mRNA_P-wetherbeei_contig1410.6.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1410.6.1
Unique NamemRNA_P-wetherbeei_contig1410.6.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A836CL87_9STRA (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL87_9STRA)

HSP 1 Score: 173 bits (438), Expect = 3.050e-45
Identity = 119/284 (41.90%), Postives = 147/284 (51.76%), Query Frame = 1
Query:  328 YQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAA--------PLYVHSTVMAADRGL--AAGGDGLG------------DGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLALELRLRAALCACFQDGFVALAAYRRAV 1113
            Y YL+D+IE  RTHW+EIATQFRAIF  DG                                          +A LA+WL RR   F ALLR+ LPL++  AS+++LL+QCM F ASMGRLG DFRGLL P FE  VW+ V  QWR+A+ AF  GL  L  +   S+AAA +        PL V    +   R    AA G+  G            DG   + PPP SL+ +PLLA   N ++  LN LRECAPL+LE  LR  L  C      ALAA+RRA+
Sbjct:  240 YSYLVDVIETCRTHWFEIATQFRAIFGADG------------------------------------------DAALASWLARRVGAFAALLRAALPLVEDAASVRSLLEQCMSFAASMGRLGADFRGLLVPAFEAAVWNGVTAQWRSATRAFQEGLARLAKASAHSSAAARSNAGAAPPLPLCVQKAPLGTPRAGSGAANGERWGGRDTAAAAAAECDGDALLPPPPLSLLNYPLLAHFFNDVVAGLNHLRECAPLSLEAGLREHLALCVDAVCEALAAHRRAL 481          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: D7G7C0_ECTSI (Conserved oligomeric Golgi complex subunit 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C0_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 7.160e-42
Identity = 120/289 (41.52%), Postives = 155/289 (53.63%), Query Frame = 1
Query:  331 QYLMDLIEKNRTHWYEIATQFRAIF-SDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHS-TVMAADRGLAAGGDGL--------------------GDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLALELRLRAALCACFQDGFVALAAYRRAVLRIHSA 1131
            Q LMDLIE  R+ W+E+ATQFRAIF S +G GG                                GS     + +L+ WL+RR   F+  L+ LLPL++ G  L++LL++CMFFGASMGRLG DFRGLL PVFEE V  A A QW  ASA FV  L ++  ++  +    A+ L+V   + +   RG  A G G                     GDG  G+ PPP SLMAFP +ARL+N +L S NQLREC P ++E RL  AL   F D F  LA  ++  LR ++A
Sbjct:  316 QALMDLIESCRSQWFEVATQFRAIFLSVEGSGG----------GSATAARQSAVSSPRVGEGLTTGSGRDSGD-ILSLWLLRRVSAFVEQLKGLLPLVEDGGLLRSLLEECMFFGASMGRLGTDFRGLLVPVFEERVSGAAAAQWATASAEFVVTLRDVA-AIEAAGGNGASLLHVPDRSTITTSRGGPANGHGTSGAGAXXXXXXXXXRAALYGGDG--GIPPPPRSLMAFPPVARLLNLVLTSFNQLRECLPSSVEGRLADALVLSFTDAFRGLAELKKTTLRTNAA 590          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A7S2V501_9STRA (Conserved oligomeric Golgi complex subunit 8 (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V501_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.860e-29
Identity = 94/223 (42.15%), Postives = 117/223 (52.47%), Query Frame = 1
Query:  148 LEMRLQVTYLEARDAWLQDLLDEADKALGASV--AASFLGXXXXXXXXXXXXXXXRAA---GYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEE 801
            LE+RLQV +LEARDAW+Q  LD+ D   G S       L                 AA   G+  YQYL D +EKNRT  +EIATQF+AIF                    +           XXXXXXX S    A+ +LA WL RR   FL LL  +LPL++ GASL NLL+Q MFFGASMGR+G DFRGL+ P+F + +      +W  ASA   A + +
