mRNA_P-wetherbeei_contig14006.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14006.1.1
Unique NamemRNA_P-wetherbeei_contig14006.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A127EYT0_9HYPH (Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A127EYT0_9HYPH)

HSP 1 Score: 273 bits (699), Expect = 1.100e-92
Identity = 130/146 (89.04%), Postives = 138/146 (94.52%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            M LHLIKLSVGTDSIEDLEDWI+ K KEQKKRGVKKPER HTTRMVPKR +EILDGGSI+WVIKGEILCRERILDI+PF DKDGIGRCRL+LDPKCVPVRPRPYRAFQGWRYLDPKDAPPDL+R+ RGTA +PEPLRRELRELGLL
Sbjct:    1 MSLHLIKLSVGTDSIEDLEDWIEQKRKEQKKRGVKKPERFHTTRMVPKRVDEILDGGSIYWVIKGEILCRERILDIKPFVDKDGIGRCRLILDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLDRLGRGTADLPEPLRRELRELGLL 146          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A833GCZ2_9HYPH (DUF1489 domain-containing protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GCZ2_9HYPH)

HSP 1 Score: 233 bits (595), Expect = 7.590e-77
Identity = 109/146 (74.66%), Postives = 130/146 (89.04%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            MPLHL+KLSVGT+S+E+L+ WI+ K+KE+KK+G +KPER+HTTRMVPKR +E+LDGGSI+WVI+G+I+CRER+LDIRPF D DGIGRC LVLDPKCV V PRP+RAFQGWRYL  KDAP DL+R A G A MPEP+RRELRELGLL
Sbjct:    1 MPLHLLKLSVGTESVEELQKWIRAKMKERKKKG-QKPERIHTTRMVPKRIDELLDGGSIYWVIRGQIMCRERLLDIRPFVDNDGIGRCHLVLDPKCVAVAPRPFRAFQGWRYLADKDAPRDLDRAAPGLAAMPEPMRRELRELGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A0Q7TKE3_9HYPH (Lysophospholipase n=3 Tax=unclassified Pseudolabrys TaxID=2638514 RepID=A0A0Q7TKE3_9HYPH)

HSP 1 Score: 229 bits (584), Expect = 3.720e-75
Identity = 108/146 (73.97%), Postives = 125/146 (85.62%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            MPLHLIKLSVGTDSI DL+ WI  K+K QKKRGVKKPER+HTTRMVPKRA+E+ DGGSI+WVIKG+ILCRE ILD++PFTDKDGI RC+LVLDPKC+PV PRP  AFQGWRYL+ K+ P DL + A+G   MPE +RREL +LGLL
Sbjct:    1 MPLHLIKLSVGTDSIADLQGWIDDKIKAQKKRGVKKPERIHTTRMVPKRADELKDGGSIYWVIKGQILCRETILDVQPFTDKDGIHRCKLVLDPKCIPVEPRPRSAFQGWRYLEDKETPRDLTKAAKGAIHMPEDMRRELMQLGLL 146          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A1Q4DDK0_9HYPH (Lysophospholipase n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DDK0_9HYPH)

HSP 1 Score: 223 bits (567), Expect = 1.400e-72
Identity = 108/146 (73.97%), Postives = 122/146 (83.56%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            MPLHLIKLSVG +S+ DLEDWI+ K KE+ +R  + PER HTTRM PKR +E+LDGGSI+WVIKGEILCRE+IL +RPF DKDGI RC+LVLDPKCV V PRPYRAFQGWRYL+PKDAP DL + A G A MPE LRREL ELGLL
Sbjct:    1 MPLHLIKLSVGAESVRDLEDWIEKKAKERARRK-QPPERSHTTRMTPKRVDELLDGGSIYWVIKGEILCREKILGVRPFRDKDGINRCKLVLDPKCVLVEPRPYRAFQGWRYLEPKDAPRDLGKAAPGAAAMPEKLRRELSELGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A1W7A0H3_9HYPH (Lysophospholipase n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W7A0H3_9HYPH)

HSP 1 Score: 214 bits (544), Expect = 4.480e-69
Identity = 102/146 (69.86%), Postives = 122/146 (83.56%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            MPLHLIKL+VG DSI+DL++W+  +LKE+KKRG +KPE +HTTRMVPKRA+E+ D GS++WVIKG+++CRERIL IRPF DK+GIGRC +VLD K  PV PRPYRAFQGWRYL  KD P D+ + A G A MPE LRRELRELGLL
Sbjct:    1 MPLHLIKLAVGCDSIDDLKEWVSARLKEKKKRG-QKPEHIHTTRMVPKRADELTDRGSLYWVIKGQVMCRERILAIRPFVDKEGIGRCHIVLDGKIKPVMPRPYRAFQGWRYLADKDVPEDISKAAPGVAIMPEHLRRELRELGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A1Q7BW62_9PROT (Lysophospholipase n=7 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BW62_9PROT)

