKAVMAAAGITVR 256          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A7K1B964_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=root TaxID=1 RepID=A0A7K1B964_9ACTN)

HSP 1 Score: 394 bits (1012), Expect = 9.680e-137
Identity = 208/258 (80.62%), Postives = 224/258 (86.82%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGS--------GFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVT+GRVVKG+NFVDLRDAGDPVE+A  YDR+GADELVFLDITASSD R TMV+VVSRTAEQVFIPFTVGGGIR+V DAR MLRAGADKVSVNTAAVQRP++I EIA EFGSQC VCAIDAKRR  GS        GFEVFLHGGRTPTGIDA+ WA +AT LGAGEILLTSMDRDGTKEGFDL LT  ++DAVGVPVIASGGVGTL HL EGV  G ATGVLAASIFHFG++ IGEAKA +AAAG+ VR
Sbjct:    3 VSRVIPCLDVTDGRVVKGVNFVDLRDAGDPVEMAEFYDREGADELVFLDITASSDNRRTMVEVVSRTAEQVFIPFTVGGGIRSVADARTMLRAGADKVSVNTAAVQRPELIREIAAEFGSQCVVCAIDAKRRAPGSDLGPGSSSGFEVFLHGGRTPTGIDAIAWAEQATALGAGEILLTSMDRDGTKEGFDLGLTRAVTDAVGVPVIASGGVGTLAHLAEGVLEGGATGVLAASIFHFGEYRIGEAKAAMAAAGITVR 260          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A4P5RXM1_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=6 Tax=root TaxID=1 RepID=A0A4P5RXM1_9ACTN)

HSP 1 Score: 393 bits (1010), Expect = 1.470e-136
Identity = 202/251 (80.48%), Postives = 223/251 (88.84%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGS-GFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG NFV+LRDAGDPVELAA+YD +GADELVFLDITASSDGR TMVDV+SRTAEQVFIPFTVGGGIR+VEDARRMLRAGADKVSVNT+AV+ P +IAEIA+EFGSQC VCA+DAK R DGS G+EVFLHGGRTPTGID VEW  RA  LGAGEILLTSMDRDGTKEGFDLE+T  +SDAVGVPVIASGGVGTL+HLV+G+ IG A  VLAASIFHFG+ T+ +AK  +  AG+ VR
Sbjct:    3 VARVIPCLDVTNGRVVKGTNFVNLRDAGDPVELAAQYDAEGADELVFLDITASSDGRATMVDVISRTAEQVFIPFTVGGGIRSVEDARRMLRAGADKVSVNTSAVENPQLIAEIASEFGSQCVVCAVDAKSRSDGSAGYEVFLHGGRTPTGIDVVEWVTRACALGAGEILLTSMDRDGTKEGFDLEITRRVSDAVGVPVIASGGVGTLEHLVDGIVIGGADAVLAASIFHFGEFTVAQAKQCMIEAGIIVR 253          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A524B0C1_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiales bacterium mtb01 TaxID=1967499 RepID=A0A524B0C1_9ACTN)

HSP 1 Score: 391 bits (1004), Expect = 1.120e-135
Identity = 204/250 (81.60%), Postives = 221/250 (88.40%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVT GRVVKG NFVDLRDAGDPVELAA+YD +GADELVFLDITASSDGRDTM+DVV RTAEQVFIPFTVGGGIR+V+DARRMLRAGADKVSVNT+AVQ P +I+EIA EFG+QC VCAIDAKRR DGS FEVFLHGGRTPT IDAVEWA RA  LGAGEILLTSMDRDGTKEGFDL LT  +S+AVGVPVIASGGVG L HLV+GV  G A  VLAASIFHFG+ T+ EAKA ++AAG+ VR
Sbjct:    3 VARVIPCLDVTAGRVVKGTNFVDLRDAGDPVELAARYDTEGADELVFLDITASSDGRDTMIDVVRRTAEQVFIPFTVGGGIRSVDDARRMLRAGADKVSVNTSAVQNPQLISEIAAEFGAQCVVCAIDAKRRADGS-FEVFLHGGRTPTDIDAVEWAGRAAGLGAGEILLTSMDRDGTKEGFDLTLTRRVSEAVGVPVIASGGVGNLQHLVDGVARGGADAVLAASIFHFGEFTVAEAKAAMSAAGIVVR 251          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A7K1C6M9_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=root TaxID=1 RepID=A0A7K1C6M9_9ACTN)