Sbjct:  188 LELRLQVQFLEARDAWVQASLDQLDAQAGFSSDRLRQHLRLVRMRKMHPDQGGGESAAAGLGFQPYQYLTDAVEKNRTLCFEIATQFKAIFCGSADSSTASATAASGGNDGRAKAVDSSPPGHXXXXXXXXSDV--ADRLLAMWLSRRLGRFLNLLELVLPLVEDGASLHNLLEQTMFFGASMGRVGADFRGLIGPIFVKTIERFCKDRWGVASAQLCARIRD 408          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: W7TN52_9STRA (Conserved oligomeric Golgi complex subunit 8 n=5 Tax=Monodopsidaceae TaxID=425072 RepID=W7TN52_9STRA)

HSP 1 Score: 121 bits (304), Expect = 2.130e-26
Identity = 103/320 (32.19%), Postives = 137/320 (42.81%), Query Frame = 1
Query:  148 LEMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEEL-----------RHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGP-------------PPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            LE  LQ  +L+ARDAWLQ  L++     GAS A                    R  G  V   LM +IE NRTHW+EI TQFRAIF DDG    G          + L                 G   +    VL+AWL+RR  +FL  L   L  +  GA L ++++QC+FF ASMGR+G DFR  L PVF + +       W A+     A LE             R    + + +   P+  ++             DG         P             PP+S++AFP LA+  N +L S NQLR+C P +L
Sbjct:  252 LEKELQTEFLDARDAWLQSELEQGRS--GASGA--------------------RGHGVGVAD-LMAMIEANRTHWFEITTQFRAIFLDDGLEASGSSSSTHSSSTSLL----------------RGQDGAGGSKVLSAWLLRRLALFLGELEDKLAHVTEGAVLADVMEQCLFFAASMGRIGGDFRASLGPVFSQAILAMADAHWSASRVELEALLERCAREGTMLRAQPRPHRQSGSGSHPYPMCYYAPGSTGPNQH----DGRDTAHHSAQPDPDTSTSESDFPAPPSSILAFPPLAQFTNLVLVSYNQLRQCTPWSL 528          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A7S2SW00_9STRA (Conserved oligomeric Golgi complex subunit 8 (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW00_9STRA)

HSP 1 Score: 107 bits (268), Expect = 1.110e-21
Identity = 89/303 (29.37%), Postives = 130/303 (42.90%), Query Frame = 1
Query:  148 LEMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYN-VYQYLMDLIEKNRTHWYEIATQFRAIFSD----------DGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECA 1023
            +E++LQ+ YLE R AWL   L+  +      +                      + G N V+QYLM L E++RT W+E+ATQFRAIFSD          +G G   G                                   A  +L++WL+R+T+ FL+ L   L L+  G  L +LLDQ +F G+S+GR+G DFR  +  VF + + +  + Q+  A       L E R + L    AA  PL   +                          P SL+ FP+LA  VN  L +LN +R+C+
Sbjct:  183 MELKLQLDYLEGRTAWLHAELESIELKSIPMIGLLPKETTDQAASSSPEEIASDSGGQNAVFQYLMALFERHRTIWFEVATQFRAIFSDRSAPASEAEEEGSGAAAGPPRPPL-----------------------------ASRMLSSWLMRQTEFFLSDLERSLTLVTDGGMLGDLLDQALFLGSSLGRVGLDFRPQVLEVFGQRLVEVASSQFDRAHLELGRTLAEHRDAFLAGKPAACVPLTAATGXXXXXXXXXXXXXXXXXXXXAPPEAPVSLLGFPVLAVAVNTYLVALNHIRQCS 456          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A4Y7MDH5_9CRUS (Conserved oligomeric Golgi complex subunit 8 n=12 Tax=Daphnia TaxID=6668 RepID=A0A4Y7MDH5_9CRUS)

HSP 1 Score: 107 bits (268), Expect = 1.220e-21
Identity = 79/295 (26.78%), Postives = 131/295 (44.41%), Query Frame = 1