HSP 1 Score: 213 bits (542), Expect = 9.030e-69
Identity = 102/146 (69.86%), Postives = 122/146 (83.56%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            M LHLIKL VG DS++DLEDWI+ KLKE++KRG+   E MH TRM PKRA+E+ DGGS++WVI+GEI+CR+RILD+RPF DK+G+GRC LVL+P+ V V PRP+RAFQGWRYL  KDAP DL+RVA G   MPE LRRELRELGLL
Sbjct:    1 MALHLIKLCVGCDSVQDLEDWIREKLKERRKRGLSS-EHMHRTRMAPKRADELRDGGSLYWVIRGEIMCRQRILDVRPFVDKEGVGRCHLVLEPRLVLVEPRPWRAFQGWRYLMVKDAPRDLDRVAPGAKNMPEALRRELRELGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A363TMD9_9BRAD (DUF1489 domain-containing protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TMD9_9BRAD)

HSP 1 Score: 206 bits (524), Expect = 4.980e-66
Identity = 99/146 (67.81%), Postives = 120/146 (82.19%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            M LHL+KL VG DS+++L+DWI+ +L E+KKRG + PE +HTTRM+PKR EE++ GGS++WVI+GEILCR+++  IRPF DKDGIGRCRLVL PK V VRPRP RAFQGWRYL  KDAP DL+R A G   MPE +RRELRELGLL
Sbjct:    1 MALHLVKLCVGCDSVKELQDWIRQRLAEKKKRG-ETPEHIHTTRMMPKRGEELVAGGSLYWVIRGEILCRQKLTAIRPFVDKDGIGRCRLVLQPKVVLVRPRPCRAFQGWRYLAEKDAPADLDRAAPGARDMPEQMRRELRELGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A6N7GSR5_9HYPH (DUF1489 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GSR5_9HYPH)

HSP 1 Score: 206 bits (523), Expect = 6.620e-66
Identity = 96/146 (65.75%), Postives = 120/146 (82.19%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            M LHLIKL VG DSI+DLEDWIK K   +K+   KK E +HTTRMVPKRA+EI+  GS+FWVI+G+++CRER+L +RPF DK+G+GRCR+VL+PK +PV PRP+RAFQGWRYL+ KDAP DL R+A G   MPE +RRELR+LGL+
Sbjct:    1 MTLHLIKLCVGCDSIQDLEDWIKEK---RKRTRSKKTEHIHTTRMVPKRADEIVGSGSLFWVIRGQVMCRERVLAVRPFVDKEGVGRCRIVLEPKVIPVEPRPWRAFQGWRYLEAKDAPRDLTRIAPGLRAMPEEMRRELRDLGLI 143          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A537N900_9PROT (DUF1489 family protein n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N900_9PROT)

HSP 1 Score: 206 bits (523), Expect = 7.070e-66
Identity = 98/146 (67.12%), Postives = 120/146 (82.19%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            M LHLIKL VG DS+ DL DWI+ KL+E+K+R +   E  H TRMVPKRA+E++DGGS++WVI+GEILCR+R+ D+RPF D DGIGRCRLVL+PK V   PRP+RAFQGWRYL+P++AP DL+R A G A MPE LRRELR+LGLL
Sbjct:    1 MALHLIKLCVGCDSVRDLRDWIREKLQEKKRRRLPL-EHWHVTRMVPKRADELIDGGSLYWVIRGEILCRQRLRDVRPFRDGDGIGRCRLVLEPKLVLTEPRPFRAFQGWRYLEPRNAPKDLDRAAPGAAAMPESLRRELRDLGLL 145          
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Match: A0A6L5FR99_9HYPH (DUF1489 family protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FR99_9HYPH)