HSP 1 Score: 390 bits (1002), Expect = 2.430e-135
Identity = 203/251 (80.88%), Postives = 222/251 (88.45%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDG-SGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG NFVDLRDAGDPVELAA+YD +GADELVFLDITASSDGR+TMVD+VSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNT+AVQ P+++  IA+EFGSQC VCAIDAKRR D  S FEV+LHGGRTPTG+D VEWA RA +LGAGEILLTSMDRDGTKEGFDL+LT  +SDAVGVPVIASGGVG+  H+VEGVT+G A  VLAASIFHF + TI E KA +  AGV VR
Sbjct:    3 VARVIPCLDVTNGRVVKGTNFVDLRDAGDPVELAARYDAEGADELVFLDITASSDGRETMVDMVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTSAVQNPELVTAIASEFGSQCVVCAIDAKRRPDDPSRFEVYLHGGRTPTGLDVVEWAARAASLGAGEILLTSMDRDGTKEGFDLDLTRRVSDAVGVPVIASGGVGSSRHMVEGVTLGGADAVLAASIFHFREFTIAETKAAMTEAGVVVR 253          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A3C2B6F3_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B6F3_9ACTN)

HSP 1 Score: 389 bits (999), Expect = 6.470e-135
Identity = 203/251 (80.88%), Postives = 218/251 (86.85%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVD-GSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDV +GRVVKG+NFV LRDAGDPVELA +YD +GADELVFLDITASSDGRDT V +V RTA+QVFIPFTVGGGIR+  DAR MLRAGADKVSVNTAAVQRP++I EIA EFG+QCCVCAIDAKR     SGFEVFLHGGRTPTGIDAVEWAV A   GAGEILLTSMDRDGT+EGFDL LT  I+D+VGVPVIASGGVGTL HL EGV  GHATGVLAASIFHFG+HTI EAK V+A AGV VR
Sbjct:    3 VARVIPCLDVKDGRVVKGVNFVGLRDAGDPVELAKRYDLEGADELVFLDITASSDGRDTTVHMVERTADQVFIPFTVGGGIRSASDARTMLRAGADKVSVNTAAVQRPELITEIADEFGAQCCVCAIDAKRNAALASGFEVFLHGGRTPTGIDAVEWAVDAVRRGAGEILLTSMDRDGTREGFDLPLTRAITDSVGVPVIASGGVGTLQHLAEGVLDGHATGVLAASIFHFGEHTIAEAKDVMARAGVTVR 253          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A6I3MTC1_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=2 Tax=root TaxID=1 RepID=A0A6I3MTC1_9ACTN)

HSP 1 Score: 387 bits (994), Expect = 3.740e-134
Identity = 195/250 (78.00%), Postives = 221/250 (88.40%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG+NFVDLRDAGDPVELAA+YD+ GADELVFLDITASSD R+TM+DVV RTA +VFIPFTVGGGIRA+EDAR +LRAGADKVSVNT+AV+RP +I EIA EFG QC VCA+DAKR  DGSG+EVFLHGGRTPTG +A+EW   A   GAGEILLTSMDRDGT+EGFD+ELT  + D+VGVPVIASGGVG+L HLV+GV  GHA+GVLAASIFHFG+HTI EAKA+++A GV VR
Sbjct:    3 VARVIPCLDVTNGRVVKGVNFVDLRDAGDPVELAARYDQQGADELVFLDITASSDNRNTMIDVVERTAAEVFIPFTVGGGIRALEDARGILRAGADKVSVNTSAVERPQLINEIAAEFGVQCVVCAVDAKRTADGSGWEVFLHGGRTPTGKNALEWITEAVQRGAGEILLTSMDRDGTREGFDIELTRAVCDSVGVPVIASGGVGSLQHLVDGVVQGHASGVLAASIFHFGEHTIAEAKALMSAQGVVVR 252          
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Match: A0A7K0ZCD5_9ACTN (Imidazole glycerol phosphate synthase subunit HisF n=8 Tax=root TaxID=1 RepID=A0A7K0ZCD5_9ACTN)

