mRNA_P-wetherbeei_contig14106.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14106.1.1
Unique NamemRNA_P-wetherbeei_contig14106.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A6H5JJC7_9PHAE (MHD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JJC7_9PHAE)

HSP 1 Score: 374 bits (961), Expect = 6.880e-127
Identity = 181/227 (79.74%), Postives = 212/227 (93.39%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFRK-VEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKE 678
            MISA LIIN++GEIVISRFYRDDVTR+AADAFR+QVI SKETG+ API +++G +FLYTRH N+YLVAVTRGNVNPAMV E+L+Q +RIFKAYF++  +E+TLR+NMTLI ELMDETMDYGYPQILS+D+LR+YINLG++RS +GDPQE+GQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSS GAVLRNDV+GKV+MKT LSGMPDCKFGLNDK+ M+++
Sbjct:    1 MISAILIINRRGEIVISRFYRDDVTRAAADAFRLQVIASKETGSSAPIMLLDGNTFLYTRHLNLYLVAVTRGNVNPAMVFEFLYQKIRIFKAYFKRDFDEDTLRNNMTLILELMDETMDYGYPQILSIDVLRTYINLGTIRSLDGDPQESGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSNGAVLRNDVSGKVIMKTLLSGMPDCKFGLNDKLIMERD 227
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A835Z9G3_9STRA (Clathrin assembly complex, medium subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G3_9STRA)

HSP 1 Score: 350 bits (898), Expect = 4.750e-117
Identity = 169/221 (76.47%), Postives = 198/221 (89.59%), Query Frame = 1 
Query:   28 QKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYF---RKVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKES 681
            +KGEIVISRFYRDDVTRSAAD F  QVI SKETG+Q P+K+I+G +F+YTRH+N+Y VAVTR NVNPAMV E+L+Q ++I+KAYF   +  EE+ +R NMTLIYEL+DETMDYGYPQI ++D+LRSYINLGS+ + +GDP ETGQLTSQITGAIDWRREGIRHRKNEVYIDV ESVNLLMSSTGAVLRNDVTGKVMM+TFLSGMP+CKFGLNDK+ M+KE+
Sbjct:   23 KKGEIVISRFYRDDVTRSAADQFLKQVIASKETGSQPPVKLIDGNTFMYTRHSNIYFVAVTRCNVNPAMVFEFLYQTIKIYKAYFNTHKTFEEKHVRKNMTLIYELLDETMDYGYPQITAIDVLRSYINLGSISTLDGDPNETGQLTSQITGAIDWRREGIRHRKNEVYIDVHESVNLLMSSTGAVLRNDVTGKVMMRTFLSGMPECKFGLNDKLIMEKEA 243
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7S2RWY7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RWY7_9STRA)

HSP 1 Score: 324 bits (831), Expect = 5.070e-110
Identity = 158/228 (69.30%), Postives = 194/228 (85.09%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYF-RKVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKES 681
            MIS  +++NQKG+I+ISR YRDDV+R+AAD+FR+QVI +KETG QAP+K IE  SFLYTRH N+Y VA+TR NVNPA+V EYLFQ +RI KAY   + +E ++R+NMTLIYELMDETMD+GYPQ  +VD+LR YINLG+VR    D  +T QLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLL+S+TG +LRN+VTG+V M T L+GMP+CKFGLNDK+ ++KE+
Sbjct:    1 MISMIMVLNQKGDIMISRQYRDDVSRAAADSFRLQVIAAKETGAQAPVKRIENCSFLYTRHLNMYFVALTRSNVNPALVFEYLFQKIRILKAYLGEEFDENSMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINLGNVRPQ--DEPDTAQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLLSNTGTILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEKEN 226
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7S4HKQ6_9STRA (Hypothetical protein n=3 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4HKQ6_9STRA)

HSP 1 Score: 327 bits (838), Expect = 8.220e-108
