mRNA_P-wetherbeei_contig1408.2.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1408.2.2
Unique NamemRNA_P-wetherbeei_contig1408.2.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A7S2PB29_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PB29_9STRA)

HSP 1 Score: 326 bits (836), Expect = 1.600e-96
Identity = 171/386 (44.30%), Postives = 247/386 (63.99%), Query Frame = 1
Query:   88 FDRFILVVILVNSVFLALVDYGHVDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGFGV----YLQ-NSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKLGD-CLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHA--PQDCVWPVDEADERVCSELSGGFYHCPS-------WENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESIADADE 1200
            F+ F+L +I++NS+ +A  DY HVD DYQP  E S RN  + K++  F  +F  E   KI+ YGF +    YL+ N+WN++DF VV  +++    G+P +S+LR  R+LRPLRS+++ PGLR++I A+  SM  L++V+LLL F +  FSI+G  F+ G+LH+R       CR+TPYPV L D C  +   CW  Y+A V + P A+ CL +         +D++W++ S SPW+   PQDC+WP+D  DERVC+    G Y CPS         ++TCGSN+D  GN R ++S  PYG+ RM SG + + L WGY  +DNF  A +T FQV + EGW  +MY+ MDA+    ++V+F++I++FG  IVLNLVLAVITES+   +E
Sbjct:   49 FETFVLAMIVLNSIVMASTDYRHVDQDYQPTAEGSERNEFVEKSEILFNIVFIIECFFKIVTYGFLLDKDSYLRRNNWNKMDFIVVAASVMGMFPGMPNISVLRTIRVLRPLRSISRLPGLRKIIGALIDSMESLMNVILLLVFFLACFSIIGVVFWRGILHSR-------CRLTPYPVVLFDNCRSQSEQCWEMYLAEVISNPSAYRCLEEET-------NDSSWTQ-STSPWYVKGPQDCIWPIDTNDERVCNLGGVGGYACPSILAEDGKMVDRTCGSNYDDFGNARFINSMEPYGYPRMESGVFTEGLNWGYTNYDNFWAAFVTTFQVVSMEGWTDVMYQTMDAWAAAPSIVIFIIIVIFGGHIVLNLVLAVITESMEKLEE 419          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: B8C0W0_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C0W0_THAPS)

HSP 1 Score: 297 bits (761), Expect = 1.860e-86
Identity = 164/387 (42.38%), Postives = 235/387 (60.72%), Query Frame = 1
Query:   70 VARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF----GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKL-GDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDA-AWSRRSDSPWH--APQDCVWPVDEADERVCSELSGGFYHCPSWEN-------KTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESI 1185
            +  S  FD  IL+ I++NS+ +A  DY  VDD+YQP TE S RN+ I K D  FT IFT E ++K+I +GF      YL++ WN LD  +VVT++L  +  VP  S+LR FR+LRPLRS++K P LR++I A   S++ LV+V++LL F++  F++ G +F+ GL H R       CR+TP+PV +  DC      CW ++V + +  P  H CL       P AND+A +WS+ S SPW+    QDC+WP+DE D RVCS    G + C            +TCGSN+D  GN R + S  PYG+ RM    +   L WG+  FDNF  A +T FQ  T EGW  IMY+ ++A+     ++V+ ++I+ G+ I +N+VLAVIT+S+
Sbjct:   10 IVSSPSFDNIILIAIILNSIAIACTDYSVVDDNYQPSTELSVRNSIIEKIDVPFTVIFTVECLLKVIAFGFWKRRNAYLRDGWNVLDLLIVVTSILGLLPHVPNFSVLRSFRVLRPLRSISKLPSLRKIIGAFSKSIQDLVNVMVLLLFILVCFTLFGVTFWRGLFHAR-------CRLTPFPVSMPSDCRATTDTCWNEFVLDAAMYPYKHRCL-------PHANDNAESWSQ-STSPWYFSGRQDCIWPIDETDSRVCSITGRGSHSCIKDVEFMGQTIPRTCGSNYDSFGNPRFIESVEPYGYSRMKDDVFSKDLNWGFTSFDNFSLAFVTTFQSVTLEGWSDIMYRTIEAWLAAPTIMVYAMLIILGAQIAINIVLAVITKSL 381          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A7S1U4W8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U4W8_9STRA)

