mRNA_P-wetherbeei_contig14050.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14050.1.1
Unique NamemRNA_P-wetherbeei_contig14050.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A6A5L776_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L776_LUPAL)

HSP 1 Score: 183 bits (464), Expect = 4.330e-57
Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVGFG 321
            P+ EFRYL TVIVTAAVY GF+S+LAPLLLTF+HRAGVRPYTS C FAEPCVFDKQSLPPGLCH   +A   VTL+PKLRVQFAEFLQH SLKRLGILYL TCVGFG
Sbjct:   56 PDKEFRYLRTVIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLKRLGILYLTTCVGFG 162
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A6A5KV19_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KV19_LUPAL)

HSP 1 Score: 183 bits (464), Expect = 1.600e-54
Identity = 88/107 (82.24%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVGFG 321
            P+ EFRYL TVIVTAAVY GF+S+LAPLLLTF+HRAGVRPYTS C FAEPCVFDKQSLPPGLCH   +A   VTL+PKLRVQFAEFLQH SLKRLGILYL TCVGFG
Sbjct:  140 PDKEFRYLRTVIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKILAYIGVTLLPKLRVQFAEFLQHSSLKRLGILYLTTCVGFG 246
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A2S2NGY3_SCHGA (Uncharacterized protein (Fragment) n=1 Tax=Schizaphis graminum TaxID=13262 RepID=A0A2S2NGY3_SCHGA)

HSP 1 Score: 159 bits (402), Expect = 1.160e-48
Identity = 80/107 (74.77%), Postives = 84/107 (78.50%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVGFG 321
            P+ EFRYL TVIVTAAVY GFNSELAPLLLTFRHRAGVRPYTS C FAEPCVF KQS PPGLC    +A     L+  LR  FAEFL+ GSLKRLGILY  TCVGFG
Sbjct:    1 PDKEFRYLRTVIVTAAVYRGFNSELAPLLLTFRHRAGVRPYTSSCDFAEPCVFSKQSPPPGLCPRPLLAQKPGLLLANLRRYFAEFLKCGSLKRLGILYQSTCVGFG 107
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A7S3IBR0_9CILI (Hypothetical protein (Fragment) n=1 Tax=Anophryoides haemophila TaxID=46462 RepID=A0A7S3IBR0_9CILI)

HSP 1 Score: 127 bits (320), Expect = 5.290e-36
Identity = 69/97 (71.13%), Postives = 73/97 (75.26%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLC-HST----KVALSRVTL-IPKLRVQFAEFLQHGS 273
            P+ EFRYL TVIVTAAVY GFNSELAPLLLTF+HRAGVRPYTS C FAEPCVF KQSL P LC H T    K    +V   +PKLR QFAEFL H S
Sbjct:   23 PDKEFRYLRTVIVTAAVYWGFNSELAPLLLTFQHRAGVRPYTSSCDFAEPCVFSKQSLSPSLCDHPTPTNRKSRRPKVAPHLPKLRGQFAEFLNHSS 119
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A6A5L965_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L965_LUPAL)

HSP 1 Score: 130 bits (327), Expect = 5.460e-33
Identity = 70/107 (65.42%), Postives = 75/107 (70.09%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKV-----ALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPT 306
            P+ EFRYL TVIVTAAVY GF+S+LAPLLLTF+HRAGVRPYTS C FAEPCVFDKQSLPPGLCH   +     A S VT            LQH SLKRLG L L  
Sbjct:  445 PDKEFRYLRTVIVTAAVYWGFDSKLAPLLLTFQHRAGVRPYTSSCDFAEPCVFDKQSLPPGLCHPKYLRTWGHASSEVTRA------ICRVLQHSSLKRLGTLGLSA 545
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A7VSA7_9FIRM (Uncharacterized protein n=1 Tax=[Clostridium] leptum DSM 753 TaxID=428125 RepID=A7VSA7_9FIRM)