Identity = 162/229 (70.74%), Postives = 195/229 (85.15%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYF-RKVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKESG 684
            MIS  +++NQKG+I+ISR YRDDV+R+AAD+FR+QVI +KETGTQAP+K IE  SFLYTRH N+Y VA+TR NVNPA+V EYLFQ +RI KAY   + +E ++R+NMTLIYELMDETMD+GYPQ  +VD+LR YINLG+VR    D  E  QLTSQITGAIDWRREGIR++KNEVYIDVLESVNLL+SSTG VLRN+VTG+V M T L+GMP+CKFGLNDK+ +DKESG
Sbjct:   41 MISMIMVLNQKGDIMISRQYRDDVSRAAADSFRLQVIAAKETGTQAPVKRIENCSFLYTRHLNMYFVALTRSNVNPALVFEYLFQKIRILKAYLGEEFDENSMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINLGNVRPQ--DEPEPSQLTSQITGAIDWRREGIRYKKNEVYIDVLESVNLLLSSTGNVLRNEVTGQVQMNTKLTGMPECKFGLNDKLVIDKESG 267
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7S2YSX5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSX5_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.600e-106
Identity = 157/227 (69.16%), Postives = 193/227 (85.02%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFRKVEEET-LRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKE 678
            MIS  +++NQKG+I+ISR YRDDV R+AAD+FR+QV+ +KETGT+AP+K IE  SFLYTRH N+Y VA+TR NVNPA+V+EYLFQ++RI KAY  +  +ET +R+NMTLIYELMDETMD+GYPQ  +VD+LR YINLG+ +  E    E  QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+S+TG+VLRN+VTG V M T L+GMP+CKFGLNDK+ +DKE
Sbjct:    1 MISMIMVLNQKGDIMISRQYRDDVGRAAADSFRLQVVAAKETGTEAPVKRIENCSFLYTRHLNMYFVAMTRSNVNPALVIEYLFQLIRILKAYLGEDFDETAMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINLGTAK--EKVETEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSNTGSVLRNEVTGAVQMNTKLTGMPECKFGLNDKLVIDKE 225
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7S2MKC8_9STRA (Hypothetical protein n=4 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S2MKC8_9STRA)

HSP 1 Score: 322 bits (826), Expect = 5.340e-106
Identity = 158/230 (68.70%), Postives = 194/230 (84.35%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFRK-VEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKESGG 687
            MIS  +++NQKG+I+ISR YRDDV+R+AAD+FR+QVI +K+TG QAP+K IE  SFLYTRH N+Y VA+TR NVNPA+V EYLFQ +RI KAY  +  +E ++R+NMTLIYELMDETMD+GYPQ  +VD+LR YINLG++R    D  E  QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+SSTG +LRN+VTG+V M T L+GMP+CKFGLNDK+ ++KES G
Sbjct:   39 MISMIMVLNQKGDIMISRQYRDDVSRAAADSFRLQVIAAKKTGDQAPVKRIENCSFLYTRHVNMYFVALTRSNVNPALVFEYLFQKIRILKAYLGEDFDENSMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINLGNIRPQ--DEPEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEKESSG 266
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7R9WLA9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WLA9_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.030e-105
Identity = 155/227 (68.28%), Postives = 189/227 (83.26%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFR-KVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKE 678
            MIS  +I+N KG+I+ISR YRDDV R+AAD FR+QVI +KETGT+AP+K IE  SFLYTRH N++ VA+TR NVNPA+VLEYLFQ+++I K Y   + +E  +R+NMTLIYELMDETMD+GYPQ  +VD+LR YIN GSV+    D  E  QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+SSTG +LRN+VTG V+M T L+GMP+CKFGLNDK+ ++KE