HSP 1 Score: 280 bits (717), Expect = 3.950e-82
Identity = 175/415 (42.17%), Postives = 235/415 (56.63%), Query Frame = 1
Query:   19 SLFFLKRGNPMRELCLKVARSK---LFDRFILVVILVNSVFLALVDYGHVDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGFG-----VYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKL-GDCLDRQADCWTDYV-----ANVSAAPL-----AHACLL--DAVTGLPTANDDAAWSRRSDSPWHAPQ-DCVWPVDEADERVCSELSG---GFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESIA 1188
            +LF     NP+R  CL++  SK    FD  IL+ I +NS+  A+ DY +VDDD  P    S RNT I  ++  F  ++T E +IKII +GF      VYL++ WN LDF  V+ + L     +P +S +R FR  RPLRSV +FPGL+R++ A+  S+ GLVDVVL     + ++SI+G   F GL H R       CRV P+PV +  DC D   +CW  Y+      N + +       A+ CL   D VT  P  N D  W++ S SPW+    DCVWP D  DERVCS  +    G Y CPS   + CGSN+D  GNRR      PYGF+RM SGTY   L +G   FDN   A+++ FQ  T EGW  IMY+  D  N  +  + FV +I+ GSF++L+LVLAV+ E +A
Sbjct:   31 ALFVFDETNPLRAKCLEIVNSKGTFCFDNIILIFIALNSILTAMADYENVDDDGNPEPNGSARNTIIYVSEFIFLVVYTGEFLIKIIAFGFAWGNDNVYLKDPWNVLDFITVIASYLALDPTLPNLSAIRTFRAFRPLRSVNRFPGLKRLVTALLDSLVGLVDVVLXXXXXLLIYSILGMQLFQGLQHAR-------CRVVPHPVIVPSDCTDVTNECWGQYLDMLTTVNATTSDYNYNHPAYICLTKDDGVT--PEDNFDLDWTKDS-SPWNVGGLDCVWPEDADDERVCSLPNNNLNGDYTCPS--QRWCGSNYDDQGNRRFKEVDYPYGFNRMNSGTYVAGLNFGITNFDNIFSALLSCFQAVTMEGWTDIMYQIQDGVNGPIGSIFFVSLIVIGSFVMLSLVLAVVEEQVA 433          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A7S1G9I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9I4_9STRA)

HSP 1 Score: 253 bits (647), Expect = 3.890e-75
Identity = 155/399 (38.85%), Postives = 227/399 (56.89%), Query Frame = 1
Query:   19 SLFFLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF----GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVK-----LGDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCSELSGGFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESIA 1188
            SL+     NP+R+  + +   K FDRFIL++I+ NS+ LAL DY  V  D   ++  S RN  + +T+ YFT +F +E  +KII  GF    G YL++ WN +DF VV+T +L  + G+P VS  R  R+LRPLRS+   PG+R ++ ++  S+  L++VV LL F+  +F I+G   + GLLH R       CR+TPYP++     +  C D +++     VA+ S     HA                 W+   ++PW  P DC WPVD+ D  VCS   GG + C S  ++ CGSN+D  G  R  ++    G D+    T+   L WGY  FDN   A++T+FQ+ T EGW  +MY+  DA+N VV+ V F+ +ILFGSF +LNL LAVI ++ +
Sbjct:   28 SLYLFSTTNPIRKRIVWLIEWKYFDRFILMLIIANSIVLALTDYSSVLPD-GTLSMSSWRNQVVEETEIYFTTLFAAECSLKIIAMGFFVDIGSYLRDGWNIMDFVVVMTGVLTTVPGMPNVSAFRTVRVLRPLRSLTVVPGMRLLVTSLLRSIPALLNVVALLLFVFAIFGILGIQIWQGLLHAR-------CRMTPYPIQRVGGGVEGCEDPRSESCAAVVADPSKWEKCHAV-------------PEPWN--PETPWTTPVDCFWPVDDTDVFVCSMSGGGAHECRS--DRWCGSNYDINGQPRFSNA----GQDK---ATFVRDLNWGYTNFDNMFAALLTIFQMITMEGWTDVMYQVQDAHNAVVSAVYFIFLILFGSFFLLNLTLAVIWDNFS 394          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A7S2F8U8_9STRA (Hypothetical protein n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2F8U8_9STRA)

