mRNA_P-wetherbeei_contig14001.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A835YRW5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRW5_9STRA) HSP 1 Score: 151 bits (381), Expect = 9.470e-45 Identity = 64/123 (52.03%), Postives = 82/123 (66.67%), Query Frame = 1
Query: 1 HPLRMAEWELDVRTHCGFRRMSAGIRFGHDGDLVTDDGLPGNWWFGIGGLHWEVVR-DGVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDTADTSYQHR 366
HPLR AEW + R GF+R F DG + + G WWF +GGLHWE+ H++AELHWN+FG++PRM RGTV RDR +PPWL RPV++TFTG G+G+DTADT+Y+HR
Sbjct: 9 HPLRTAEWRMSTRKLLGFKREDEYFTFHKDGTVESPGKADGRWWFDVGGLHWELKEPSATATHYRAELHWNIFGTQPRMFRGTVTRDRSPSSFMPPWLLRPVISTFTGYGIGDDTADTTYKHR 131
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: D7FGX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGX5_ECTSI) HSP 1 Score: 153 bits (386), Expect = 1.410e-44 Identity = 70/126 (55.56%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 1 HPLRMAEWELDVRTHCGFRRMSAGIRFGHDGDLVTDDGLPGNWWFGIGGLHWEV---VRDG-VLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDTADTSYQHR 366
HPLR +W L +R+ RR + F +G + ++DG G WWF +GGL+W+V +R + HHKAELHWNVFGS+PRM RGT+ RDR PLPPWLFRPVV +F G GVG+DTADTSY+HR
Sbjct: 65 HPLRTQDWTLQIRSSPWTRREQE-VTFHRNGTMSSNDGNKGEWWFDVGGLYWDVNTTIRAAPTVLHHKAELHWNVFGSQPRMFRGTITRDRLPNSPLPPWLFRPVVGSFIGSGVGDDTADTSYRHR 189
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A0G4EMR7_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EMR7_VITBC) HSP 1 Score: 128 bits (321), Expect = 4.470e-35 Identity = 63/122 (51.64%), Postives = 74/122 (60.66%), Query Frame = 1
Query: 1 HPLRMAEWELDVRTHCGFRRMSAGIRFGHDGDLVTDDGLPGNWWFGIGGLHWEVVRDGVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDTADTSYQHR 366
HPLRM EW+L VR RR I F DG L T DG G W G+ WE + D H + AE+HWNVFGS+PRM +G + RDRR P+ LFRPV+ TFTG G G DTAD SY+ R
Sbjct: 61 HPLRMEEWKLRVRRGLFRRRSEMRINFRRDGSLQTSDGHKGEWRLDKFGVMWEFLVDNTTHRYMAEVHWNVFGSQPRMYKGVITRDRR--APIRADLFRPVIGTFTGIGCGTDTADVSYRDR 180
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A7S2V1B7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1B7_9STRA) HSP 1 Score: 116 bits (290), Expect = 4.870e-30 Identity = 60/119 (50.42%), Postives = 76/119 (63.87%), Query Frame = 1
Query: 4 PLRMAEWELDVRTHCGFRRMSAGIRFGHDG------DLVTDDGLPGNWWFGIGGLHWEVVRDGVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDT 342
PLRM +WE+ RT R+ S+ I+F H G DL TD+G G+W GL W++ R+GV + + A +H N FG+ P+M RG V+RDR LPPWLFRPVVATF G GVGEDT
Sbjct: 78 PLRMEKWEIIFRTGLSERKQSS-IQFYHTGGEDDKGDLRTDEGETGDWAMEKLGLQWQIRRNGVAYTYYALVHHNTFGAAPKMFRGVVVRDRFASSFLPPWLFRPVVATFHGHGVGEDT 195
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A4D9CXA1_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CXA1_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.870e-18 Identity = 38/76 (50.00%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 115 LPGNWWFGIGGLHWEVVRDGVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDT 342
L G W + GL+WE+ G+ + + AEL W+ FG P+M G V+R+R G PLPPWL RPVV TF+G G G DT
Sbjct: 68 LQGKWKYDKYGLNWELEEGGLRYFYHAELIWHSFGDRPKMHCGVVVRNRGPGSPLPPWLLRPVVGTFSGLGNGTDT 143
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: S6BHP4_BABBO (Signal peptide-containing protein n=1 Tax=Babesia bovis TaxID=5865 RepID=S6BHP4_BABBO) HSP 1 Score: 84.3 bits (207), Expect = 2.000e-17 Identity = 45/118 (38.14%), Postives = 61/118 (51.69%), Query Frame = 1