Sbjct:    1 MISMIMILNHKGDIMISRQYRDDVNRAAADTFRLQVIATKETGTEAPVKRIENCSFLYTRHLNMFFVALTRSNVNPALVLEYLFQLIKILKGYLGDEFDENAMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINFGSVKPE--DEPEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGNILRNEVTGGVLMNTKLTGMPECKFGLNDKLVIEKE 225
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A7S1VT68_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VT68_9STRA)

HSP 1 Score: 321 bits (823), Expect = 1.230e-105
Identity = 156/230 (67.83%), Postives = 193/230 (83.91%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYF-RKVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKESGG 687
            MIS  +I+NQKG+++ISR YRDDV+R+AAD+FR+QVI +KETGTQAP+K IE  SFLYTRH N+Y VA+TR NVNPA+V EYLFQ +RI KAY   + +E ++R+NMTLIYELMDETMD+GYPQ  +VD+LR YINLG  R    D  E  QLTSQITGAIDWRREGI+H++NEVYIDVLESVNLL+SSTG++LRN+VTG+V M T L+GMP+CKFGLNDK+ +++E  G
Sbjct:   32 MISMIMILNQKGDVMISRQYRDDVSRAAADSFRLQVIAAKETGTQAPVKRIENCSFLYTRHLNMYFVALTRANVNPALVFEYLFQKIRILKAYLGEEFDENSMRNNMTLIYELMDETMDFGYPQNCAVDVLRLYINLGQTRPQ--DEPEPSQLTSQITGAIDWRREGIKHKRNEVYIDVLESVNLLLSSTGSILRNEVTGQVQMNTKLTGMPECKFGLNDKLVIEREESG 259
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A1E7EU59_9STRA (Clathrin adaptor, mu subunit n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EU59_9STRA)

HSP 1 Score: 315 bits (806), Expect = 1.660e-103
Identity = 154/227 (67.84%), Postives = 191/227 (84.14%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFR-KVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKE 678
            MIS  +I+NQKG+I+ISR YRDDV+R+ AD+FR+QV+ +K TGT+AP+  IE  SFLYTRH N++ VAVTR NVNPA+V EYL+Q+VRI K+Y   + +E  +R+NMTLIYELMDETMD+GYPQ  +VD+L+ YINLGSV++   D  E  QLTSQITGAIDWRREGIRH+KNEVYIDVLESVNLL+SSTGA+LRN+VTG V M T L+GMP+CKFGLNDK+ ++KE
Sbjct:    1 MISMIMILNQKGDIMISRQYRDDVSRAGADSFRLQVVATKNTGTEAPVVRIENNSFLYTRHLNMFFVAVTRSNVNPALVFEYLYQLVRILKSYLGDEFDENAMRNNMTLIYELMDETMDFGYPQNCAVDVLKLYINLGSVKAQ--DEPEPSQLTSQITGAIDWRREGIRHKKNEVYIDVLESVNLLLSSTGAILRNEVTGAVQMNTKLTGMPECKFGLNDKLVIEKE 225
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BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Match: A0A6V1NZE4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NZE4_HETAK)

HSP 1 Score: 315 bits (806), Expect = 2.190e-103
Identity = 147/227 (64.76%), Postives = 192/227 (84.58%), Query Frame = 1 
Query:    1 MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKVIEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFRKVEEETLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETGQLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGKVMMKTFLSGMPDCKFGLNDKITMDKES 681
            MISA L++NQKG+I+ISRFYRDDV+RS    FR ++I SKE G++API  +  A+F+YTR  NV+ VAVT+ N NPA+VLEYL+Q +RI KAYF+KVEE+++++NMTL+YELMDETMD+GYPQ+L++D+LRS+INLG+V   +    E   LT+QITGAIDWRR G+R+RKNEVYIDVLESVNLLMS+ G VL N+VTG+V+MKT LSGMP+C+FGLNDK+ M+++S
Sbjct:    1 MISAILLVNQKGDILISRFYRDDVSRSTTSMFRQKIIASKEVGSKAPIIYMSKATFIYTRENNVFFVAVTKSNANPALVLEYLYQKIRICKAYFKKVEEDSIKNNMTLLYELMDETMDFGYPQLLAIDVLRSFINLGTVNVLDDQDLEPNALTAQITGAIDWRRPGLRYRKNEVYIDVLESVNLLMSTNGTVLENNVTGQVIMKTALSGMPECRFGLNDKLIMERDS 227