HSP 1 Score: 384 bits (987), Expect = 5.010e-133
Identity = 199/250 (79.60%), Postives = 219/250 (87.60%), Query Frame = 1
Query:    1 VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDITASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSVNTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTGIDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIASGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR 750
            V RVIPCLDVTNGRVVKG+NFVDLRDAGDPVELAA+YD  GADELVFLDITASSDGRDTMVDVVSRTAE+VFIPFTVGGGIR V DARRMLRAGADKVSVNTAAVQRP+VI++IA EFG+QC VCAIDAK   + + + V+LHGGRT T +DAV+WA RA  LGAGEILLTSMDRDGT++GFDL LT  +S AVGVPVIASGGVGTLDHL +GV  G ATGVLAASIFHFG HTI EAK V++A G+ VR
Sbjct:    6 VARVIPCLDVTNGRVVKGVNFVDLRDAGDPVELAARYDAQGADELVFLDITASSDGRDTMVDVVSRTAEEVFIPFTVGGGIREVADARRMLRAGADKVSVNTAAVQRPEVISDIAAEFGAQCVVCAIDAKWDANRNSWIVYLHGGRTATELDAVQWAERAVALGAGEILLTSMDRDGTRDGFDLALTKAVSSAVGVPVIASGGVGTLDHLADGVLDGGATGVLAASIFHFGDHTISEAKDVMSARGIRVR 255          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14107.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X9Q1X0_9ACTN2.340e-14484.40Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A539E2K8_9ACTN3.250e-14082.80Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A6I3EUK9_9ACTN4.960e-14082.68Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7K1B964_9ACTN9.680e-13780.62Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A4P5RXM1_9ACTN1.470e-13680.48Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A524B0C1_9ACTN1.120e-13581.60Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7K1C6M9_9ACTN2.430e-13580.88Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A3C2B6F3_9ACTN6.470e-13580.88Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A6I3MTC1_9ACTN3.740e-13478.00Imidazole glycerol phosphate synthase subunit HisF... [more]
A0A7K0ZCD5_9ACTN5.010e-13379.60Imidazole glycerol phosphate synthase subunit HisF... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14107contigP-wetherbeei_contig14107:790..1548 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1229780.BN381_80370
Preferred namehisF
PFAMsHis_biosynth
Model size759
Max annot lvl201174|Actinobacteria
KEGG rclassRC00010,RC01190,RC01943
KEGG koko:K02500
KEGG ReactionR04558
KEGG Pathwayko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230
KEGG ModuleM00026
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.3e-132
EggNOG OGsCOG0107@1|root,COG0107@2|Bacteria,2GIRP@201174|Actinobacteria,3UWG7@52018|unclassified Actinobacteria (class)
DescriptionIGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit
Cds size759
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.3897529-CDS-P-wetherbeei_contig14107:789..15481683186009.3897529-CDS-P-wetherbeei_contig14107:789..1548Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14107 790..1548 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14107.2.1prot_P-wetherbeei_contig14107.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14107 790..1548 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14107.2.1

