mRNA_P-wetherbeei_contig14022.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: D8LMA5_ECTSI (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA5_ECTSI) HSP 1 Score: 186 bits (471), Expect = 8.880e-48 Identity = 172/461 (37.31%), Postives = 238/461 (51.63%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIGEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEWESEADGALDDGDSRDASGDXXXXXX----------RVVDDDPVEDESF--ADLFPALSAGEAASKTDGSRGASGAILPRKTAKKAENGSG----RSCVTNGSGSSAATAAEVLTEECAALERVAHYALMLKADLVAV---KAAGAEDSTA-QLLRGMSVRASRVDSEVTRRLRTLFAQIVAS--PASLTAAAAEGVAAGTRVPAVATRSGSAGAAANGIASGGEGGGASDCSSGQRGSQTALVHCLRSFAALASGAEAEREFARVVVHPFVEANLTQGRLDGGGARGSCDGLACIYNDAVAHFAAAAGVALQAAEDMF 1317
+RDDL+ HL+ Q LYDLIN+DYADF+LVS+KL+GV KV L++P+ L + ++ + E A+ ++A L ER VVR++K ++++ LRF++TL+ AE VLEIG+ AD DD D+ G+ XXX R D +DE F DL A S G A + +D A+L + A +G G ++ A+ EECA LER AHYALM+ ADL A +A GA D+ A LLRGMS RASRV++E+TRRLR+ FA ++ P T AA +G +AG + G G+GG + + AL+ CLR F+AL SG EAE++FAR V+ PF+EA T G +DG RGS GL + N+ +A+ AG A++AAEDMF
Sbjct: 41 LRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEEASRLEAKLEERRVVRERKNSVQRFLRFMSTLDTAEGVLEIGDRG-------------------------------------ADRLEDDLDTAGGGGEGGTXXXXXXXXEGARGRACWDVDEDDEGFDDPDLLAAFSGGLALATSDK------AVLSAASVPGAASGGGVEGDKAXXXXXXXXXXXXCAQ---EECALLERAAHYALMMNADLQAAAEDEANGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWPSTPAAGDGASAGNKA-------GXXXXXXXXXXXXGDGGA-------RESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGS-ERGSSKGLGPLLNELLAYVKEVAGDAVEAAEDMF 440
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A6H5JYJ6_9PHAE (Conserved oligomeric Golgi complex subunit 2 (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYJ6_9PHAE) HSP 1 Score: 179 bits (454), Expect = 1.310e-46 Identity = 179/454 (39.43%), Postives = 239/454 (52.64%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIGE-GAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEWESEADGALDDGDSRDASGDXXXXXXRVVDDDPVEDESFADLFPALSAGEAASKTDGSRGASGAILPRKTAKKAENGSGRSCVTNGSGSSAATAAEVLTEECAALERVAHYALMLKADL------VAVKAA-----GAEDSTA-QLLRGMSVRASRVDSEVTRRLRTLFAQIVAS--PASLTAAAAEGVAAGTRVPAVATRSGSAGAAANGIASGGEGGGASDCSSGQRGSQTALVHCLRSFAALASGAEAEREFARVVVHPFVEANLTQGRLDGGGARGSCDGLACIYNDAVAHFAAAAGVALQAAEDMF 1317
+RDDL+ HL+ Q LYDLIN+DYADF+LVS+KL+GV KV L++P+ L + ++ + E +A+ ++A L ER +VR++K ++R+ LRF++TL+ AE VL IG+ GA XXXXXXXXXXXXXXXX G V +DD D+ DL A S G A + +D +L + A +G T AA EECA LER AHYALM+ ADL V V AA GA D+ A LLRGMS RASRV++E+TRRLR+ FA ++ P T AA +G +AG G + + AL+ CLR F+AL SG EAE++FAR V+ PF+EA T G +DG RGS GL + N+ +A+ AG A++AAEDMF
Sbjct: 40 LRDDLQEHLADRKQELYDLINRDYADFILVSTKLSGVGSKVSHLREPMARLLARASGLRVSAEEAASRLEAKLEERRIVRERKNSVRRFLRFMSTLDTAEGVLGIGDMGADRLDDDLDAAGGXXXXXXXXXXXXXXXX-----------------------GSRGRSCWDVDEDDEGFDDP--DLLAAFSGGLALTTSDKD------VLSAPSVPGAASGGVEGDKTREEEEELRAAASRAQEECALLERAAHYALMMNADLQVGSLLVLVAAAEDEANGAGDADATSLLRGMSSRASRVEAEITRRLRSEFASLLKPRHPWPSTPAAGDGASAGNXXXXXXXXXXXXXXXXXGA---------------RESRRQALLSCLRPFSALGSGIEAEKQFARAVMQPFLEARFTPGIVDGS-ERGSSKGLGPLLNELLAYVKEVAGDAVEAAEDMF 446
