mRNA_P-wetherbeei_contig14000.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig14000.1.1
Unique NamemRNA_P-wetherbeei_contig14000.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7S4D643_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D643_HETAK)

HSP 1 Score: 141 bits (355), Expect = 6.440e-38
Identity = 81/173 (46.82%), Postives = 97/173 (56.07%), Query Frame = 1
Query:   19 LEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGR-AELRLSDHKPVYAQFQARL 534
            + I DHD+ FW GDLNYRID+ +P + V EKV   D  YL D DQL   R AG AF GF EA + FAPTYKY PGTDA+D +                                       +KK RAPAWCDRVLW  AKD +  +T L+YGR A+L++SDHKPV A+F A L
Sbjct:    8 VRIMDHDVVFWMGDLNYRIDMALPKEAVDEKVDAGDLAYLRDLDQLNQGRAAGRAFAGFEEAPLTFAPTYKYQPGTDAYDRRP--------------------------------------EKKQRAPAWCDRVLW-WAKDKS-SITQLSYGRCAQLKMSDHKPVGAEFAAAL 140          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7R9VEQ0_9STRA (Hypothetical protein n=2 Tax=Eupodiscales TaxID=33838 RepID=A0A7R9VEQ0_9STRA)

HSP 1 Score: 122 bits (306), Expect = 5.250e-29
Identity = 66/174 (37.93%), Postives = 87/174 (50.00%), Query Frame = 1
Query:    1 ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQF 522
            A+    + I DHD+AFW GDLNYR+D ++PT+ V E  +  +   L+  DQL + R  G  F GF E  + F PTYKY PGTD ++ +                                       DKK RAPAWCDR+LW   + +   VT L+Y R+EL +SDHKPV   F
Sbjct:  347 ATGTSSVGIADHDLAFWMGDLNYRVDEQIPTEKVIELSQKSELEELIANDQLNIERSQGRVFQGFEEGVLTFQPTYKYQPGTDLYEQRP--------------------------------------DKKLRAPAWCDRILWLAQEPSH--VTQLSYKRSELNISDHKPVMGTF 480          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A4D9D9A4_9STRA (Rho-GAP domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D9A4_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.490e-28
Identity = 67/167 (40.12%), Postives = 85/167 (50.90%), Query Frame = 1
Query:   19 LEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQ 519
            + I DHD+ F+ GDLNYR+D  V T+  F K+K HD  +L   DQL + R  G  F GFSE+ + F PTYKY PGT +++ +                                       +KK R PAWCDR+LWR  +     V  L+Y RAEL LSDHKPV AQ
Sbjct:  258 ISILDHDVVFFMGDLNYRLDESVDTEECFAKLKAHDLDFLQRYDQLNMERIQGRVFSGFSESPLNFLPTYKYQPGTSSYERRP--------------------------------------EKKLRCPAWCDRILWRAKEPEQ--VRCLSYRRAELGLSDHKPVAAQ 384          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: B8BUP8_THAPS (Phosphoinositide 5-phosphatase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BUP8_THAPS)