HSP 1 Score: 256 bits (655), Expect = 4.040e-72
Identity = 157/423 (37.12%), Postives = 221/423 (52.25%), Query Frame = 1
Query:   28 FLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGH--VDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGFGV-------------------YLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKLGD------CLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCS---ELSGGFYHCPS------WENKT-CGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESI 1185
            F    +  R LC  +ARSK FD FIL+ I  N++ L L DY     DDD  P+ E    N   A  +P+ TW F  E V+K +  G                      YL + WN+LDF VV  +L   I G+P +S+LR FR+LRPL+SV KFPGL+R+I  +F S   L  VV+LLTF +  FSI+    FSG+L+ R       CR+TPYP++         C D  ADCW DY+  +      + C+ D  T   +  +D+ W       +++  DC WP +  + RVCS   +  GG + C        W N T CGS++D  GN R + S  PYG  R     +     +G+  FDN   +  T+FQ  + EGW  +MY  MD+Y  V + ++FVL+++ GSF VLNLVL V+++S+
Sbjct: 1107 FFTMHSGFRSLCDLIARSKTFDNFILLCIGFNTITLTLTDYSPECCDDDGVPMDEGCALNEFNASVEPFLTWTFAFEFVVKSVAMGMNFRVKEIYHKETKTTEVINIGYLSDHWNKLDFFVVCVSLAQVIPGMPNMSVLRTFRVLRPLKSVQKFPGLKRIITGLFDSAPRLAGVVMLLTFFLIFFSIMALQSFSGVLNRR-------CRLTPYPLQFATLHDGTFCDDAYADCWEDYLTKIVTNYTNYKCI-DDWTADGSTKEDSIW-------YNSNHDCFWPANLEEGRVCSPKGDDGGGMFTCQEAETQIGWMNNTWCGSDYDSWGNPRFLDSDAPYGMPRNQGPMFSGDFNFGFTTFDNILASFTTIFQSVSMEGWTDVMYMTMDSYGVVTSFILFVLLVVLGSFFVLNLVLGVLSDSV 1514          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE)

HSP 1 Score: 227 bits (578), Expect = 5.240e-66
Identity = 150/419 (35.80%), Postives = 219/419 (52.27%), Query Frame = 1
Query:   10 AKVSLFFLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDY------QPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF----GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKLGDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCSELSG-GFYHCPSWEN-------KTCGSNFDGLGNRRLVHS---AVPYGFDRMA-SGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESIADADE 1200
            AK SL+     NP+R  C+K      FDRFIL +I++NS  LAL D+  +DDD       +P+ + S RN  + +++  FT  FT E V+K+I  GF    G YL++SWN LDF VVVTAL+  I G+                        ++++  M  S+  LV VV+LL F+ TVF I G   F+G  H+R       CR+TP+PV               +   ++ A   + CL  +V+     +D+ +W++ S SPW  P++C WP+D  DER+C+  SG G + C   E        + CGSN+D LGN R        V +G  R+  + T+  +L WGY  FDN   A +T+FQ  T EGW  I+Y+  D   P++  V F+++IL+GSF  LNL+LAV+  +     E