Query:  151 EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            E  +++ +L+ARD+W +  L+E  K                                + YQ+++  +E +R H ++IATQ+RAIF+D+ P                                      +   A+  +W++++   FLA L+S LP + S +SL+++  QCM+FG S GR+G DFR LL P+F +VV+D        + + F   +     +  +S  + A+  Y+ S   +AD+                  PP SL+ F  LA L N L+ + N+LR CAP+ L
Sbjct:  252 EEEIRLKFLQARDSWFKSTLEEIPKE-------------------------------DAYQHILKTVELSRVHLFDIATQYRAIFTDEDP-----------------------------LVLANQDPSTNESAIYYSWIIQKITDFLAALQSDLPKV-SPSSLESVFGQCMYFGLSFGRIGSDFRSLLVPLFSQVVYDRFVHSANKSESQFAEAMASFSLTRTSSLGSNASYSYIQSAPSSADQIQ----------------PPYSLLKFSPLAELCNGLIAAFNELRMCAPIQL 469          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A4Y7MNI0_9CRUS (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A4Y7MNI0_9CRUS)

HSP 1 Score: 107 bits (266), Expect = 1.320e-21
Identity = 79/295 (26.78%), Postives = 131/295 (44.41%), Query Frame = 1
Query:  151 EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            E  +++ +L+ARD+W +  L+E  K                                + YQ+++  +E +R H ++IATQ+RAIF+D+ P                                      +   A+  +W++++   FLA L+S LP + S +SL+++  QCM+FG S GR+G DFR LL P+F +VV+D        + + F   +     +  +S  + A+  Y+ S   +AD+                  PP SL+ F  LA L N L+ + N+LR CAP+ L
Sbjct:   23 EEEIRLKFLQARDSWFKSTLEEIPKE-------------------------------DAYQHILKTVELSRVHLFDIATQYRAIFTDEDP-----------------------------LVLANQDPNTNESAIYYSWIIQKITDFLAALQSDLPKV-SPSSLESVFGQCMYFGLSFGRIGSDFRSLLVPLFSQVVYDRFVHSANKSESQFAEAMASFSLTRTSSLGSNASYSYIQSAPSSADQIQ----------------PPYSLLKFSPLAELCNGLIAAFNELRMCAPIQL 240          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A4Y7N9T0_9CRUS (Conserved oligomeric Golgi complex subunit 8 n=10 Tax=Daphnia TaxID=6668 RepID=A0A4Y7N9T0_9CRUS)

HSP 1 Score: 106 bits (265), Expect = 2.970e-21
Identity = 79/295 (26.78%), Postives = 130/295 (44.07%), Query Frame = 1
Query:  151 EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            E  +++ +L+ARD+W +  L+E  K                                + YQ+++  +E +R H ++IATQ+RAIF+D+ P                                      +   A+  +W++++   FL  L+S LP + S +SL+++  QCM+FG S GR+G DFR LL P+F +VV+D        + A F   +     +  +S  + A+  Y+ S   +AD+                  PP SL+ F  LA L N L+ + N+LR CAP+ L
Sbjct:  259 EEEIRLKFLQARDSWFKSTLEEIPKE-------------------------------DAYQHILKTVELSRVHLFDIATQYRAIFTDEDP-----------------------------LVLANQDPNTNESAIYYSWIIQKITDFLGALQSDLPKV-SPSSLESVFGQCMYFGLSFGRIGSDFRSLLVPLFSQVVYDRFVHSANKSEAQFAEAMASFSLTRTSSLGSNASYSYIQSAPSSADQIQ----------------PPYSLLKFSPLAELCNGLIAAFNELRMCAPIQL 476          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A4Y7M1I6_9CRUS (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Daphnia dolichocephala TaxID=2282166 RepID=A0A4Y7M1I6_9CRUS)

HSP 1 Score: 105 bits (262), Expect = 7.120e-21
Identity = 80/295 (27.12%), Postives = 130/295 (44.07%), Query Frame = 1