HSP 1 Score: 115 bits (287), Expect = 1.880e-26
Identity = 63/174 (36.21%), Postives = 83/174 (47.70%), Query Frame = 1
Query:    1 ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQF 522
            A+    + + DHD+ FWFGDLNYR+D  +PT+ V E  + +    L++ DQL + R  G  F  F E  + F PTYKY PGTD ++ +                                       DKK RAPAWCDR+LW   +     V  L Y R+EL  SDHKPV + F
Sbjct:  376 ATGTNSVGVSDHDLVFWFGDLNYRVDESIPTERVMELSEKNLLEELIEHDQLNVERAQGRVFQDFEEGPLNFQPTYKYQPGTDLYEKRP--------------------------------------DKKLRAPAWCDRILWLAQEPGH--VAQLNYTRSELNCSDHKPVMSTF 509          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7S2VYZ6_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2VYZ6_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.200e-25
Identity = 65/169 (38.46%), Postives = 85/169 (50.30%), Query Frame = 1
Query:   19 LEIPDHDMAFWFGDLNYRIDVEVPTDTVFE-KVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQF 522
            + + DHD++FW GDLNYR+D  + T+ V     KGH  + L+  DQL + R AG  F  + E  I F PTYKY PGTD++D +                                       DKK RAPAWCDRVLW   + +   V  L+Y R+EL +SDHKPV + F
Sbjct:  380 VTLADHDLSFWMGDLNYRVDESISTENVIALSEKGHLDQ-LIANDQLNIERAAGRVFNKWDEGSIDFKPTYKYQPGTDSYDKRP--------------------------------------DKKIRAPAWCDRVLWLAQEPSH--VAQLSYTRSELNISDHKPVMSTF 507          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A1E7EW08_9STRA (DNase I-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EW08_9STRA)

HSP 1 Score: 112 bits (280), Expect = 1.560e-25
Identity = 66/173 (38.15%), Postives = 82/173 (47.40%), Query Frame = 1
Query:    1 ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAEL-RLSDHKPVYA 516
            A  +  + I DHD+ FW GDLNYRID  +PT+ V E    +    L   DQL + RR G +F GF E  + F PTYKY PGTD ++ +                                       +KK RAPAWCDR+LW    D    V  LTY R+E    SDHKPVY+
Sbjct:  221 ALGSASVSIADHDVIFWLGDLNYRIDESMPTEKVLELAVSNRLDPLRPLDQLNIERREGRSFQGFEEGALNFVPTYKYQPGTDIYEQRP--------------------------------------EKKLRAPAWCDRILWMAQSDPQ-HVQQLTYNRSETPNCSDHKPVYS 354          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A0D2UH34_CAPO3 (Phosphoinositide 5-phosphatase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2UH34_CAPO3)

HSP 1 Score: 111 bits (278), Expect = 3.140e-25
Identity = 69/170 (40.59%), Postives = 80/170 (47.06%), Query Frame = 1
Query:   25 IPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQFQARL 534
            I +HD+ FW GD NYRID+  P + V   VK  D   L + DQL++ R  G  F GF EA I F PTYKY   +D FDT +                                        K RAPAWCDRVLWR        V  LTY RAEL+ SDH+PVYA F   L
Sbjct:  666 INNHDIVFWIGDFNYRIDL--PKEEVEGCVKNGDLATLYEADQLRIQRENGAVFAGFVEAPIIFVPTYKYDLYSDVFDTSE----------------------------------------KARAPAWCDRVLWR-----GENVDVLTYNRAELKSSDHRPVYATFDLTL 788          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7S1VW78_9STRA (Hypothetical protein (Fragment) n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VW78_9STRA)