Sbjct:   38 AKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXQKLVVGMLRSVPQLVSVVILLQFIFTVFGIFGIQIFAGKQHSR-------CRLTPFPVN------------NSFEVGMNYAD--YRCL--SVSNFDVVDDEPSWTQ-STSPWATPRECWWPIDSEDERLCTSNSGSGKHKCEHDERYMNLSEFRWCGSNYDALGNPRFAGGMIEGVEWGSGRLTDNATFVQSLNWGYTNFDNIFVAFLTIFQSITMEGWSDILYQIKDCSLPILGDVFFIILILWGSFFTLNLLLAVLEGNFTKGKE 432          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A6A3LKQ4_9STRA (Uncharacterized protein n=14 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3LKQ4_9STRA)

HSP 1 Score: 232 bits (592), Expect = 9.470e-64
Identity = 156/403 (38.71%), Postives = 206/403 (51.12%), Query Frame = 1
Query:   31 LKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQPVTED------------SPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF---GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKL--GDCLDRQA--DCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCSE-LSGGFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITE 1179
            L R N +R  C++V     FDRFI   I++NSV LA  D+  VD   +PV+              S  N      +   T IFTSE V+KI+  G    G Y   SWN +DF ++ T+ +  I G+P VS  R F +LRPLRS+  FPG+RR+ +A+ +++  L  VV L  F   +F I+G  FFSG       ++   CR+T +PV+L  GD L      D     + N SA     A LLD        +D      +  SPW  PQ+C WPV   D R+C+E L  G Y CPS    TCGSN+D  GN R     V      M    +   L WGY  +DN G+A +T+FQ  TEEGW  IMY  MDA  P V     V +I+F S+ V+NL +AVI E
Sbjct:  823 LSRENWLRRRCIRVVSHVYFDRFITFCIVLNSVVLATTDFSVVDSKLKPVSRGKKFQNGELVDAYSFANHVSETLEFILTGIFTSECVLKIVALGVKGKGSYWSESWNVIDFTMLFTSFVAEIPGMPNVSEFRSFCVLRPLRSLKMFPGMRRLTSALLNAIPALYSVVGLQLFAFLMFGILGVEFFSG-------RMSRVCRLTEFPVRLPPGDNLRWPVTEDYLNQVLVNASAFRCLEAPLLDY-------SDQTFGFTKETSPWRTPQNCFWPVYSTDGRLCAEPLEPGGYQCPS--GSTCGSNYDTFGNPRFRDELV------MKDALHTSTLNWGYTTYDNIGRAFLTIFQSVTEEGWTLIMYMTMDASYPAVGACFAVALIVFASYFVMNLTIAVINE 1203          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: G5A1T6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A1T6_PHYSP)

HSP 1 Score: 221 bits (563), Expect = 6.190e-60
Identity = 148/409 (36.19%), Postives = 216/409 (52.81%), Query Frame = 1
Query:   10 AKVSLFFLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQPVT-----ED-------SPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF---GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKL--GDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCSEL--SGGFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITE 1179
            A+ +LF+L R N +R  C +V     F+RFIL  I +NS+ LALVD+  VDD   PV+     ED       S  N  +   +   T IFT+E ++K++  GF   G Y +++WN + F ++ ++ +  I                    ++ FPG+RR+++A+ +S+  L  VV L  F+  VF I+G   F G       +L   CR+T +PVKL  GD L        DY+  V A P A  CL DA   L    D      +  SPW  PQDC WPV  +D  +C+++  +GG +HCP+    TCGSN+D  GN R V+         M    + D L WGY  +DN G+A++T+FQ  TEEGW  +MY  MDA +P+V     V +I+F S+ V+NL +AVI++