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14106.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JJC7_9PHAE6.880e-12779.74MHD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A835Z9G3_9STRA4.750e-11776.47Clathrin assembly complex, medium subunit n=1 Tax=... [more]
A0A7S2RWY7_9STRA5.070e-11069.30Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A7S4HKQ6_9STRA8.220e-10870.74Hypothetical protein n=3 Tax=Odontella aurita TaxI... [more]
A0A7S2YSX5_9STRA1.600e-10669.16Hypothetical protein (Fragment) n=1 Tax=Amphiprora... [more]
A0A7S2MKC8_9STRA5.340e-10668.70Hypothetical protein n=4 Tax=Bacillariophyta TaxID... [more]
A0A7R9WLA9_9STRA1.030e-10568.28Hypothetical protein (Fragment) n=1 Tax=Craspedost... [more]
A0A7S1VT68_9STRA1.230e-10567.83Hypothetical protein n=1 Tax=Grammatophora oceanic... [more]
A0A1E7EU59_9STRA1.660e-10367.84Clathrin adaptor, mu subunit n=1 Tax=Fragilariopsi... [more]
A0A6V1NZE4_HETAK2.190e-10364.76Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14106contigP-wetherbeei_contig14106:229..1738 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LRL7
Preferred nameAP2M1
PFAMsAdap_comp_sub,Clat_adaptor_s
Model size693
Max annot lvl2759|Eukaryota
KEGG koko:K11826
KEGG Pathwayko04144,ko04721,ko04961,ko05016,map04144,map04721,map04961,map05016
Hectar predicted targeting categoryother localisation
GOsGO:0000323,GO:0002090,GO:0002092,GO:0002376,GO:0002478,GO:0002495,GO:0002504,GO:0002791,GO:0002793,GO:0003674,GO:0005048,GO:0005102,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005773,GO:0005774,GO:0005829,GO:0005886,GO:0005905,GO:0006403,GO:0006807,GO:0006810,GO:0006886,GO:0006897,GO:0006898,GO:0006900,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007267,GO:0008021,GO:0008104,GO:0008150,GO:0008152,GO:0008565,GO:0009056,GO:0009057,GO:0009653,GO:0009893,GO:0009987,GO:0010008,GO:0010171,GO:0010604,GO:0010646,GO:0010647,GO:0010939,GO:0010940,GO:0010941,GO:0010942,GO:0012505,GO:0012506,GO:0015031,GO:0015833,GO:0015931,GO:0016020,GO:0016032,GO:0016043,GO:0016050,GO:0016055,GO:0016185,GO:0016192,GO:0019222,GO:0019538,GO:0019882,GO:0019884,GO:0019886,GO:0019904,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030100,GO:0030117,GO:0030118,GO:0030119,GO:0030120,GO:0030122,GO:0030125,GO:0030128,GO:0030131,GO:0030132,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030141,GO:0030163,GO:0030424,GO:0030659,GO:0030662,GO:0030665,GO:0030666,GO:0030669,GO:0031090,GO:0031201,GO:0031323,GO:0031325,GO:0031410,GO:0031623,GO:0031982,GO:0032501,GO:0032502,GO:0032535,GO:0032799,GO:0032801,GO:0032802,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033218,GO:0033227,GO:0033267,GO:0033365,GO:0034381,GO:0034383,GO:0034613,GO:0035567,GO:0036019,GO:0036020,GO:0036465,GO:0042277,GO:0042886,GO:0042995,GO:0043005,GO:0043112,GO:0043170,GO:0043195,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043679,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