HSP 1 Score: 110 bits (274), Expect = 8.800e-25
Identity = 66/172 (38.37%), Postives = 84/172 (48.84%), Query Frame = 1
Query:    1 ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAEL-RLSDHKPVY 513
            A+ +  + I DHD+ FW GDLNYRID  + T+ V +  + +D   L   DQL + R AG +F GF E  + F PTYKY PGTD ++ +                                       DKK RAPAWCDRVLW   + A   V  LTY R+E   +SDHK VY
Sbjct:  182 ATGSSSVGIQDHDIVFWIGDLNYRIDESMTTEKVLDLSEKNDLDELRTLDQLNVERAAGRSFQGFEEGVLRFRPTYKYQPGTDVYEQRP--------------------------------------DKKLRAPAWCDRVLWLAQEPAH--VQQLTYARSETPNISDHKAVY 313          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7S2XI26_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XI26_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.040e-24
Identity = 62/174 (35.63%), Postives = 82/174 (47.13%), Query Frame = 1
Query:    1 ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQF 522
            A+ +  + + DH++ FW GDLNYRID  + T+ V    +      L   DQL + R  G  F GF+E  + FAPTYKY PGTD ++ +                                       DKK RAPAWCDR+LW   + A   +  L Y R+EL  SDHKPV + F
Sbjct:   72 ATGSSSVGVADHNLVFWIGDLNYRIDESLSTERVLGLSEKRQFDELRSMDQLNIERAKGRVFQGFNEGILNFAPTYKYQPGTDMYEQRP--------------------------------------DKKLRAPAWCDRILWMAQEHAH--IQQLNYLRSELNCSDHKPVMSTF 205          
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Match: A0A7M3S7J5_9STRA (Putative inositol polyphosphate 5-phosphatase (Fragment) n=1 Tax=Globisporangium nunn TaxID=82942 RepID=A0A7M3S7J5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 3.440e-24
Identity = 63/170 (37.06%), Postives = 78/170 (45.88%), Query Frame = 1
Query:   16 ELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRDQLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSXXXXXXXXXXXXXXATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAALGVTALTYGRAELRLSDHKPVYAQFQ 525
            E  I +HD  FW GDLNYRI+ EVP + VF+  +    + LL  DQL + R+ G  F GF E  I F PTYKY  GT  ++ +                                       +KK RAPAWCDR+LWR      +     T  R  L LSDHKPV A F+
Sbjct:  142 EPPILNHDFVFWLGDLNYRINEEVPVEVVFQHAESGMFKELLRLDQLNIERKRGAVFRGFEEGAITFPPTYKYQAGTTVYEKRP--------------------------------------EKKLRAPAWCDRILWRAKNPDHVVQQNYTAVRT-LDLSDHKPVQASFE 272          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig14000.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D643_HETAK6.440e-3846.82Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7R9VEQ0_9STRA5.250e-2937.93Hypothetical protein n=2 Tax=Eupodiscales TaxID=33... [more]
A0A4D9D9A4_9STRA4.490e-2840.12Rho-GAP domain-containing protein n=4 Tax=Monodops... [more]
B8BUP8_THAPS1.880e-2636.21Phosphoinositide 5-phosphatase n=1 Tax=Thalassiosi... [more]
A0A7S2VYZ6_9STRA1.200e-2538.46Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A1E7EW08_9STRA1.560e-2538.15DNase I-like protein n=1 Tax=Fragilariopsis cylind... [more]
A0A0D2UH34_CAPO33.140e-2540.59Phosphoinositide 5-phosphatase n=1 Tax=Capsaspora ... [more]
A0A7S1VW78_9STRA8.800e-2538.37Hypothetical protein (Fragment) n=1 Tax=Grammatoph... [more]
A0A7S2XI26_9STRA2.040e-2435.63Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A7M3S7J5_9STRA3.440e-2437.06Putative inositol polyphosphate 5-phosphatase (Fra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig14000contigP-wetherbeei_contig14000:68..701 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog159749.K0SN67
PFAMsExo_endo_phos,RhoGAP
Model size534
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00078
KEGG koko:K01099
KEGG ReactionR04404,R09827
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
Exons2
Evalue4.02e-29
EggNOG OGsCOG5411@1|root,KOG0565@2759|Eukaryota,2XBNZ@2836|Bacillariophyta
EC3.1.3.36
DescriptionInositol polyphosphate phosphatase, catalytic domain homologues
Cds size534
COG categoryU
BRITEko00000,ko00001,ko01000,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186005.186832-CDS-P-wetherbeei_contig14000:67..3381683186005.186832-CDS-P-wetherbeei_contig14000:67..338Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14000 68..338 +
1683186005.2041874-CDS-P-wetherbeei_contig14000:438..7011683186005.2041874-CDS-P-wetherbeei_contig14000:438..701Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig14000 439..701 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig14000.1.1prot_P-wetherbeei_contig14000.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig14000 68..701 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig14000.1.1