Sbjct:   26 AEWALFWLSRENRVRRACTRVISHVYFERFILACIALNSIVLALVDFSVVDDKLNPVSHGKRFEDGQVVDAYSMANHTVEIVEHVLTTIFTTECILKVVALGFTGKGSYSRDTWNVIAFIMLFSSFVAEIPXXXXXXXXXXXXXXXXXXXLSAFPGMRRLVSALLNSLPALRSVVGLQIFVFVVFGILGIQLFGG-------RLGRVCRLTEFPVKLPAGDPLAWPVP--NDYLQQVLANPSAFRCL-DAP--LLDYTDSTPGYSKETSPWRIPQDCFWPVHYSDGLLCADMYHTGG-HHCPA--GYTCGSNYDAFGNPRFVNDRA------MQDALHTDRLNWGYTTYDNIGRALLTIFQCVTEEGWTLVMYMTMDASHPIVGACFAVSLIVFASYFVMNLTIAVISD 413          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: A0A6A3WPH2_9STRA (Uncharacterized protein n=5 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3WPH2_9STRA)

HSP 1 Score: 213 bits (542), Expect = 1.100e-58
Identity = 138/400 (34.50%), Postives = 206/400 (51.50%), Query Frame = 1
Query:   28 FLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQPVTED------------SPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF---GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKLGDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSRRSDSPWHAPQDCVWPVDEADERVCSE-LSGGFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITE 1179
            +L R N +R  C++V     F+RFI+  I VNSV LALVD+  VDD   PV+              S  N  +   +   T IFT+E ++K++  GF   G Y ++ WN +D  ++ ++ +                      S++ FPG+RR++AA+ +S+  L +VV L  F+  VF I+G   F G       ++   CR+T +PV+L   +D       DY+  V A   A  CL DA   L    D      +  SPW  PQDC WPV  +D  +C++    G +HCP+ +  TCGSN+D  GN R V+         M    + + L WGY  +DN G+A++T+FQ  TEEGW  +MY  MDA +P+V     V +I+F S+ V+NL +AVI++
Sbjct:   32 WLSRDNRVRRACVRVTSHAYFERFIVGCIAVNSVVLALVDFSVVDDKLNPVSHGKRFEGGHVVDAYSRANHTVEVVEHVLTVIFTTECILKVVALGFTGKGSYSRDPWNVIDLIMLFSSFVAEXXXXXXXXXXXXXXXXXXXXSMSAFPGMRRLVAALLNSLPALRNVVGLQMFVFVVFGILGVQLFGG-------RMSRVCRLTEFPVRLP--VDATWPVPNDYLEQVLANASAFRCL-DAP--LLDYTDSTPGYSKETSPWRIPQDCFWPVHYSDGLLCADPYHAGGHHCPAGD--TCGSNYDAFGNPRFVNERA------MQDALHTERLNWGYTTYDNIGRALLTIFQSVTEEGWTLVMYMTMDASHPIVGACFAVSLIIFASYFVMNLTIAVISD 411          
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Match: F0WCG7_9STRA (Similar to sodium channel putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WCG7_9STRA)

HSP 1 Score: 214 bits (546), Expect = 1.130e-57
Identity = 138/412 (33.50%), Postives = 210/412 (50.97%), Query Frame = 1
Query:   10 AKVSLFFLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYGHVDDDYQP------------VTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGF----GVYLQNSWNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAAMFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPYPVKLGDCLDRQADCW---TDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSR---RSDSPWHAPQDCVWPVDEADERVCSELSGGFYHCPSWENKTCGSNFDGLGNRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEGWVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITE 1179