HSP 1 Score: 204 bits (520), Expect = 1.900e-65
Identity = 95/146 (65.07%), Postives = 119/146 (81.51%), Query Frame = 1
Query:    1 MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRAEEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVRPRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL 438
            MPLHLIKL VG DS+++LE WIK ++K +K R     E +HTTRM PKRA+E+LDGGS++WVI+G ++CR++++ +RPF DK+G+GRCRLVL PK V V PRP+RAFQGWRYL  KDAPPDL+R A G A MPE LRRELR+LGLL
Sbjct:    1 MPLHLIKLCVGCDSVKELEGWIKARMKARKTRA---REHIHTTRMAPKRADELLDGGSLYWVIRGSVMCRQQLIGVRPFVDKEGVGRCRLVLKPKVVLVAPRPHRAFQGWRYLTVKDAPPDLDRAAPGAANMPETLRRELRDLGLL 143          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14006.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A127EYT0_9HYPH1.100e-9289.04Uncharacterized protein n=1 Tax=Rhodoplanes sp. Z2... [more]
A0A833GCZ2_9HYPH7.590e-7774.66DUF1489 domain-containing protein n=1 Tax=Pseudorh... [more]
A0A0Q7TKE3_9HYPH3.720e-7573.97Lysophospholipase n=3 Tax=unclassified Pseudolabry... [more]
A0A1Q4DDK0_9HYPH1.400e-7273.97Lysophospholipase n=1 Tax=Rhizobiales bacterium 64... [more]
A0A1W7A0H3_9HYPH4.480e-6969.86Lysophospholipase n=1 Tax=Pseudorhodoplanes sinusp... [more]
A0A1Q7BW62_9PROT9.030e-6969.86Lysophospholipase n=7 Tax=unclassified Alphaproteo... [more]
A0A363TMD9_9BRAD4.980e-6667.81DUF1489 domain-containing protein n=1 Tax=Bradyrhi... [more]
A0A6N7GSR5_9HYPH6.620e-6665.75DUF1489 family protein n=1 Tax=Hyphomicrobiales ba... [more]
A0A537N900_9PROT7.070e-6667.12DUF1489 family protein n=2 Tax=Alphaproteobacteria... [more]
A0A6L5FR99_9HYPH1.900e-6565.07DUF1489 family protein n=1 Tax=Hyphomicrobiales ba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14006contigP-wetherbeei_contig14006:1244..1684 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog709797.CSIRO_3389
Preferred nameMA20_36070
PFAMsDUF1489
Model size441
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.34e-66
EggNOG OGsCOG5458@1|root,COG5458@2|Bacteria,1N054@1224|Proteobacteria,2UBY1@28211|Alphaproteobacteria,3JSUQ@41294|Bradyrhizobiaceae
DescriptionProtein of unknown function (DUF1489)
Cds size441
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186005.30042-CDS-P-wetherbeei_contig14006:1243..16841683186005.30042-CDS-P-wetherbeei_contig14006:1243..1684Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14006 1244..1684 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14006.1.1prot_P-wetherbeei_contig14006.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14006 1244..1684 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14006.1.1

>prot_P-wetherbeei_contig14006.1.1 ID=prot_P-wetherbeei_contig14006.1.1|Name=mRNA_P-wetherbeei_contig14006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=147bp
MPLHLIKLSVGTDSIEDLEDWIKLKLKEQKKRGVKKPERMHTTRMVPKRA
EEILDGGSIFWVIKGEILCRERILDIRPFTDKDGIGRCRLVLDPKCVPVR
PRPYRAFQGWRYLDPKDAPPDLERVARGTAKMPEPLRRELRELGLL*
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mRNA from alignment at P-wetherbeei_contig14006:1244..1684+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14006.1.1 ID=mRNA_P-wetherbeei_contig14006.1.1|Name=mRNA_P-wetherbeei_contig14006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig14006:1244..1684+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCACTTCACCTCATCAAGCTCAGTGTCGGCACCGACTCCATCGAGGA TCTCGAGGATTGGATCAAGCTGAAGCTCAAGGAACAGAAGAAGCGCGGCG TGAAAAAGCCCGAGCGCATGCACACTACGCGCATGGTGCCCAAGCGCGCG GAAGAAATCCTCGATGGCGGCTCGATCTTCTGGGTGATCAAGGGCGAGAT CCTCTGCCGCGAGCGCATTCTCGACATCCGCCCGTTCACCGACAAAGACG GCATCGGCCGTTGCCGGCTGGTGCTCGATCCTAAATGCGTGCCGGTGCGG CCGCGGCCTTATCGGGCGTTCCAGGGCTGGCGCTATCTCGACCCCAAGGA TGCACCGCCCGATCTCGAACGCGTCGCGCGCGGCACCGCGAAGATGCCCG AGCCGCTGCGCCGTGAGTTGCGGGAGCTGGGGCTGCTTTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14006:1244..1684+

>mRNA_P-wetherbeei_contig14006.1.1 ID=mRNA_P-wetherbeei_contig14006.1.1|Name=mRNA_P-wetherbeei_contig14006.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=441bp|location=Sequence derived from alignment at P-wetherbeei_contig14006:1244..1684+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCACTTCACCTCATCAAGCTCAGTGTCGGCACCGACTCCATCGAGGA
TCTCGAGGATTGGATCAAGCTGAAGCTCAAGGAACAGAAGAAGCGCGGCG
TGAAAAAGCCCGAGCGCATGCACACTACGCGCATGGTGCCCAAGCGCGCG
GAAGAAATCCTCGATGGCGGCTCGATCTTCTGGGTGATCAAGGGCGAGAT
CCTCTGCCGCGAGCGCATTCTCGACATCCGCCCGTTCACCGACAAAGACG
GCATCGGCCGTTGCCGGCTGGTGCTCGATCCTAAATGCGTGCCGGTGCGG
CCGCGGCCTTATCGGGCGTTCCAGGGCTGGCGCTATCTCGACCCCAAGGA
TGCACCGCCCGATCTCGAACGCGTCGCGCGCGGCACCGCGAAGATGCCCG
AGCCGCTGCGCCGTGAGTTGCGGGAGCTGGGGCTGCTTTAG
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