Query: 1 HPLRMAEWELDVRTHCGF-----RRMSAGIRFGHDGDLVTDDGLPGNWWFGIGGLHWEVVRD---GVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGV 330
HPLR +W + ++ GF + I F +G L T G G WW+ G ++W++ D V + A+ WN FG M RG V +DR G LP +LFRPVVA FTG G+
Sbjct: 121 HPLRHQKWVITLQKKRGFFGLKYQTEQIVIDFMDNGVLKTQQGQNGIWWYEYGNINWKIYMDPSVNVATYFTAQFCWNNFGKSAFMRRGVVYQDRPPNGWLPQYLFRPVVAKFTGEGI 238
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A7S3L6L4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6L4_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 3.550e-12 Identity = 48/124 (38.71%), Postives = 63/124 (50.81%), Query Frame = 1
Query: 1 HPLRMAEWELDVRTHCGFRRMSAGIRFGHDG--DLVTDDGLP---GNWWFGIGGLHWEVV---RDGVLHHHKAELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDTAD 348
H LR W+L V+ R F +G +++ D G W GL W + +D V+ H +L N FG +P+++RG VLR+ RR W FRPVVATFTG G GEDTAD
Sbjct: 100 HKLRTDRWQLHVQWRGKRIRERLEFEFSENGFVRMISADNATAAIGQWELASHGLTWTLPMPDQDRVIFH--GDLLLNPFGPQPKIIRGIVLRETRRV-----W-FRPVVATFTGDGTGEDTAD 215
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A7S0CI14_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CI14_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 2.460e-11 Identity = 43/112 (38.39%), Postives = 51/112 (45.54%), Query Frame = 1
Query: 121 GNWWFGIGGLHWEVVRDGVLHHHK------------------------------AELHWNVFGSEPRMLRGTVLRDRRRGGPLPPWLFRPVVATFTGRGVGEDTADTSYQHR 366
G WW G + WE+ V+HH K AELH N FG +P + +G V RDR R LP LFRPVVATF+ GVG+DT Y HR
Sbjct: 259 GKWWCQHGKVLWEIP---VIHHLKQDELNHNDDDHIKQACIKLSRRPYTRLQFSAELHLNKFGDQPILRKGVVTRDRFRSSFLPHNLFRPVVATFSAVGVGQDTLRLDYTHR 367
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Match: A0A7S1D458_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D458_CYCTE) HSP 1 Score: 58.9 bits (141), Expect = 9.990e-8 Identity = 33/71 (46.48%), Postives = 44/71 (61.97%), Query Frame = 1
Query: 187 HKAELHWNVFGSEPRMLRGTVLRDRR--------RGGPLPPWLFRPVVATFTGRGVGEDTADTSYQHRGFG 375
+ A++ N FG++P+M+RG V DRR R L W FRPV+ TFT G+G+DTAD SYQ+R G
Sbjct: 225 YHADVILNPFGAQPKMVRGIVTCDRRPQQGRRRFRFLSLQCW-FRPVIGTFTAVGIGQDTADLSYQNRPMG 294 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14001.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig14001.1.1 >prot_P-wetherbeei_contig14001.1.1 ID=prot_P-wetherbeei_contig14001.1.1|Name=mRNA_P-wetherbeei_contig14001.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=121bp MAEWELDVRTHCGFRRMSAGIRFGHDGDLVTDDGLPGNWWFGIGGLHWEVback to top mRNA from alignment at P-wetherbeei_contig14001:168..954+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig14001.1.1 ID=mRNA_P-wetherbeei_contig14001.1.1|Name=mRNA_P-wetherbeei_contig14001.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=787bp|location=Sequence derived from alignment at P-wetherbeei_contig14001:168..954+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig14001:168..954+ >mRNA_P-wetherbeei_contig14001.1.1 ID=mRNA_P-wetherbeei_contig14001.1.1|Name=mRNA_P-wetherbeei_contig14001.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig14001:168..954+ (Phaeothamnion wetherbeei SAG_119_79)back to top |