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A835ZA59_9STRA (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA59_9STRA) HSP 1 Score: 128 bits (321), Expect = 4.060e-28 Identity = 132/445 (29.66%), Postives = 193/445 (43.37%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIGEGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAEWESEADGALDDGDSRDASGDXXXXXXRVVDDDPVEDESFADLFPALSAGEAASKTDGSRGASGAILPRKTAKKAENGSGRSCVTNGSGSSAATAAEVLTEECAALERVAHYALMLKADLVAVKAA------GAEDSTAQLLRGMSVRASRVDSEVTRRLRTLFAQIVASPASLTAAAAEGVAAGTRVPAVATRSGSAGAAANGIASGGEGGGASDCSSGQRGSQTALVHCLRSFAALASGAEAEREFARVVVHPFVEANLTQGRLDGGGARGSCDGLACIYNDAVAHFAAAAGVALQAAEDMF 1317
+ + L A+L +L + LY+LIN+DYADF+LVS+KL+GV++KV +L PI + Q++A++ AL ++ LAER V+ ++R +++CLRFL +LE+AE +L I + XXXXXX W+ ++ A GD D+D +++ E C+ LER +HYALML AD A A D+ Q L GMSVRA+RV++EV +RLR F +V G+ A + CLR+FAAL G +AE+++A V V PF++ LTQGRLD G ARGSC GLA +Y++ + + A A A++AA F
Sbjct: 61 LHEQLDAYLGTLKKNLYELINRDYADFILVSTKLSGVENKVSDLATPIEALCSQIQALRAALSSELDRIEGVLAERTGVQTRRRTVKRCLRFLESLESAEMLLGISDAVPEAQDAAAAAXXXXXXTPAALPS----------WQLDSTAF--------AGGDGHASCWSDSDNDXXXXXXXXXXXXXXXXX---------------XXXXXVSRR--------------------------ELCSNLERASHYALMLNADAGMAATAEPAATTAATDTALQSLAGMSVRAARVEAEVAQRLRAAFGDLVQPXXXXXXXXXXXXXXXXXXXXX----------XXGL------------------DVEAFLACLRAFAALGCGRDAEKQYASVAVQPFLDGVLTQGRLDAG-ARGSCQGLAALYDEIIHYVATACAPAVRAAAATF 417
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A6P8HSL7_ACTTE (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8HSL7_ACTTE) HSP 1 Score: 65.9 bits (159), Expect = 8.430e-8 Identity = 35/103 (33.98%), Postives = 62/103 (60.19%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVL 309
+++DL +L SL AL +LINQDYADFV +S+ L G+ ++ L P+ +++ ++ L+ + A ++ L R ++R+KK ++ L +LE ER+L
Sbjct: 47 IKNDLEEYLKSLKAALIELINQDYADFVNLSTNLVGLDKSINNLSVPLGQLKEEVLLIRTELDGTIASIEGKLEARALLRQKKICMQHLLNITKSLEKIERLL 149
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A7M7PRZ5_STRPU (Conserved oligomeric Golgi complex subunit 2 n=2 Tax=Echinacea TaxID=7674 RepID=A0A7M7PRZ5_STRPU) HSP 1 Score: 65.9 bits (159), Expect = 8.520e-8 Identity = 35/107 (32.71%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIGE 321
+R+DL + +L A+ +LIN+DYADFV +SS L G+ + L P+ +++ +V+ A++ + DV+ +A R R+KK L++ + + ++E E +L I E
Sbjct: 47 LREDLHIYFKTLKNAMVELINKDYADFVNLSSNLVGMDKAIGNLSVPLGQLREEVMSVRCAIDEAIQDVEEKMATRNRTRQKKACLQRLMNIVKSVEKMEGILRITE 153
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A8B7YDB5_ACAPL (Conserved oligomeric Golgi complex subunit 2 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YDB5_ACAPL) HSP 1 Score: 64.7 bits (156), Expect = 2.010e-7 Identity = 35/105 (33.33%), Postives = 64/105 (60.95%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEI 315
+R+DL + SL A+ +LIN+DYADFV +SS L G+ + L P+ F +++ V++A++ + V+ +A R +R+KK L++ + ++E E +L+I
Sbjct: 49 LREDLHIYFKSLKNAMVELINKDYADFVNLSSNLVGLDKAIGNLSIPLGQFKEEVLTVRQAMDDAIRVVEEKMAARARLREKKAVLQRLINITKSVEKMESILKI 153
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: UPI0014554FC3 (conserved oligomeric Golgi complex subunit 2-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI0014554FC3) HSP 1 Score: 64.3 bits (155), Expect = 2.640e-7 Identity = 35/109 (32.11%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIGEGA 327