HSP 1 Score: 119 bits (298), Expect = 2.050e-32
Identity = 67/105 (63.81%), Postives = 73/105 (69.52%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVG 315
            P+ EFRYL TVIVTAAVY GFNS LA LLLTF+HRAGV PYTS    AE CVF KQS  P  C S    +S  +L PKLR QFAEFL + S   L IL+L TCVG
Sbjct:   17 PDKEFRYLRTVIVTAAVYWGFNSMLAHLLLTFQHRAGVSPYTSSFDLAETCVFAKQSPGPIHCGS----ISGASLFPKLRDQFAEFLNYPSPVGLRILFLSTCVG 117
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A2L2YE92_PARTP (Uncharacterized protein (Fragment) n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YE92_PARTP)

HSP 1 Score: 118 bits (296), Expect = 3.780e-32
Identity = 67/109 (61.47%), Postives = 73/109 (66.97%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALS----RVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVG 315
            P+ EFRYL TVIVTAAVY  FN ELAP  L F+HRAGV PYTS   FAE CVF+KQS PP  C+   +  S    R  L+PKLR QFAEFL   SLKRL IL   T VG
Sbjct:   22 PDKEFRYLRTVIVTAAVYWDFNQELAPHHLIFQHRAGVTPYTSTFVFAECCVFNKQSQPPIFCNPFMLRCSLHTNRAHLLPKLRCQFAEFLLLSSLKRLRILISRTSVG 130
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A6A5LBS9_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LBS9_LUPAL)

HSP 1 Score: 119 bits (297), Expect = 8.570e-30
Identity = 57/69 (82.61%), Postives = 60/69 (86.96%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVA 207
            P+ EFRYL TVIVTAAVY GF+SELAPL LTF+HRAGVRPYTS C FAEPCVFDKQSLPPGLCH   VA
Sbjct:  327 PDKEFRYLRTVIVTAAVYWGFSSELAPLPLTFQHRAGVRPYTSYCYFAEPCVFDKQSLPPGLCHPIIVA 395
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: A0A077ZLA3_TRITR (Uncharacterized protein n=1 Tax=Trichuris trichiura TaxID=36087 RepID=A0A077ZLA3_TRITR)

HSP 1 Score: 115 bits (289), Expect = 9.350e-30
Identity = 64/105 (60.95%), Postives = 73/105 (69.52%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVG 315
            P+ EFRYL TVIVTAAV+ GF+S LA LLLTF+HRAGV  YTS    A+ CVF KQ L P LC S    +S   L+PKLR QFAEFL + S   L I +LPTCVG
Sbjct:  109 PDKEFRYLRTVIVTAAVHWGFDSMLAHLLLTFQHRAGVSSYTSSFDLAQTCVFGKQLLGPILCGS----ISGAPLLPKLRGQFAEFLNNPSPVGLRIFFLPTCVG 209
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BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Match: C7H9G6_FAEPA (Uncharacterized protein (Fragment) n=10 Tax=Eubacteriales TaxID=186802 RepID=C7H9G6_FAEPA)