            A  SLFF  + N +R  C+ +A S++ D  ++  I+ NS  L + D+  VD    P            V   S  N  +  ++  FT +FT E  +KII  GF    G YL+++WN LDF VV+ +L+  +                     +  PG+RR+I+A+  ++  L +VV+L  F+  +F I+G   F GL+ +R       CR+TPYP+K+    D     W   ++Y+A V + P+ + CL +     P  + +   SR   +  SPW  PQDC WP++  DE +C+  S    H  S  N  CGS++D  GN R  +  V      M    +  A  +GY  FDN G+A  T+FQ  T+EGW  IMY  MD   P+VA + FV++++F SF ++NL LAVI++
Sbjct:   84 AGTSLFFFSKQNFVRRWCINIATSRILDIVVVSAIIANSAILGITDHSVVDHHMNPSVIGYKYDNGAMVEAYSQSNWIVQSSELPFTALFTVECALKIIAMGFIRSKGAYLRDAWNVLDFVVVLMSLIGILXXXXXXXXXXXXXXXXXXXXXSMIPGMRRLISALLKALPALANVVILQLFVFLIFGILGIQLFGGLMTSR-------CRLTPYPIKMPVDKDGTYQ-WPIPSEYLAKVISDPVTYQCLNE-----PLLSHEDRSSRLYTKETSPWRFPQDCFWPINSTDETLCTFTSESGVHKCSQVN-VCGSDYDAFGNPRFKNEKV------MQKAVFSIAFDYGYTTFDNIGKAFFTIFQAITQEGWTVIMYMTMDTSQPIVASLFFVILMIFASFFLMNLTLAVISD 475          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1408.2.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2PB29_9STRA1.600e-9644.30Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
B8C0W0_THAPS1.860e-8642.38Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S1U4W8_9STRA3.950e-8242.17Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S1G9I4_9STRA3.890e-7538.85Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A7S2F8U8_9STRA4.040e-7237.12Hypothetical protein n=2 Tax=Florenciella parvula ... [more]
A0A6H5JJ68_9PHAE5.240e-6635.80Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6A3LKQ4_9STRA9.470e-6438.71Uncharacterized protein n=14 Tax=Phytophthora frag... [more]
G5A1T6_PHYSP6.190e-6036.19Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A6A3WPH2_9STRA1.100e-5834.50Uncharacterized protein n=5 Tax=Phytophthora fraga... [more]
F0WCG7_9STRA1.130e-5733.50Similar to sodium channel putative n=1 Tax=Albugo ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1408contigP-wetherbeei_contig1408:4313..6541 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog35128.Thaps22071
PFAMsGPHH,Ion_trans
Model size1263
Max annot lvl2836|Bacillariophyta
Hectar predicted targeting categorysignal anchor
Exons4
Evalue2.94e-87
EggNOG OGsKOG2301@1|root,KOG2301@2759|Eukaryota,2XE6P@2836|Bacillariophyta
DescriptionVoltage-dependent L-type calcium channel, IQ-associated
Cds size1260
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186007.9782512-CDS-P-wetherbeei_contig1408:4312..45251683186007.9782512-CDS-P-wetherbeei_contig1408:4312..4525Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1408 4313..4525 -
1683186007.988225-CDS-P-wetherbeei_contig1408:4906..53721683186007.988225-CDS-P-wetherbeei_contig1408:4906..5372Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1408 4907..5372 -
1683186007.996811-CDS-P-wetherbeei_contig1408:5686..59541683186007.996811-CDS-P-wetherbeei_contig1408:5686..5954Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1408 5687..5954 -