>prot_P-wetherbeei_contig14000.1.1 ID=prot_P-wetherbeei_contig14000.1.1|Name=mRNA_P-wetherbeei_contig14000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=178bp
ASAAPELEIPDHDMAFWFGDLNYRIDVEVPTDTVFEKVKGHDHRYLLDRD
QLKLARRAGDAFGGFSEADIAFAPTYKYIPGTDAFDTQQVTSLHTTSTSG
AAAAADAADAADTATSRHHYASLSLIQDKKPRAPAWCDRVLWRCAKDAAL
GVTALTYGRAELRLSDHKPVYAQFQARL
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mRNA from alignment at P-wetherbeei_contig14000:68..701+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig14000.1.1 ID=mRNA_P-wetherbeei_contig14000.1.1|Name=mRNA_P-wetherbeei_contig14000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=634bp|location=Sequence derived from alignment at P-wetherbeei_contig14000:68..701+ (Phaeothamnion wetherbeei SAG_119_79)
GCGTCCGCCGCCCCGGAACTGGAAATCCCTGACCACGACATGGCGTTCTG GTTTGGGGATTTGAACTACCGGATTGACGTTGAAGTTCCGACGGATACAG TGTTCGAAAAGGTGAAGGGGCATGACCACCGCTACCTGCTGGACCGGGAC CAGCTGAAGTTGGCGCGGCGGGCTGGCGACGCCTTTGGTGGGTTCAGCGA AGCGGACATCGCGTTCGCGCCGACGTATAAGTACATTCCGGGCACGGACG CCTTCGACACGCAGCAGGTGAGTTGATGTCGGTTCCTTCCCTTTCATCTC TTCGTTTCTCTGCCTCCCTTCTTTGCCCTATTCGTGATGCGCCTTTCCAG GTGGGGCCGTCAGCCATTCAGCCAGTCTTCACACCACTTCCACTAGCGGC GCCGCTGCCGCTGCCGACGCCGCTGACGCCGCTGACACCGCTACTTCCCG TCACCACTACGCGTCGTTGTCCTTGATACAGGACAAGAAGCCGCGGGCAC CAGCGTGGTGCGACCGTGTGCTGTGGCGATGCGCCAAGGACGCGGCGCTG GGCGTGACGGCGCTGACGTATGGAAGGGCGGAGCTTCGGCTGTCGGACCA CAAGCCCGTCTACGCGCAGTTCCAGGCCCGCCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig14000:68..701+

>mRNA_P-wetherbeei_contig14000.1.1 ID=mRNA_P-wetherbeei_contig14000.1.1|Name=mRNA_P-wetherbeei_contig14000.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=534bp|location=Sequence derived from alignment at P-wetherbeei_contig14000:68..701+ (Phaeothamnion wetherbeei SAG_119_79)
GCGTCCGCCGCCCCGGAACTGGAAATCCCTGACCACGACATGGCGTTCTG
GTTTGGGGATTTGAACTACCGGATTGACGTTGAAGTTCCGACGGATACAG
TGTTCGAAAAGGTGAAGGGGCATGACCACCGCTACCTGCTGGACCGGGAC
CAGCTGAAGTTGGCGCGGCGGGCTGGCGACGCCTTTGGTGGGTTCAGCGA
AGCGGACATCGCGTTCGCGCCGACGTATAAGTACATTCCGGGCACGGACG
CCTTCGACACGCAGCAGGTGACCAGTCTTCACACCACTTCCACTAGCGGC
GCCGCTGCCGCTGCCGACGCCGCTGACGCCGCTGACACCGCTACTTCCCG
TCACCACTACGCGTCGTTGTCCTTGATACAGGACAAGAAGCCGCGGGCAC
CAGCGTGGTGCGACCGTGTGCTGTGGCGATGCGCCAAGGACGCGGCGCTG
GGCGTGACGGCGCTGACGTATGGAAGGGCGGAGCTTCGGCTGTCGGACCA
CAAGCCCGTCTACGCGCAGTTCCAGGCCCGCCTG
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