>prot_P-wetherbeei_contig14107.2.1 ID=prot_P-wetherbeei_contig14107.2.1|Name=mRNA_P-wetherbeei_contig14107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=253bp
VPRVIPCLDVTNGRVVKGINFVDLRDAGDPVELAAKYDRDGADELVFLDI
TASSDGRDTMVDVVSRTAEQVFIPFTVGGGIRAVEDARRMLRAGADKVSV
NTAAVQRPDVIAEIATEFGSQCCVCAIDAKRRVDGSGFEVFLHGGRTPTG
IDAVEWAVRATTLGAGEILLTSMDRDGTKEGFDLELTATISDAVGVPVIA
SGGVGTLDHLVEGVTIGHATGVLAASIFHFGQHTIGEAKAVLAAAGVPVR
LG*
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mRNA from alignment at P-wetherbeei_contig14107:790..1548-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14107.2.1 ID=mRNA_P-wetherbeei_contig14107.2.1|Name=mRNA_P-wetherbeei_contig14107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig14107:790..1548- (Phaeothamnion wetherbeei SAG_119_79)
GTCCCGCGTGTCATCCCGTGCCTCGACGTCACCAACGGTCGGGTCGTCAA GGGCATCAACTTCGTCGACCTCCGTGACGCCGGCGATCCGGTGGAGCTGG CCGCGAAGTACGACCGCGACGGTGCCGACGAGCTCGTCTTCCTCGACATC ACTGCGTCGTCGGATGGCCGCGACACGATGGTCGACGTCGTCTCGCGCAC CGCCGAGCAGGTGTTCATCCCGTTCACCGTCGGCGGCGGGATCCGCGCCG TCGAGGACGCTCGCCGGATGTTGCGCGCCGGGGCTGACAAGGTCAGCGTC AACACCGCAGCCGTGCAGCGACCGGACGTGATCGCCGAGATCGCCACCGA GTTCGGGTCCCAGTGCTGCGTCTGCGCCATCGACGCCAAGCGGCGGGTGG ACGGCAGCGGCTTCGAGGTCTTCCTGCACGGTGGGCGCACGCCGACCGGC ATCGACGCGGTCGAGTGGGCAGTGCGGGCCACCACGCTCGGAGCGGGCGA GATCCTGCTGACGTCGATGGACCGCGACGGCACGAAGGAGGGGTTCGACC TCGAGCTGACGGCGACGATCAGCGACGCCGTCGGCGTTCCGGTGATCGCC AGCGGCGGGGTGGGAACGTTGGATCACCTCGTCGAGGGCGTCACCATCGG TCACGCCACGGGTGTGCTGGCGGCCAGCATCTTCCACTTCGGTCAGCACA CCATCGGCGAGGCGAAGGCCGTGCTCGCCGCCGCGGGCGTGCCCGTTCGC CTGGGCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14107:790..1548-

>mRNA_P-wetherbeei_contig14107.2.1 ID=mRNA_P-wetherbeei_contig14107.2.1|Name=mRNA_P-wetherbeei_contig14107.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=759bp|location=Sequence derived from alignment at P-wetherbeei_contig14107:790..1548- (Phaeothamnion wetherbeei SAG_119_79)
GTCCCGCGTGTCATCCCGTGCCTCGACGTCACCAACGGTCGGGTCGTCAA
GGGCATCAACTTCGTCGACCTCCGTGACGCCGGCGATCCGGTGGAGCTGG
CCGCGAAGTACGACCGCGACGGTGCCGACGAGCTCGTCTTCCTCGACATC
ACTGCGTCGTCGGATGGCCGCGACACGATGGTCGACGTCGTCTCGCGCAC
CGCCGAGCAGGTGTTCATCCCGTTCACCGTCGGCGGCGGGATCCGCGCCG
TCGAGGACGCTCGCCGGATGTTGCGCGCCGGGGCTGACAAGGTCAGCGTC
AACACCGCAGCCGTGCAGCGACCGGACGTGATCGCCGAGATCGCCACCGA
GTTCGGGTCCCAGTGCTGCGTCTGCGCCATCGACGCCAAGCGGCGGGTGG
ACGGCAGCGGCTTCGAGGTCTTCCTGCACGGTGGGCGCACGCCGACCGGC
ATCGACGCGGTCGAGTGGGCAGTGCGGGCCACCACGCTCGGAGCGGGCGA
GATCCTGCTGACGTCGATGGACCGCGACGGCACGAAGGAGGGGTTCGACC
TCGAGCTGACGGCGACGATCAGCGACGCCGTCGGCGTTCCGGTGATCGCC
AGCGGCGGGGTGGGAACGTTGGATCACCTCGTCGAGGGCGTCACCATCGG
TCACGCCACGGGTGTGCTGGCGGCCAGCATCTTCCACTTCGGTCAGCACA
CCATCGGCGAGGCGAAGGCCGTGCTCGCCGCCGCGGGCGTGCCCGTTCGC
CTGGGCTGA
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