Query:  151 EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            E  +++ +L+ARD+W +  LDE  K                                + YQ+++  +E +R H ++IATQ+RAIF+D+ P                                   +  +   A+  +W++++   F+  L+S LP + S +SL+++  QCM+FG S GR+G DFR LL P+F +VV+D        + A F   +     S   S  + A+  Y+ ++   AD+                  PP SLM F  LA L N L+ + N+LR CAP+ L
Sbjct:  222 EEEIRLKFLQARDSWFKSTLDEIPKE-------------------------------DAYQHVLKTVELSRVHLFDIATQYRAIFTDEDP-----------------------------LVIANQNPNTNESAIYYSWIIQKITDFVGALQSDLPKV-SPSSLESVFGQCMYFGLSFGRIGSDFRSLLVPLFSQVVYDRFDHSANKSEAQFAEAMASFSLSRTGSFGSNASYSYIQTSPSPADQVQ----------------PPYSLMKFSPLAELCNGLIAAFNELRMCAPVQL 439          
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Match: A0A4Y7M396_9CRUS (Conserved oligomeric Golgi complex subunit 8 n=1 Tax=Daphnia hispanica TaxID=575233 RepID=A0A4Y7M396_9CRUS)

HSP 1 Score: 104 bits (259), Expect = 1.710e-20
Identity = 79/295 (26.78%), Postives = 128/295 (43.39%), Query Frame = 1
Query:  151 EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGXXXXXXXXXXXXXXXRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGXXXXXXXXXTKLGXXXXXXXXXXXXXXXXGSSCSRAEAVLAAWLVRRTDVFLALLRSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAVAPQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGGDGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLAL 1035
            E  +++ +L+ARD+W +  L+E  K                                + YQ+++  +E +R H ++IATQ+RAIFSD+ P                                      +   A+  +W++++   FL  L+S LP I S +SL+++  QCM+FG S GR+G DFR LL P+F +VV+D        + A F   +     +  +S  +     Y+ +T  +AD+                  PP  L+ F  LA L N L+ + N+LR CAP+ L
Sbjct:  224 EEEIRLKFLQARDSWFKSTLEEIPKE-------------------------------DAYQHIVKTVELSRVHLFDIATQYRAIFSDEDP-----------------------------LVLANQDPNTNESAIYYSWIIQKITDFLGALQSDLPKI-SPSSLESVFGQCMYFGLSFGRIGSDFRSLLVPLFSQVVYDRFVHSANKSEAQFAEAMASFSLTRTSSFGSNTGYSYIQTTPSSADQVQ----------------PPYGLIKFSPLAELCNGLIATFNELRMCAPVQL 441          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1410.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CL87_9STRA3.050e-4541.90Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
D7G7C0_ECTSI7.160e-4241.52Conserved oligomeric Golgi complex subunit 8 n=2 T... [more]
A0A7S2V501_9STRA1.860e-2942.15Conserved oligomeric Golgi complex subunit 8 (Frag... [more]
W7TN52_9STRA2.130e-2632.19Conserved oligomeric Golgi complex subunit 8 n=5 T... [more]
A0A7S2SW00_9STRA1.110e-2129.37Conserved oligomeric Golgi complex subunit 8 (Frag... [more]
A0A4Y7MDH5_9CRUS1.220e-2126.78Conserved oligomeric Golgi complex subunit 8 n=12 ... [more]
A0A4Y7MNI0_9CRUS1.320e-2126.78Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A4Y7N9T0_9CRUS2.970e-2126.78Conserved oligomeric Golgi complex subunit 8 n=10 ... [more]
A0A4Y7M1I6_9CRUS7.120e-2127.12Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]
A0A4Y7M396_9CRUS1.710e-2026.78Conserved oligomeric Golgi complex subunit 8 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1410contigP-wetherbeei_contig1410:5643..7227 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7G7C0