044306,GO:0044325,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0045184,GO:0045202,GO:0045334,GO:0045807,GO:0046907,GO:0048002,GO:0048013,GO:0048259,GO:0048260,GO:0048475,GO:0048488,GO:0048489,GO:0048518,GO:0048519,GO:0048522,GO:0048856,GO:0050657,GO:0050658,GO:0050690,GO:0050708,GO:0050714,GO:0050750,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051128,GO:0051130,GO:0051179,GO:0051222,GO:0051223,GO:0051234,GO:0051236,GO:0051239,GO:0051640,GO:0051641,GO:0051648,GO:0051649,GO:0051650,GO:0051656,GO:0051704,GO:0051716,GO:0060071,GO:0060255,GO:0060341,GO:0060627,GO:0061024,GO:0061356,GO:0061357,GO:0061512,GO:0065003,GO:0065007,GO:0065008,GO:0070142,GO:0070201,GO:0070325,GO:0070382,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072583,GO:0090066,GO:0090087,GO:0090175,GO:0097006,GO:0097458,GO:0097479,GO:0097480,GO:0097494,GO:0097499,GO:0097708,GO:0097718,GO:0098588,GO:0098590,GO:0098657,GO:0098693,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099003,GO:0099503,GO:0099504,GO:0120025,GO:0120038,GO:0150034,GO:0198738,GO:1900242,GO:1900244,GO:1901564,GO:1901565,GO:1901575,GO:1903076,GO:1903077,GO:1903421,GO:1903423,GO:1903530,GO:1903532,GO:1903827,GO:1903828,GO:1904375,GO:1904376,GO:1904951,GO:1905114,GO:1905330,GO:1905475,GO:1905476,GO:1990075,GO:2000026,GO:2000027
Exons4
Evalue2.79e-128
EggNOG OGsKOG0938@1|root,KOG0938@2759|Eukaryota
Ec32 ortholog descriptionClathrin assembly complex, medium subunit
Ec32 orthologEc-12_000290.1
Descriptionendocytosis
Cds size693
COG categoryU
BRITEko00000,ko00001,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.2980895-CDS-P-wetherbeei_contig14106:228..2901683186009.2980895-CDS-P-wetherbeei_contig14106:228..290Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14106 229..290 +
1683186009.3105726-CDS-P-wetherbeei_contig14106:449..6451683186009.3105726-CDS-P-wetherbeei_contig14106:449..645Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14106 450..645 +
1683186009.3193774-CDS-P-wetherbeei_contig14106:968..12291683186009.3193774-CDS-P-wetherbeei_contig14106:968..1229Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14106 969..1229 +
1683186009.3281085-CDS-P-wetherbeei_contig14106:1564..17381683186009.3281085-CDS-P-wetherbeei_contig14106:1564..1738Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14106 1565..1738 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14106.1.1prot_P-wetherbeei_contig14106.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14106 229..1738 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14106.1.1

>prot_P-wetherbeei_contig14106.1.1 ID=prot_P-wetherbeei_contig14106.1.1|Name=mRNA_P-wetherbeei_contig14106.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=231bp
MISAFLIINQKGEIVISRFYRDDVTRSAADAFRMQVIKSKETGTQAPIKV
IEGASFLYTRHANVYLVAVTRGNVNPAMVLEYLFQMVRIFKAYFRKVEEE
TLRDNMTLIYELMDETMDYGYPQILSVDILRSYINLGSVRSTEGDPQETG
QLTSQITGAIDWRREGIRHRKNEVYIDVLESVNLLMSSTGAVLRNDVTGK
VMMKTFLSGMPDCKFGLNDKITMDKESGGGG