1683186008.0054612-CDS-P-wetherbeei_contig1408:6225..65381683186008.0054612-CDS-P-wetherbeei_contig1408:6225..6538Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1408 6226..6538 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186008.0143256-UTR-P-wetherbeei_contig1408:6538..65411683186008.0143256-UTR-P-wetherbeei_contig1408:6538..6541Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1408 6539..6541 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1408.2.2prot_P-wetherbeei_contig1408.2.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1408 4313..6538 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1408.2.2

>prot_P-wetherbeei_contig1408.2.2 ID=prot_P-wetherbeei_contig1408.2.2|Name=mRNA_P-wetherbeei_contig1408.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=420bp
MPAKVSLFFLKRGNPMRELCLKVARSKLFDRFILVVILVNSVFLALVDYG
HVDDDYQPVTEDSPRNTAIAKTDPYFTWIFTSEAVIKIIGYGFGVYLQNS
WNRLDFAVVVTALLVYIKGVPEVSILRLFRILRPLRSVAKFPGLRRVIAA
MFHSMRGLVDVVLLLTFLMTVFSIVGTSFFSGLLHNRRVKLDGGCRVTPY
PVKLGDCLDRQADCWTDYVANVSAAPLAHACLLDAVTGLPTANDDAAWSR
RSDSPWHAPQDCVWPVDEADERVCSELSGGFYHCPSWENKTCGSNFDGLG
NRRLVHSAVPYGFDRMASGTYYDALQWGYNLFDNFGQAIMTVFQVTTEEG
WVAIMYKCMDAYNPVVAVVVFVLIILFGSFIVLNLVLAVITESIADADEY
SAREKSHARKLKAAERQKKR
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mRNA from alignment at P-wetherbeei_contig1408:4313..6541-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1408.2.2 ID=mRNA_P-wetherbeei_contig1408.2.2|Name=mRNA_P-wetherbeei_contig1408.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2229bp|location=Sequence derived from alignment at P-wetherbeei_contig1408:4313..6541- (Phaeothamnion wetherbeei SAG_119_79)
CTGATGCCGGCCAAGGTCTCCCTATTCTTCCTCAAGAGAGGCAACCCTAT GCGAGAACTCTGCCTGAAGGTTGCTCGGAGCAAATTGTTTGACCGCTTCA TCCTCGTCGTAATCCTTGTGAACAGCGTCTTCCTCGCCCTTGTGGATTAC GGCCACGTCGATGACGACTACCAGCCAGTGACAGAGGACTCTCCACGCAA CACGGCAATCGCAAAAACAGATCCCTACTTCACCTGGATCTTCACGTCCG AAGCCGTGATCAAAATTATTGGTTACGGCTTTGGGGTGTACCTTCAGAAC TCCTGGAACCGATTGGGTGGGTACCGCAATATGAATCCCAATCAAGTGAA CGGGTAGCTCTTGGTGCTGACCGCTCTACTACTTGTCTATAGTTCCCTCG CGTTGCTCTGGTCGAATTGTGCCTATTGGTTGTCTTTATTTCTCCTGTTC CCATTCTGAGGCCCACGTCTTGAGAAGAGGAGTATGCAATGTCACATGGA AAAATATGAAATTCCTCCTCATTTTCGACCGCTGATAACTGGCTGCTGAT TACTGGAAACGCTCTGCGAATCGCTTTCGGTTGGCAGACTTTGCGGTTGT GGTGACAGCGCTGCTGGTCTACATCAAGGGCGTCCCGGAGGTGTCCATCC TGCGTCTCTTTCGAATCCTGCGGCCGCTGCGATCCGTGGCTAAGTTCCCA GGGCTGCGACGGGTGATCGCGGCTATGTTCCATTCGATGCGGGGTCTCGT CGACGTCGTGTTGCTGCTGACATTCCTCATGACAGTCTTCTCCATCGTTG GGACCAGCTTTTTCAGCGGGCTGCTCCACAACAGGCGAGTCAAATTAGAC GGAGGGTCTGTCTGGTCAGTCAAGCTTGCTGTGGGCATTTTTGAACGATA AAACTGGTGCCTACGCTCATGCCGGCCATACCTTTTCCGCCTCGTTGCCG AATGGCTCCTCCTGCTCCTGCAGCTATCCATATATTTCTTCCGTGGCTGG TGATTTCTCTTCTGTATGTTTATACAACGTGCTATGAGCACCAGTGTCTT TTGCCGTCAACGCGTTTCTGGTCACTAACTTTCTATTACTTTTCTCTTCT CACGGGAGCCCCCGCCCGCTGTCCCCACCCACCGATCCATGCTTGCGTCT