+R+DL + SL A+ +LIN+DYADFV +SS L G+ + L P+ F +++ +V+ A++ + V+ + R +R+KK L++ + ++E E +L+I A
Sbjct: 49 LREDLHIYFKSLKNAMVELINKDYADFVNLSSNLVGMDKVISNLSIPLGQFKEEVLSVKMAMDDAIHAVEEKMVARARIREKKATLQRLINITKSVEKMESILKIAGSA 157
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: UPI000A2A4F58 (conserved oligomeric Golgi complex subunit 2 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A4F58) HSP 1 Score: 63.9 bits (154), Expect = 3.410e-7 Identity = 35/103 (33.98%), Postives = 60/103 (58.25%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVL 309
++ DL +L SL AL +LINQDYADFV +S+ L G+ ++ L P+ +++ ++ L+ + A ++ L R +R+KK ++ L +LE ER+L
Sbjct: 47 LKQDLEEYLKSLRHALIELINQDYADFVNLSTNLVGMDKSINNLSVPLGQLKEEVLLIRTELDGTIASIEGKLDARSQLRQKKICMQHLLNITKSLEKIERLL 149
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: A0A2G8LIS4_STIJA (Conserved oligomeric Golgi complex subunit 2 n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LIS4_STIJA) HSP 1 Score: 63.5 bits (153), Expect = 3.590e-7 Identity = 34/106 (32.08%), Postives = 64/106 (60.38%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEIG 318
+R+DL + +L A+ +LIN+DYADFV +SS L G+ + L P+ +++ +VQ A++ + V+ + ER+ + +KK L++ + ++E E +L+IG
Sbjct: 45 LREDLHMYFRTLKNAMVELINKDYADFVNLSSNLVGMDKAITNLSVPLGQLKEEILSVQNAMDGAIEIVEKKMEERKQIGEKKALLQRLINIEKSVEKMELILKIG 150
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Match: UPI0018D5F53B (conserved oligomeric Golgi complex subunit 2-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D5F53B) HSP 1 Score: 63.5 bits (153), Expect = 4.670e-7 Identity = 34/105 (32.38%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 1 VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSFLKQLRAVQRALEVSAADVDAALAEREVVRKKKRALRQCLRFLTTLENAERVLEI 315
+R+DL + SL A+ +LIN+DYADFV +SS L G+ + L P+ F +++ V++ ++ + V+ +A R +R+KK L++ + ++E E +L+I
Sbjct: 49 LREDLHIYFKSLKNAMVELINKDYADFVNLSSNLVGLDKAIGNLSIPLGQFKEEVLTVRQGMDDAIRVVEEKMAARARIREKKAILQRLINITKSVEKMESILKI 153 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14022.1.1 >prot_P-wetherbeei_contig14022.1.1 ID=prot_P-wetherbeei_contig14022.1.1|Name=mRNA_P-wetherbeei_contig14022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=439bp VRDDLRAHLSSLTQALYDLINQDYADFVLVSSKLNGVKHKVDELKQPITSback to top mRNA from alignment at P-wetherbeei_contig14022:1..1721+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14022.1.1 ID=mRNA_P-wetherbeei_contig14022.1.1|Name=mRNA_P-wetherbeei_contig14022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1721bp|location=Sequence derived from alignment at P-wetherbeei_contig14022:1..1721+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14022:1..1721+ >mRNA_P-wetherbeei_contig14022.1.1 ID=mRNA_P-wetherbeei_contig14022.1.1|Name=mRNA_P-wetherbeei_contig14022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1317bp|location=Sequence derived from alignment at P-wetherbeei_contig14022:1..1721+ (Phaeothamnion wetherbeei SAG_119_79)back to top |