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mRNA from alignment at P-wetherbeei_contig14106:229..1738+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14106.1.1 ID=mRNA_P-wetherbeei_contig14106.1.1|Name=mRNA_P-wetherbeei_contig14106.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1510bp|location=Sequence derived from alignment at P-wetherbeei_contig14106:229..1738+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTAGCGCCTTCTTGATTATCAACCAAAAAGGAGAAATCGTCATAAG
CAGATTTTACAGGTACGGCCCGCGCAAAGTTTGCACCTTGCAACCGTTGT
GAAGGGTAAAGAATGGGTTCTCACTTTGGACTAGGTTTTTTCGTCTTTGC
ACTCCTCAACTTCCCCCATCCATCCGCCTCCTCGCTCGCTCGATTCAATT
TTGCACGTTTCCTGCGCGCAGGGACGATGTTACGCGGTCGGCGGCGGACG
CCTTTCGGATGCAGGTCATCAAGTCGAAGGAGACGGGGACGCAGGCGCCC
ATCAAGGTAATCGAGGGCGCCTCCTTCCTCTACACGCGCCACGCCAACGT
CTACCTCGTCGCCGTCACCCGCGGCAACGTCAACCCGGCGATGGTCCTCG
AGTACCTCTTTCAGATGGTCAGTGGGGGCACTTTTCTTCTCTTCTTCGTA
TTGTTTGTCTGTTTAGGCCTTTGATCGTTCTTCTCATTTTTGTAGTATCT
TTCCCACAACACAGTCCTCGGTGAAAAAAGAAACACCTTATGCGAACTCC
TGCGCCGTCCAACGAGCCATGATTTTCATTTATGCCATTTTTCTTCCGCC
TCCCGCCTTGTGCACTTCTTAACGCCTTGCCGTTTATGCGTAAAACGGCA
TTCTACCTTCCTACCTCTCGCCAAAACTAAATCACCTTCCACGGCCGCCT
GCCGCCGCTTCCGTTTCCTGCGTCAAAAAACCCAACGCAGGTGCGCATCT
TCAAGGCGTATTTCCGCAAGGTGGAGGAGGAGACGCTGCGCGACAACATG
ACGCTCATTTATGAGCTCATGGACGAGACGATGGACTACGGTTACCCGCA
GATCCTGTCAGTCGACATTCTGCGGTCGTACATTAACCTGGGCAGCGTGC
GGTCGACGGAGGGGGATCCGCAGGAGACGGGCCAGCTGACGTCGCAGATC
ACAGGGGCAATCGACTGGCGGCGGGAGGGCATCCGGCACCGCAAGAACGA
GGTGAGAACCGAGGGAGGGAGGGAGAAAGAAAGAGAGGGAGAAGAGGATG
GGCATGGGTTGTAGTTCACAGAGAAGGAGAGTTTAAAAGGGCTGAGAAAG
TCTGGTTTCCTCTGATGTTCAGATTTGTTAGGTTGGTGCCTCGAAAGAAT
ATATGTCCTTGCTGCCTCTACCTGCTGCACCTGGCTCCTCTGATGCAGCA
GGGATATTTTTTGTGCCACCTCCATTTAGGAGTGCATTCCCCCCCACAAG
AAGCGTTGCGTCCTGCTTCCGAGCGGCCTTCATTTGGGCTGATTGCATTC
TACTCGCTCTCCCGTTCCCTCCGTCTGCCAACCCAGGTGTACATCGACGT
GCTCGAGTCGGTGAACCTGCTCATGTCTTCGACGGGCGCGGTCCTCCGCA
ACGACGTGACGGGCAAGGTCATGATGAAGACGTTCCTCTCGGGCATGCCC
GACTGCAAGTTCGGCCTCAATGACAAGATCACCATGGACAAAGAGAGCGG
CGGAGGCGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14106:229..1738+

>mRNA_P-wetherbeei_contig14106.1.1 ID=mRNA_P-wetherbeei_contig14106.1.1|Name=mRNA_P-wetherbeei_contig14106.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=693bp|location=Sequence derived from alignment at P-wetherbeei_contig14106:229..1738+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTAGCGCCTTCTTGATTATCAACCAAAAAGGAGAAATCGTCATAAG
CAGATTTTACAGGGACGATGTTACGCGGTCGGCGGCGGACGCCTTTCGGA
TGCAGGTCATCAAGTCGAAGGAGACGGGGACGCAGGCGCCCATCAAGGTA
ATCGAGGGCGCCTCCTTCCTCTACACGCGCCACGCCAACGTCTACCTCGT
CGCCGTCACCCGCGGCAACGTCAACCCGGCGATGGTCCTCGAGTACCTCT
TTCAGATGGTGCGCATCTTCAAGGCGTATTTCCGCAAGGTGGAGGAGGAG
ACGCTGCGCGACAACATGACGCTCATTTATGAGCTCATGGACGAGACGAT
GGACTACGGTTACCCGCAGATCCTGTCAGTCGACATTCTGCGGTCGTACA
TTAACCTGGGCAGCGTGCGGTCGACGGAGGGGGATCCGCAGGAGACGGGC
CAGCTGACGTCGCAGATCACAGGGGCAATCGACTGGCGGCGGGAGGGCAT
CCGGCACCGCAAGAACGAGGTGTACATCGACGTGCTCGAGTCGGTGAACC
TGCTCATGTCTTCGACGGGCGCGGTCCTCCGCAACGACGTGACGGGCAAG
GTCATGATGAAGACGTTCCTCTCGGGCATGCCCGACTGCAAGTTCGGCCT
CAATGACAAGATCACCATGGACAAAGAGAGCGGCGGAGGCGGT
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