GTGCGCTCACCCTCCGCAGGTGTCGGGTAACGCCGTACCCCGTCAAACTC GGCGACTGCCTCGACCGGCAAGCCGACTGCTGGACCGACTATGTTGCCAA CGTCTCGGCCGCTCCACTCGCCCACGCCTGCCTGCTGGACGCTGTCACCG GGCTGCCCACCGCCAACGACGACGCCGCCTGGAGCCGCCGCTCCGACAGC CCGTGGCACGCGCCGCAGGACTGCGTTTGGCCTGTCGATGAAGCCGACGA ACGGGTCTGCTCAGAGCTGTCAGGGGGTTTTTACCACTGCCCGAGCTGGG AGAACAAGACTTGCGGCAGCAACTTCGACGGACTTGGCAACCGGCGGCTG GTGCACTCGGCGGTGCCGTACGGGTTTGACCGGATGGCGAGTGGCACGTA CTATGACGCGCTGCAGTGGGGATACAACCTGTTTGACAACTTCGGGCAAG CCATCATGACTGTGTTTCAAGTCACCACCGAAGAGGTGCGTTTTCGCCCA GCGTGGGGCATGGGGTGCGACCGTCGGGCGGCTTTGATCGGTGTGGTGAG GGCATCTTTCAGGAGGACCGCTGCTTGCCAGCGGCTGTCACCGGCTGGCT GCCGCGGCCGCGTCTCCCTGCTTGCCGAAAAGGCGAGTCAGTTTTTGCTG CCGCTGGCATTGCCGCCCGTCAGCTGCCATCGGTGCCGCCCTGACCAAAC TGCCCGCCCTTACAGGAGACGAGAGTGACAATTGTCGCGCATTTCATCAC AGCTCTTGTTTAGATAACGACGTTTTAAACCCAGAACAAAAACTCATCCG ATCTCCGGCCTCCCGGTTTTCTTCTTCTCTCTTCTTATCTGTCTATTTGC TCTTGTTTCACACAAGGGGTGGGTGGCCATCATGTACAAGTGCATGGACG CCTACAACCCCGTCGTCGCCGTCGTCGTCTTCGTTCTTATCATTCTCTTC GGTTCTTTCATCGTGCTCAACCTCGTGCTGGCCGTCATCACCGAATCCAT CGCCGATGCCGACGAGTATTCGGCCCGCGAGAAGAGCCATGCCCGCAAGC TCAAGGCGGCGGAGCGCCAAAAGAAGCGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1408:4313..6541-

>mRNA_P-wetherbeei_contig1408.2.2 ID=mRNA_P-wetherbeei_contig1408.2.2|Name=mRNA_P-wetherbeei_contig1408.2.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1260bp|location=Sequence derived from alignment at P-wetherbeei_contig1408:4313..6541- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGCCAAGGTCTCCCTATTCTTCCTCAAGAGAGGCAACCCTATGCG
AGAACTCTGCCTGAAGGTTGCTCGGAGCAAATTGTTTGACCGCTTCATCC
TCGTCGTAATCCTTGTGAACAGCGTCTTCCTCGCCCTTGTGGATTACGGC
CACGTCGATGACGACTACCAGCCAGTGACAGAGGACTCTCCACGCAACAC
GGCAATCGCAAAAACAGATCCCTACTTCACCTGGATCTTCACGTCCGAAG
CCGTGATCAAAATTATTGGTTACGGCTTTGGGGTGTACCTTCAGAACTCC
TGGAACCGATTGGACTTTGCGGTTGTGGTGACAGCGCTGCTGGTCTACAT
CAAGGGCGTCCCGGAGGTGTCCATCCTGCGTCTCTTTCGAATCCTGCGGC
CGCTGCGATCCGTGGCTAAGTTCCCAGGGCTGCGACGGGTGATCGCGGCT
ATGTTCCATTCGATGCGGGGTCTCGTCGACGTCGTGTTGCTGCTGACATT
CCTCATGACAGTCTTCTCCATCGTTGGGACCAGCTTTTTCAGCGGGCTGC
TCCACAACAGGCGAGTCAAATTAGACGGAGGGTGTCGGGTAACGCCGTAC
CCCGTCAAACTCGGCGACTGCCTCGACCGGCAAGCCGACTGCTGGACCGA
CTATGTTGCCAACGTCTCGGCCGCTCCACTCGCCCACGCCTGCCTGCTGG
ACGCTGTCACCGGGCTGCCCACCGCCAACGACGACGCCGCCTGGAGCCGC
CGCTCCGACAGCCCGTGGCACGCGCCGCAGGACTGCGTTTGGCCTGTCGA
TGAAGCCGACGAACGGGTCTGCTCAGAGCTGTCAGGGGGTTTTTACCACT
GCCCGAGCTGGGAGAACAAGACTTGCGGCAGCAACTTCGACGGACTTGGC
AACCGGCGGCTGGTGCACTCGGCGGTGCCGTACGGGTTTGACCGGATGGC
GAGTGGCACGTACTATGACGCGCTGCAGTGGGGATACAACCTGTTTGACA
ACTTCGGGCAAGCCATCATGACTGTGTTTCAAGTCACCACCGAAGAGGGG
TGGGTGGCCATCATGTACAAGTGCATGGACGCCTACAACCCCGTCGTCGC
CGTCGTCGTCTTCGTTCTTATCATTCTCTTCGGTTCTTTCATCGTGCTCA
ACCTCGTGCTGGCCGTCATCACCGAATCCATCGCCGATGCCGACGAGTAT
TCGGCCCGCGAGAAGAGCCATGCCCGCAAGCTCAAGGCGGCGGAGCGCCA
AAAGAAGCGG
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