Preferred nameCOG8
PFAMsDor1
Model size1190
Max annot lvl2759|Eukaryota
KEGG koko:K20295
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000139,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006888,GO:0006891,GO:0007275,GO:0007548,GO:0008104,GO:0008150,GO:0008406,GO:0009653,GO:0009887,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0017119,GO:0022414,GO:0030334,GO:0031090,GO:0031984,GO:0032258,GO:0032501,GO:0032502,GO:0032588,GO:0032879,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0035262,GO:0040012,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045137,GO:0045184,GO:0046907,GO:0048193,GO:0048513,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051179,GO:0051234,GO:0051270,GO:0051641,GO:0051649,GO:0061458,GO:0061919,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0072665,GO:0098588,GO:0098791,GO:0099023,GO:2000145
Exons2
Evalue1.17e-42
EggNOG OGsKOG2069@1|root,KOG2069@2759|Eukaryota
Descriptionintra-Golgi vesicle-mediated transport
Cds size1188
COG categoryO
BRITEko00000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186009.1176634-CDS-P-wetherbeei_contig1410:5642..60981683186009.1176634-CDS-P-wetherbeei_contig1410:5642..6098Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1410 5643..6098 -
1683186009.128277-CDS-P-wetherbeei_contig1410:6495..72271683186009.128277-CDS-P-wetherbeei_contig1410:6495..7227Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1410 6496..7227 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1410.6.1prot_P-wetherbeei_contig1410.6.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1410 5643..7227 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1410.6.1

>prot_P-wetherbeei_contig1410.6.1 ID=prot_P-wetherbeei_contig1410.6.1|Name=mRNA_P-wetherbeei_contig1410.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=396bp
DGYGSSGASEELTGAESGSAQAAEAVEVAEAETAAAATEAAAVARQARLL
EMRLQVTYLEARDAWLQDLLDEADKALGASVAASFLGGGGGGSSGGSGGG
GGRAAGYNVYQYLMDLIEKNRTHWYEIATQFRAIFSDDGPGGFGGGYGGY
GAGGTKLGGAGGRGGGPSGGSSGGGSSCSRAEAVLAAWLVRRTDVFLALL
RSLLPLIDSGASLQNLLDQCMFFGASMGRLGFDFRGLLSPVFEEVVWDAV
APQWRAASAAFVAGLEELRHSMLTSAAAAAAPLYVHSTVMAADRGLAAGG
DGLGDGRIGVGPPPASLMAFPLLARLVNALLQSLNQLRECAPLALELRLR
AALCACFQDGFVALAAYRRAVLRIHSATYLTAGAAGSVSSPSAATA
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mRNA from alignment at P-wetherbeei_contig1410:5643..7227-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1410.6.1 ID=mRNA_P-wetherbeei_contig1410.6.1|Name=mRNA_P-wetherbeei_contig1410.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1585bp|location=Sequence derived from alignment at P-wetherbeei_contig1410:5643..7227- (Phaeothamnion wetherbeei SAG_119_79)