HSP 1 Score: 115 bits (289), Expect = 2.000e-29
Identity = 64/105 (60.95%), Postives = 73/105 (69.52%), Query Frame = 1 
Query:    1 PENEFRYLMTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSLPPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVG 315
            P+ EFRYL TVIVTAAV+ GF+S LA LLLTF+HRAGV  YTS    A+ CVF KQ L P LC S    +S   L+PKLR QFAEFL + S   L I +LPTCVG
Sbjct:  144 PDKEFRYLRTVIVTAAVHWGFDSMLAHLLLTFQHRAGVSSYTSSFDLAQTCVFGKQLLGPILCGS----ISGAPLLPKLRGQFAEFLNNPSPVGLRIFFLPTCVG 244
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14050.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A5L776_LUPAL4.330e-5782.24Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A6A5KV19_LUPAL1.600e-5482.24Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A2S2NGY3_SCHGA1.160e-4874.77Uncharacterized protein (Fragment) n=1 Tax=Schizap... [more]
A0A7S3IBR0_9CILI5.290e-3671.13Hypothetical protein (Fragment) n=1 Tax=Anophryoid... [more]
A0A6A5L965_LUPAL5.460e-3365.42Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A7VSA7_9FIRM2.050e-3263.81Uncharacterized protein n=1 Tax=[Clostridium] lept... [more]
A0A2L2YE92_PARTP3.780e-3261.47Uncharacterized protein (Fragment) n=1 Tax=Paraste... [more]
A0A6A5LBS9_LUPAL8.570e-3082.61Uncharacterized protein n=1 Tax=Lupinus albus TaxI... [more]
A0A077ZLA3_TRITR9.350e-3060.95Uncharacterized protein n=1 Tax=Trichuris trichiur... [more]
C7H9G6_FAEPA2.000e-2960.95Uncharacterized protein (Fragment) n=10 Tax=Eubact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14050contigP-wetherbeei_contig14050:17..337 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1089548.KI783301_gene3307
Model size321
Max annot lvl91061|Bacilli
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.01e-33
EggNOG OGs2B9ZZ@1|root,323DM@2|Bacteria,1V6N4@1239|Firmicutes,4IRDZ@91061|Bacilli
DescriptionCOG NOG15344 non supervised orthologous group
Cds size297
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186006.8752863-UTR-P-wetherbeei_contig14050:16..401683186006.8752863-UTR-P-wetherbeei_contig14050:16..40Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig14050 17..40 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186006.888508-CDS-P-wetherbeei_contig14050:40..3371683186006.888508-CDS-P-wetherbeei_contig14050:40..337Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14050 41..337 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14050.1.1prot_P-wetherbeei_contig14050.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14050 41..337 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14050.1.1

>prot_P-wetherbeei_contig14050.1.1 ID=prot_P-wetherbeei_contig14050.1.1|Name=mRNA_P-wetherbeei_contig14050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp
MTVIVTAAVYLGFNSELAPLLLTFRHRAGVRPYTSPCGFAEPCVFDKQSL
PPGLCHSTKVALSRVTLIPKLRVQFAEFLQHGSLKRLGILYLPTCVGFG
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mRNA from alignment at P-wetherbeei_contig14050:17..337+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14050.1.1 ID=mRNA_P-wetherbeei_contig14050.1.1|Name=mRNA_P-wetherbeei_contig14050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig14050:17..337+ (Phaeothamnion wetherbeei SAG_119_79)
CCCGAAAATGAATTTCGCTATCTTATGACCGTTATAGTTACGGCCGCCGT
TTACCTGGGCTTCAATTCAGAGCTTGCACCCCTCCTTTTAACCTTCAGGC
ACCGGGCAGGCGTCAGACCCTATACGTCGCCTTGCGGCTTCGCAGAGCCC
TGTGTTTTTGATAAACAGTCGCTACCCCCTGGCTTGTGCCACTCTACAAA
GGTTGCCCTAAGCAGAGTCACGCTTATCCCGAAGTTACGCGTGCAATTTG
CCGAGTTCCTTCAGCATGGTTCTCTCAAGCGCCTTGGTATACTCTACCTG
CCCACCTGTGTCGGTTTCGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14050:17..337+

>mRNA_P-wetherbeei_contig14050.1.1 ID=mRNA_P-wetherbeei_contig14050.1.1|Name=mRNA_P-wetherbeei_contig14050.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig14050:17..337+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTCAATTCAGAGCT
TGCACCCCTCCTTTTAACCTTCAGGCACCGGGCAGGCGTCAGACCCTATA
CGTCGCCTTGCGGCTTCGCAGAGCCCTGTGTTTTTGATAAACAGTCGCTA
CCCCCTGGCTTGTGCCACTCTACAAAGGTTGCCCTAAGCAGAGTCACGCT
TATCCCGAAGTTACGCGTGCAATTTGCCGAGTTCCTTCAGCATGGTTCTC
TCAAGCGCCTTGGTATACTCTACCTGCCCACCTGTGTCGGTTTCGGG
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