GACGGCTACGGCAGCTCTGGCGCTTCAGAGGAGCTGACCGGCGCCGAATC AGGATCGGCGCAGGCAGCGGAAGCGGTAGAAGTGGCGGAGGCGGAGACGG CGGCGGCGGCGACCGAGGCGGCGGCAGTAGCGCGGCAGGCGCGGCTGCTG GAGATGCGGCTGCAGGTGACGTACCTGGAGGCGCGCGACGCGTGGCTACA GGACCTCCTCGACGAAGCCGACAAGGCCCTCGGCGCTAGTGTCGCCGCCA GCTTCCTTGGCGGCGGTGGTGGCGGTTCCAGCGGCGGCTCTGGCGGCGGC GGCGGGAGGGCGGCAGGCTACAACGTCTATCAATACCTGATGGACTTGAT CGAGAAGAACCGGACACACTGGTACGAGATTGCGACGCAGTTCCGTGCCA TCTTCTCCGACGATGGCCCGGGCGGGTTTGGCGGCGGTTATGGCGGTTAC GGTGCCGGCGGGACCAAGCTCGGCGGCGCCGGAGGCCGCGGCGGTGGTCC CAGTGGCGGCAGTTCTGGCGGCGGTTCCAGCTGCAGCAGGGCGGAAGCGG TGCTGGCGGCGTGGCTGGTGCGGCGGACAGACGTTTTCCTCGCGCTGCTG CGGTCGCTATTACCGCTCATCGACAGCGGCGCGTCGCTCCAAAACCTGTT GGACCAGTGCATGTTCTTTGGCGCAAGCATGGGCCGCCTAGGCTTCGATT TCCGCGGCCTCCTGTCCCCCGTCTTCGAGGAGGCGCGTACATATTACATA TTGCCGCCTGCAGTTTTCGCGCTTCAGCCTTGCAAATGCATTACCCTCTC GAAGAAATATGGCTGTAAACCCCTGCCCCTCATATGCGCGCTCTTTGAAG TGTGTTTTGCAGGACGGAATGCAAGATTGGTTGAACGAAGAATGTTCTTT TCATGCCGCTTTATAAGCTGCTGCAGTCTCTGTTGATGTGTGCGTCGTGA AATGAGCTGCTAGCCTAGGAGGGGAGCGAAAAATCTGCCGGGAGACATGA AGCGCATCCCTCCAAACCTAGCTCGCCCCAAGCGCTTCGTTGCTTCTTCC TCCGCGGCCTGCAGCTTCTTTTTCGTTTCCCTCCTTTCTCCGCTTATCCC CTCCGTCCGTCTCGGCTTCTGCATTGCAGGTGGTGTGGGACGCGGTGGCG CCGCAATGGCGGGCGGCCTCGGCGGCGTTCGTCGCAGGGCTCGAGGAGCT GCGCCACAGCATGCTGACGTCCGCCGCCGCCGCTGCCGCGCCGCTCTACG TCCACAGCACCGTCATGGCGGCCGACCGGGGGTTGGCAGCCGGCGGCGAC GGCCTCGGCGACGGCAGGATAGGGGTGGGGCCGCCGCCGGCGTCGCTCAT GGCGTTTCCCTTGCTGGCACGGCTGGTTAACGCGCTCCTGCAGTCGCTCA ACCAGCTGCGAGAGTGCGCGCCGCTCGCGCTGGAGCTGCGGCTTCGTGCG GCCCTCTGCGCTTGCTTCCAGGACGGCTTCGTGGCGCTCGCGGCCTACCG GCGGGCTGTCCTCCGCATTCACTCGGCCACCTACCTCACTGCCGGCGCTG CGGGGTCCGTCTCGTCGCCGTCGGCGGCCACAGCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1410:5643..7227-

>mRNA_P-wetherbeei_contig1410.6.1 ID=mRNA_P-wetherbeei_contig1410.6.1|Name=mRNA_P-wetherbeei_contig1410.6.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1188bp|location=Sequence derived from alignment at P-wetherbeei_contig1410:5643..7227- (Phaeothamnion wetherbeei SAG_119_79)
GACGGCTACGGCAGCTCTGGCGCTTCAGAGGAGCTGACCGGCGCCGAATC
AGGATCGGCGCAGGCAGCGGAAGCGGTAGAAGTGGCGGAGGCGGAGACGG
CGGCGGCGGCGACCGAGGCGGCGGCAGTAGCGCGGCAGGCGCGGCTGCTG
GAGATGCGGCTGCAGGTGACGTACCTGGAGGCGCGCGACGCGTGGCTACA
GGACCTCCTCGACGAAGCCGACAAGGCCCTCGGCGCTAGTGTCGCCGCCA
GCTTCCTTGGCGGCGGTGGTGGCGGTTCCAGCGGCGGCTCTGGCGGCGGC
GGCGGGAGGGCGGCAGGCTACAACGTCTATCAATACCTGATGGACTTGAT
CGAGAAGAACCGGACACACTGGTACGAGATTGCGACGCAGTTCCGTGCCA
TCTTCTCCGACGATGGCCCGGGCGGGTTTGGCGGCGGTTATGGCGGTTAC
GGTGCCGGCGGGACCAAGCTCGGCGGCGCCGGAGGCCGCGGCGGTGGTCC
CAGTGGCGGCAGTTCTGGCGGCGGTTCCAGCTGCAGCAGGGCGGAAGCGG
TGCTGGCGGCGTGGCTGGTGCGGCGGACAGACGTTTTCCTCGCGCTGCTG
CGGTCGCTATTACCGCTCATCGACAGCGGCGCGTCGCTCCAAAACCTGTT
GGACCAGTGCATGTTCTTTGGCGCAAGCATGGGCCGCCTAGGCTTCGATT
TCCGCGGCCTCCTGTCCCCCGTCTTCGAGGAGGTGGTGTGGGACGCGGTG
GCGCCGCAATGGCGGGCGGCCTCGGCGGCGTTCGTCGCAGGGCTCGAGGA
GCTGCGCCACAGCATGCTGACGTCCGCCGCCGCCGCTGCCGCGCCGCTCT
ACGTCCACAGCACCGTCATGGCGGCCGACCGGGGGTTGGCAGCCGGCGGC
GACGGCCTCGGCGACGGCAGGATAGGGGTGGGGCCGCCGCCGGCGTCGCT
CATGGCGTTTCCCTTGCTGGCACGGCTGGTTAACGCGCTCCTGCAGTCGC
TCAACCAGCTGCGAGAGTGCGCGCCGCTCGCGCTGGAGCTGCGGCTTCGT
GCGGCCCTCTGCGCTTGCTTCCAGGACGGCTTCGTGGCGCTCGCGGCCTA
CCGGCGGGCTGTCCTCCGCATTCACTCGGCCACCTACCTCACTGCCGGCG
CTGCGGGGTCCGTCTCGTCGCCGTCGGCGGCCACAGCA
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